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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96476_cuf4 >transcript:BL96476_cuf4-protein ID=transcript:BL96476_cuf4-protein|Name=transcript:BL96476_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=135bp
GLLTSHLVPSYPAVSAPFYHGTTPLSLRRSVDEVATLLPMHRVIIFRNMV
FEWGVGANDFADKVAWEGVREPSDCSVSWSGSAAGSSSCTLQQATDFSRG
YKTRYGSYDLISNNCHLYVNRMMNYLVSGCSRYPA Run BLAST on NCBI mRNA from alignment at Sc0000096:105417..113319+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96476_cuf4 ID=transcript:BL96476_cuf4|Name=transcript:BL96476_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=7903bp|location=Sequence derived from alignment at Sc0000096:105417..113319+ (Branchiostoma lanceolatum)
GGACTCCTTACTTCACACCTTGTGCCGTCCTACCCAGCCGTCAGCGCTCC
ATTCTACCACGGCACCACCCCGCTGAGTCTGCGGCGGTCCGTGGACGAGG
TGGCGACCCTCCTGCCCATGCACCGCGTCATCATCTTCCGTAACATGGTC
TTCGAGTGGGGCGTCGGCGCCAACGACTTTGCAGACAAGGTAAACCAAGT
CTGTGTTTTTTATTCCCAAATGTGAATCCATTTTTTTTTACCATCCTCGT
AATTCAGTTACTACTTCAAAATACAGCCTGTCTACAATGTATATACCATC
TAGTTGTAATATCAACTTTGTAACAATCATGTTGGTCTACAACGGAATGC
AATTAACACATCTTTACACGTAGAAGAAGAACTTTATTGCGCGACAATAT
TGACGGGTACAATGTATGGCAATTTGTACATACATAACAATCGACTATTT
CTAATATTTAACAATTTCAAAGAACAAATCTATAACATGAATAACAATCG
ATCTAATAATGTGCATTCTAATGGCTAAAACAGTATACAATGTAATGATG
ACGATGATAGTATTATGTGTCAGGAATGTAAAACAGTGTCTCGTTTTTGC
ATAGAGTTGTATATAAATTGGCCTACATAGGCATATGAGCCGTCGTCAAG
AAGTCTCAATGGCCCGATTTACACACAAGTTTTTGGAGTCGACTCGGGGC
TGTGTGTGAGGAGCTTTGGGCTTCTCCGAAGTGGAGTTTTCCGACCAGAA
AACCGTCGGATGCCTGTGTGTTCTCTGTGCACAGTCCTGGCTCGACTCCA
AGCGGACTCAAAACCGCGTGTAGACGGGGCATTTGTGTCTTTATCTGTTT
GTTTTTGCGATTTCTGATATACACAGAGCAGCGTGACCATATACGTCCTT
GGCACTGTAATGTTTGGTGACGCCTCAGGTGCTAGCCATGTATGATAATA
GTTGTCTGTAGTACTGGAAGAGTTGCAAAGCATTATGGGGAACGGGATGA
AGTCTGCCATATCTCATCGCCTTTTCCATAATTGTTTGGTTGCTCATTTT
AGAAGAGTATGGTATGTAGAGACTGCGCTGGTTTACCGTTAGATTTGTCT
CAAAAGGCTAAGTTTCATTTGAAAAAGGCTCTGCTGGTTGACTAGTTATT
ATTTCCCCCCAGGTTGCCTGGGAGGGTGTCCGTGAGCCGTCCGACTGCTC
GGTGAGCTGGTCCGGCAGCGCCGCCGGTTCCTCCTCCTGTACCCTGCAGC
