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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96480_cuf6 >transcript:BL96480_cuf6-protein ID=transcript:BL96480_cuf6-protein|Name=transcript:BL96480_cuf6|organism=Branchiostoma lanceolatum|type=polypeptide|length=144bp
MEEDALDDDEEFLPAPPDAKNVRAPAMPSSSASSRTEDLATARALRKKEL
RMSTILWDVFKHFLVVAVVFYLAFSSMDTQGYYMEKSLKSRFPTFKKVNT
FDKVWNWSSAELTKVLFARAGSTLLDDQSYRVGAAAFKQFRSRK Run BLAST on NCBI mRNA from alignment at Sc0000162:195938..197758- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96480_cuf6 ID=transcript:BL96480_cuf6|Name=transcript:BL96480_cuf6|organism=Branchiostoma lanceolatum|type=mRNA|length=1821bp|location=Sequence derived from alignment at Sc0000162:195938..197758- (Branchiostoma lanceolatum)
ATGAACTCAATGTTCATGTATCTCTACGTTGTAATTCAAGTACCGCGGAC
TTACTCAGCTGTGACAGGGACCCCCAGTTATCATCTGACAAACTCGATGA
AAGGTTCATTGAAAAGTAGATTTGTTGTTCCTTTGAAATGTCGTGATATG
TTATGATATCTGAACATGGTCATCATTGGTACCAGGACAGCTAGCGACCG
TCTTTGAAAGCAGCAACAGGCTGTATGGATGTCAACATAAAGATGTTCCA
TATCGTTTTTTCAGGTTCTACTGTTTGCCTTTATTATTGCGTTCATCTAT
AAGAAGATCGGGAAGGCTGATGTGATGGAAGAAGATGCACTTGATGACGA
CGAGGAATTTCTACCTGCACCTCCAGATGCTAGTAAGTGTTTTCGCTGTA
CACTAAACTACATTGTATATCCTAAGTATCAAATCAAGCAAAGCAATCCT
TCTTCCTGAGTGTTCATATCGTTAAGACAACACCGTAATCAACAGCACGT
GTGAAGTGCCTTTCCAAATTACACAGCACAGCATTTGGACCTGTCGAGGG
TTTGAACATAGAGCATCTCGATTATGGGGCTGCCAAACTAACCACAACAT
ATTTAGCGACGAAGATATACGTTGAAAATATTTGATGTCAAGAACATGCA
TATCATTTTGAAATGTTGGGTCTGAATCTTAAAAAAAAATCATGAATTAC
AGAAAATGTACGAGCTCCAGCAATGCCTAGCTCATCAGCCTCTAGCAGAA
CAGAAGACCTGGCCACGGCTCGCGCCTTGCGAAAGAAAGAACTTCGAATG
AGCACAATTCTATGGGACGTCTTCAAGCACTTCCTCGTCGTGGCCGTGGT
ATTTTACTTGGCCTTTAGCAGCATGGACACCCAAGGGTACTACATGGAAA
AATCGCTGAAATCTCGGTTTCCAACATTCAAAAAGGTAATCATATATATT
TTCTGTTGCTGCAAATATCAGTCGACGATCTGTTGTGGATCGAGATCAAC
TAACCATCGCCTAACTTCAGAAACGTTTATTCCAAACCGAGTGTTTGATT
TAATCTAGAACTAGTATGATATCAATGAACTGTCAGAGGTAAATCATAGG
TGAGAGGAATACCGTTACTATTGGATGAGATGTTATGTATTTGCGTTGTA
TTTTCATCAGCCTAATCACACATTGATACCGATAGAACGTCTGAGTTTTA
CGTATTAGGGACATCGGACACCGACATAGAAGCAGCTATTTGCCTGTCAG
TAAATCTTTGCTAACGCCTTTTCGGAAATCTAGAGATCTTCTGCCACTCC
CAAACAACCTCTATCAAGTGTGTTTAACTGGCTAATAGAACAGAATACAA
GAAGAGCACATAAGAATTTGCTGATAACATTAAAACAATGCAATTTGAGG
AACTCAACATGGTGGTCTGCACCTGACCACTTCATTGATATGGAACGGGA
GTGAAAAATAAAAATGTCCTATTCCCCTCAAGAGCCCGACGATATCACGC
CTGTCTTTCAGGCCGGCTCGTACGGCTCATAGTCAGAATTTAATTGCAGC
GACTTCTGCCTACAATTTGTGTCTTAATGTACTTTGATCACTTAATTTAT
TTCCTGATGTCTTCCTCAACTGCGACATTTCATTGCTTTATTTGACCATA
ACAATAAAACTGTTTTGATTGTCCCATAGGTTAATACTTTTGACAAAGTC
TGGAACTGGTCCTCCGCTGAACTGACGAAGGTTCTGTTTGCTCGGGCCGG
CAGCACGCTGCTCGATGATCAGTCGTACAGAGTTGGGGCGGCCGCGTTCA
AACAGTTTCGAAGCCGAAAAG Coding sequence (CDS) from alignment at Sc0000162:195938..197758- >transcript:BL96480_cuf6 ID=transcript:BL96480_cuf6|Name=transcript:BL96480_cuf6|organism=Branchiostoma lanceolatum|type=CDS|length=432bp|location=Sequence derived from alignment at Sc0000162:195938..197758- (Branchiostoma lanceolatum)
ATGGAAGAAGATGCACTTGATGACGACGAGGAATTTCTACCTGCACCTCC
AGATGCTAAAAATGTACGAGCTCCAGCAATGCCTAGCTCATCAGCCTCTA
GCAGAACAGAAGACCTGGCCACGGCTCGCGCCTTGCGAAAGAAAGAACTT
CGAATGAGCACAATTCTATGGGACGTCTTCAAGCACTTCCTCGTCGTGGC
CGTGGTATTTTACTTGGCCTTTAGCAGCATGGACACCCAAGGGTACTACA
TGGAAAAATCGCTGAAATCTCGGTTTCCAACATTCAAAAAGGTTAATACT
TTTGACAAAGTCTGGAACTGGTCCTCCGCTGAACTGACGAAGGTTCTGTT
TGCTCGGGCCGGCAGCACGCTGCTCGATGATCAGTCGTACAGAGTTGGGG
CGGCCGCGTTCAAACAGTTTCGAAGCCGAAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000162 | genome | Sc0000162:195938..197758 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96480_cuf6 |
| Biotype | protein_coding |
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