|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96494_cuf1 >transcript:BL96494_cuf1-protein ID=transcript:BL96494_cuf1-protein|Name=transcript:BL96494_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=160bp
SCTADQFACPCGGCCLETAQLCDRVDDCTDGSDELGCDFPTTPAATTTIA
AATTTPAVTIIIPAVTTVMATTASDNANIVTTTTPDDDTPEDPTRAPVTG
ASLTTSGPEESGSAAANTGGVPAGPVAGGVVGAVAVVGAGAAVGGYLMYK
KKQMAVDPTP Run BLAST on NCBI mRNA from alignment at Sc0000063:919526..921420+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96494_cuf1 ID=transcript:BL96494_cuf1|Name=transcript:BL96494_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1895bp|location=Sequence derived from alignment at Sc0000063:919526..921420+ (Branchiostoma lanceolatum)
CAGCTGCACGGCTGACCAGTTCGCCTGCCCGTGTGGCGGCTGTTGCCTGG
AGACGGCTCAGCTGTGTGACCGGGTGGACGACTGTACTGACGGCAGTGAT
GAGCTCGGATGTGACTGTAAGTCTTCACATTGTCGCACGACTCTAGTAGA
GGTACATTCTATAGTAGATAGATAAATATAGATACTTAAATGCCGCGTCT
ATAGTAGCTATCTTGGCTTTACTCCGGTAACAGATAATGTGTAATCATTT
AGATGCAAGCGGCAGAACAACTGTTTGGACCCTGCCACTCTGTTCCGTAT
TGTGGGGAAATAAAAAAAAGTATCATTATACCAGCATGCGCATAGCACAT
GTGTGTCGGTTTGTTGAACCAGACAGGCTCGTCCACAACTCTTGTGCTTG
TTAATCCACACAAAAACCAACGCGCGCACCCGTCTGGACATTATGTGCAT
TGTGCATTAGAAATGATTAGCAATAGTGCTAGAGGACACCAGGACGAGTT
TCTACACCTACATTCCACACACTTCATCTTCTCGTACGATTCACCTGCTT
CAGTTCCAACCACCCCGGCAGCAACAACCACCATTGCGGCTGCTACAACC
ACCCCGGCAGTTACAATCATCATCCCGGCGGTCACAACCGTCATGGCAAC
CACCGCATCAGATAACGCAAACATCGTGACAACTACGACGCCAGACGACG
ATACGCCAGAAGATCCTACCAGAGCTCCAGTGACCGGCGCCTCGCTGACT
ACCAGCGGGCCAGAGGAGAGTGGTTCCGCCGCCGCTAACACGGGTGGGGT
GCCAGCCGGGCCGGTGGCGGGCGGCGTGGTCGGCGCGGTGGCTGTGGTGG
GAGCTGGCGCCGCAGTCGGAGGGTATCTCATGTACAAGAAGAAACAAATG
GCGGTGGATCCTACACCATAACTACGGAATCGCTCCCAAATTTTACGTGC
AAACAATCAAACAATTGCAGTGAAAGGAGAGTCCATTTTGTCCCATCAGT
GTCAGAACAACTGCCACGAATCAAGAAAGGTACATAACTTCTCAATGTCT
ATCAGCAATATTAATACTTAACTGACAGTACCTAGTTAGGAAACGGAAGC
TGCTACAGCCGACACTCCTTGGTATGCGCTTTATAAGNAAAGGTACAGAA
CTTCTCAATGTCTATCAGCAATATTAATACTTAACTGACAGTACCTAGTT
AGGAAACGGAAGCTGCTACAGCCGACACTCCTTGGTATGCGCTTTATAAG
ATTGACTTGTGACATTCCAGTGTGTGACAGCAGAAGTGTGCTTGTGGTGT
GTTTGGTGTTGGATCGTATAGGGACGGCAGAGAATTAAGCTAATCTATGA
AAATGTCTCGAACATTTGGCGTGACTAAAACCGTTAACTGTGTTGGTTGT
GTAATATTAAATAGTAATATCAAAGATTGTACAGAGGTATTTCCTGTTAC
TTTTAAACTAATGCTGCGTGCTGTATATTGTGGATCTTGCATTTGCACTC
CGTTCTGTACTGTAAGGTTTCAAGAATAAGTCAAGATTGATCACGATTTG
TGTATTTACAGCGACTATATACACTTTTGTGCAGACATGAATAGTACTAT
ATGAAGATCAATGTCCCTTTATGAAAAATTGATTACGAATTACATGTATG
ATAAACTCTNAATGTCCCTTCATGAAAAATTGATTACGAATTACATGTAT
GATAAACTCTCTTAGCTGTTAACCTTTCTTTCCGCTTGCTTCATCCGGTA
TATCCCATCGATAAATTCGTTTGAGCTCAACATGTTGATCCTTGTATGTA
CTACCAGTTTAATTTACTTGTATTAACTTGTTTGTTTGTTTGTTTGTTTG
TATGTTAAGTTATGTATAGTTGGTAGAAGACATTACGAAAGTCGC Coding sequence (CDS) from alignment at Sc0000063:919526..921420+ >transcript:BL96494_cuf1 ID=transcript:BL96494_cuf1|Name=transcript:BL96494_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=483bp|location=Sequence derived from alignment at Sc0000063:919526..921420+ (Branchiostoma lanceolatum)
AGCTGCACGGCTGACCAGTTCGCCTGCCCGTGTGGCGGCTGTTGCCTGGA
GACGGCTCAGCTGTGTGACCGGGTGGACGACTGTACTGACGGCAGTGATG
AGCTCGGATGTGACTTTCCAACCACCCCGGCAGCAACAACCACCATTGCG
GCTGCTACAACCACCCCGGCAGTTACAATCATCATCCCGGCGGTCACAAC
CGTCATGGCAACCACCGCATCAGATAACGCAAACATCGTGACAACTACGA
CGCCAGACGACGATACGCCAGAAGATCCTACCAGAGCTCCAGTGACCGGC
GCCTCGCTGACTACCAGCGGGCCAGAGGAGAGTGGTTCCGCCGCCGCTAA
CACGGGTGGGGTGCCAGCCGGGCCGGTGGCGGGCGGCGTGGTCGGCGCGG
TGGCTGTGGTGGGAGCTGGCGCCGCAGTCGGAGGGTATCTCATGTACAAG
AAGAAACAAATGGCGGTGGATCCTACACCATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000063 | genome | Sc0000063:919526..921420 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96494_cuf1 |
| Biotype | protein_coding |
|