AGGCCACGGACTTCAGCCGCGGCTACAAGACTCGCTACGGCAGTTATGAC
CTCATCTCCAACAACTGTCATCTCTACGTCAACCGCATGATGAACTACCT
GGTCTCCGGATGCAGTCGCTACCCGGCCTAGGTCGGCAATATTCGGGGAT
CACCATCGGCTTTTCTCGGGAGTGGCCGTCGGCTGCTGCCGGGAATGGTC
GGCAAAATGTGTGCATCTACGGTGACCACATTGAAAAAAAAACATCATAC
AAATCGCCGTTTCCGATTAAGCATGCGTTTGAAATAAAGAAGGAATGAAT
CGACGTCATCTTTTGTACTTTATTGGATTCTTTCAGAGATACCATTAAAA
GAGGCAATGGCATCTGCACGAGCGAGTCACTTTGCCGCTGTTTGGACTTT
GGCCTCCGCTTTTTCAGCCAATATCTCGATATATGGGGATTTACTGTGTA
TGGTTAAGCACCCCAAGGTGACAAGGCTCGATGACTCAATATTAATAACA
GGGTGCACAATGATATTGCAAGAATCGAATATGCTTGACTTCAGGGTACA
ATCTACAAAATATGTGAAGATGAACTTAAGTTTGCCTGCTCGTTCTCTAG
TAAAATCCACTTTTATATGGTCCCCAGCGGAGATCATCATACTGCAACCG
ACGCACAGCAGGGATGGGTTTTGAAAAATTCAATTGGGGAACATATTTTT
TGGATGGGGAAGAAGATGGCTGAAATATGTTGTATTTGCTCGCAAATGAT
GCCTGTCTAGTTCATTTTTAGATTTGATAACATTGGATGGGTGGGACTGA
AGTTTGTGAACAAAGAAAGTGATCATATCAAAGTTTAAATATTTAATGCT
GCGTTGATAGGCCATGTCACAGAGTTTGGGAAAACACGTGTCACGTACAG
TCGAGCTCATATATCAGTCAACATTGTCCAGTCCGCCGGATTCCTGTGTG
TATGACTATTGTAAAGTCATGCCCAACGGGCTAACCACGGGCATACAAAT
GCGCAAGTATCAATATAGAAAACATAGTGACAGAACCTCTAACGACAATC
TAAAATATTGGTTCTAAAACCACTCTAATACAAGTTCGACTTCTTCCCGT
CCCTCAGTGATGTTAAGTATAATGGTTGAAATGGGCTTGTTTATGATAGA
CTGTTCAAAACGCATAAGAAAAACTTGCGCATGTCACAGGTATGAAAATT
CCATCATTTACCACTTAGGAATTATGGATATTTTCTATTAATTTTGACAA
TTGAGTTCCTATATTGCATGTTTGGTGTGTGTTCATGTTCCCTTGCCATA
AATTACAAATGTTTAATGATGTTACTTGTATTATGTGGTTTGACAACAGG
ATATATTCTAGTTGCTGTAATCTTTATGAAATTGACATTTAACGCCACGT
ACTGTTATTGAAACTTACTATGTGTAGAAATGACTAAAAGTTGGAGTTTT
TTTATTCGAGTTTGAAGCCACATAAAGTTTTTTGGGTGCCTATCATGGAA
AACACAGGAATTATAGAATGTTCTCATTCATTGTGCAAGTTATCACCTAA
TTTGCAAAACTTGCAACTGTACATCTCTATCTAGGCTTTCTGTATGCCCC
AAATCATGGAAGTCCGTCCTTTCTTTTTCTTTAAAAGTTTTAAACAAAAA
CATGCGTGCAGTTTCAAGAAAAACTGCTAGGGGCCCAAACCACTTTTTGC
TGACATGCTATCTGCAACTAGGGACTAGGTAACGTAACATGACCTATTTA
CGTGCGGGAGTAGTTTACGTCCAGATTGGGTCATGTCCACTTGTCGCGGT
GTATTATTCCAAAGCCTGTTCTCATGAGAAACAACAAACAAACCGACAAA
CACAACAGGTCCACTGCAGCATCAAAGGAACCCTCCAGAAGACCCATCTT
CGAACTTGGCCTTCGTCTCCCCAACAGAAACTTACCTACTAAAAATCACC
AACATCCGTCCATGGCATCAAGAGTTATATCGCCAACACCATCACTCCAC
AAATCCCGACCAAAAATATACCCTTCTGTCTACGGCGAAGGCAATAATGT
AAATGTGGAAACCAGTGTAATAGAGATGAGCTACCTGTTAATGGGTTTGA
ATACTTGTTTGACATTTGGTAGTCATTTTAGATAGAATTTTGCCACAGGC
ATAGCTGTTACGAACTTCTATTTCACTTAACTACCGTAGTGCTTCTGATT
CAATCGTGCACGTGCTTTTTCAAATTGTATGTTTAATTGCGCGTTATGTA
CATAATTACATTGATAGCATTTATAATGAACTTATTGTACACTATAGAAT
AAAGTACAAGTTAAATTTCCATTTAGGTCAACACCTTTGGTCACGTCAAC
CTGGTACTGTCAACTCGACTGTTTGTCTCAGTGTTACGGTGATTAAGACA
GTTTTTTTACTCGTCATGGCGATTAAGACACTTCCTTAGCCGTGTCATTG
GTCATGCGCCTTGAGATTTACGCCAAATACATGTATTGACAAACATTTCC
TTCAGTTTACCTCCTCAGTGTTAAGATAAAGGCGATTAGATATAGCTACG
TATACATCAAACTACGTGTATACCTAGGTATACCTATCACCTAATCCGTG
ACATACACAGTGCCGCGTTTCATTCAGACCACATGCATGAACTTCACTTC
GTGACGATTTTATTCAGCACTGTAGATAAAAATGAACATGGCTCACTTCT
GCAAAATGGGGCAATTAATCCGTCCGAAGTTACGGGACCCGCCGTTTTGT
AGCAATCACATGATACAAAATGTAATGTCATCAATGCAGTTATATAAAGC
ATGACAATACTTTATGTAACGTTACATGTATAGCTATACCTCTTTTTGAA
TGTTTGATTTATGGGGACAAGGAAATACTAGTATGCTAGCCTGATTGAAT
CGCCATAAAAGCCCTGAACTACTACACCTGTAGTATACATCATCTTCATT
TTTTTTATCATAAACTTGAATAAATTGCTTTTAATTTCCAGACAGGTGTC
GTTGATCAAGTTGTACGTTGTACATGTAGTCATCGTGAATCTATTGCAAT
GGCATAGGATACAGTGTTATGATATTTATATATCTTTGATGACAAATTTG
CACCAATGTTGAGAGTTGCCCAAAATTTGAGGCCCTTTGTATCATTTCAC
AATTTAAGTCTACACGAGGGGCAAAAGTTTGACAGGCACTTGCTACTGCT
ATTTTGGACAGCCCCTGTGCAGACGACGTCCTGGTGGATCCAAGGAACAA
GATGTTAATCACTAGCGACCCATAAGACAGTATACACTATGTATAAAGAG
ACGGATAGATAAAGATTTTGTAGACCTATATATATATATATNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGGGTTGGTGTGGGTGTGTGTGCATGATCATTCACTCAAAGAG
ACCGCTGTGGTCGAGTGTTTAAACGCTCACAATCGTCTAACCTCGACGGA
CTCCTTACTTCACACCTTGTGCCGTCCTACCCAGCCGTCAGCGCTCCATT
CTACCACGGCACCACCCCGCTGAGTCTGCGGCGGTCCGTGGACGAGGTGG
CGACCCTCCTGCCCATGCACCGCGTCATCATCTTCCGTAACATGGTCTTC
GAGTGGGGCGTCGGCGCCAACGACTTTGCAGACAAGGTAAACCAAGTCTG
TGTTTTTTATTCCCAAATGTGAATCCATTTTTTTTTACCATCCTCGTAAT
TCAGTTACTACTTCAAAATACAGCCTGTCTACAATGTATATACCATCTAG
TTGTAATATCAACTTTGTAACAATCATGTTGGTCTACAACGGAATGCAAT
TAACACATCTTTACACGTAGAAGAAGAACTTTATTGCGCGACAATATTGA
CGGGTACAATGTATGGCAATTTGTACATACATAACAATCGACTATTTCTA
ATATTTAACAATTTCAAAGAACAAATCTATAACATGAATAACAATCGATC
TAATAATGTGCATTCTAATGGCTAAAACAGTATACAATGTAATGATGACG
ATGATAGTATTATGTGTCAGGAATGTAAAACAGTGTCTCGTTTTTGCATA
GAGTTGTATATAAATTGGCCTACATAGGCATATGAGCCGTCGTCAAGAAG
TCTCAATGGCCCGATTTACACACAAGTTTTTGGAGTCGACTCGGGGCTGT
GTGTGAGGAGCTTTGGGCTTCTCCGAAGTGGAGTTTTCCGACCAGAAAAC
CGTCGGATGCCTGTGTGTTCTCTGTGCACAGTCCTGGCTCGACTCCAAGC
GGACTCAAAACCGCGTGTAGACGGGGCATTTGTGTCTTTATCTGTTTGTT
TTTGCGATTTCTGATATACACAGAGCAGCGTGACCATATACGTCCTTGGC
ACTGTAATGTTTGGTGACGCCTCAGGTGCTAGCCATGTATGATAATAGTT
GTCTGTAGTACTGGAAGAGTTGCAAAGCATTATGGGGAACGGGATGAAGT
CTGCCATATCTCATCGCCTTTTCCATAATTGTTTGGTTGCTCATTTTAGA
AGAGTATGGTATGTAGAGACTGCGCTGGTTTACCGTTAGATTTGTCTCAA
AAGGCTAAGTTTCATTTGAAAAAGGCTCTGCTGGTTGACTAGTTATTATT
TCCCCCCAGGTTGCCTGGGAGGGTGTCCGTGAGCCGTCCGACTGCTCGGT
GAGCTGGTCCGGCAGCGCCGCCGGTTCCTCCTCCTGTACCCTGCAGCAGG
CCACGGACTTCAGCCGCGGCTACAAGACTCGCTACGGCAGTTATGACCTC
ATCTCCAACAACTGTCATCTCTACGTCAACCGCATGATGAACTACCTGGT
CTCCGGATGCAGTCGCTACCCGGCCTAGGTCGGCAATATTCGGGGATCAC
CATCGGCTTTCCTCGGGAGTGGCCGTCGGCTGCTGCCGGGAATGGTCGGC
AAAATGTGTGCATCTACGGTGACCACATTGAAAAAAAAACATCATACAAA
TCGCCGTTTCCGATTAAGCATGCGTTTGAAATAAAGAAGGAATGAATCGA
CGT Coding sequence (CDS) from alignment at Sc0000096:105417..113319+ >transcript:BL96476_cuf4 ID=transcript:BL96476_cuf4|Name=transcript:BL96476_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=408bp|location=Sequence derived from alignment at Sc0000096:105417..113319+ (Branchiostoma lanceolatum)
GGACTCCTTACTTCACACCTTGTGCCGTCCTACCCAGCCGTCAGCGCTCC
ATTCTACCACGGCACCACCCCGCTGAGTCTGCGGCGGTCCGTGGACGAGG
TGGCGACCCTCCTGCCCATGCACCGCGTCATCATCTTCCGTAACATGGTC
TTCGAGTGGGGCGTCGGCGCCAACGACTTTGCAGACAAGGTTGCCTGGGA
GGGTGTCCGTGAGCCGTCCGACTGCTCGGTGAGCTGGTCCGGCAGCGCCG
CCGGTTCCTCCTCCTGTACCCTGCAGCAGGCCACGGACTTCAGCCGCGGC
TACAAGACTCGCTACGGCAGTTATGACCTCATCTCCAACAACTGTCATCT
CTACGTCAACCGCATGATGAACTACCTGGTCTCCGGATGCAGTCGCTACC
CGGCCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000096 | genome | Sc0000096:105417..113319 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96476_cuf4 |
| Biotype | protein_coding |
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