transcript:BL96516_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96516_cuf0
Unique Nametranscript:BL96516_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96516_cuf0

>transcript:BL96516_cuf0-protein ID=transcript:BL96516_cuf0-protein|Name=transcript:BL96516_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=566bp
MFPSSETIFHALLLIAIMSADAQESGSCTEEGFGDSGCNSFRNLLSNCGH
VQTAGFPHTPYRNDIVCEWHLHVQPRHRIVMMFEHFELEESGRSCEYDKL
TVFDGVNEKAELLGIFCGTQDFLRIVSSRNHLFMRFTSDTSITTTGFHAS
YTSEVMRDVDQKTLRAIVDLGPETYPCPGAANITAGGLAAATYSAECELR
EQIALVWEPWGNISQSLVEIYESDFDSSNPVVIDDFSQDINRRLVSKGHR
LQLSLRLRQRDAGLFIQCHIEDIADKIPPCLPAVRKTSDIDTIAMNTQIS
APNIPADTDLICKVAVKTSTSRRLLTSLDLVSNPIASAQREPHGSRTRAA
LYNPERRRLLSLSSQTPLPLPTVTSQEDLLIVFWSNVVNSQWIPEVQYSP
TGCQDYSNELMKNGTTVIEDTCGIFNHHPVHGSTNFEYRIRINVKEGTYI
KVVMPPLSRYEDIRFMCKHMKYACVEDLKVYDLHGNSPVLIYSLCHQYKN
AWKTVLSSSSTLEIVYSTFCAWSRSGFILFFETSECPRMKAESCEKQIDL
PAPCGSFLPPSQGQKL
Run BLAST on NCBI

mRNA from alignment at Sc0000006:3468799..3483411+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96516_cuf0 ID=transcript:BL96516_cuf0|Name=transcript:BL96516_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=14613bp|location=Sequence derived from alignment at Sc0000006:3468799..3483411+ (Branchiostoma lanceolatum)
CGGTTGGCAGTGTGCGAATTTCCCAACCCCCAGCCGAAACTTGTCTTCAG CACTGGAACTTTGAGAACGCTGTTCAAATAAATTCCTAAGAAACCGGTCT TGTCTTGGCGACAGTACTTTAGCAGGTGACTAGGAAGGTAGAAGCTCATA GTTGCACTAGAACACTTCAAAATGTTTCCTTCATCTGAGACCATATTCCA TGCTCTGCTACTAATTGCCATAATGTCAGCTGATGCTCAAGAATCTGGTG AGTACATTCGTTCTGTTAATAGTTCGGAAAATATGTATAGATTACATTTA TGTAGTATAAAGTAGAGTGGATTCATTCCTCAAGCTAACCGACATCTTTC ACACCGCAGCCGTCCCTCAGTAAGACATCTGGAGCCGCATAGTTCCAGAT AATAGACTATTTATGTAGTTCATGTATAGGCTATGTTGAAAATGCTATTG AGATGATCCTGAAATGTTCAACATACCAGTATTAGCACAGTATGAAAACA TGAAGAATGAATTTAGTTCATTGATATTCTGTAAATCTGCTGCTGCATAG TTGTTCATTGTCATCATTGCATCGGAGGCTGAGCATAATGATTATTGAGT ACATACCTCGCTTATCAAACTTATTCGGATAAAAGCTATACGCCTCAAGC TTCTTATTTGCTGGGTCGTAGCCTTTCATACTCATGTACAACAAAAGCAG TTATATGGTGTACATTATCTTCAGTATGAAGTACTGTTATAATTCATTGG ACATAGGTCCTGTACCAGTAGCTCGGTATTCTGATACATGTATGGAAAAG ATAGATTTATTGAAAAATTAAATAGACAGATCGATCTGTTAAAGGATAGA TTAAATGATAACACGTTTACGATATATACTGGTAGCATACTATATTAGCC TTTTTGTTTAACTATTTTGTAAACGACAGATTTAGTGGTAGCATGTATAC CGATAGATTTAACCATAGAATATAGACTTTATGCTTTGTATCTACCCTTT TTTGATCAATTCAATTCAATTTAGTTTATTAAAATCAACCTCGCCGCATG AAATACAAGCTGAATTTTGCTGATTTGTACACCATAGCACCGTACACGAG AAACATCAACATTTACACATGTTACATATCAGCGAGGAAAACGTCTGCAT AAGTAGATTAACAGTAGGAGTGTTACTAAGTTTACTGGCGAAAGGCGTGG TAAAGGAACGAGTTTTTTAGTCTGTGTCTTTTTCGGTCTAACACTATACT ACATGTAATGATAGTCTTCTTGTAGTCTTTGTTTTAATAGTATGGTTACT GCATCTAGCACATATGGGCATGAAAATGCAATAAATATCCTTCAGTGAAT ACATGGTCATCACTGGGTGTCACCGGTGATAGAATAGTCTACATCATCTG AAATTTTTGTTGTTGTTGTTGCTGTTGTTCCTTTTGCTTTGTATATGGTA GTGTTACTAGTTTGGAAAATCTGTCTAGATTACATTTACGTAGTATAAAG TCGAGTGGATTCATTCCTCAAGCTGACCGACATCTTTCACACCGCAGCCG TCCCTCAGTAAGACATCTGCAGCAGTCGATTATGTACCTAAAACGCCTTT TAGGTACATAATGGCCGAATAATACGAATACGGCCAGCTCCCAGAGTTTG CAGACACTTGTGATATTTTCAGCGCACCTATCATCTTTGAAATACCAAAA TAAAATGACGCCGCATGTATCACCATCCACTTACTAAGAATCCAATGAAG AGAAATTATTAATCAATTTATGATAGATATCCGATTCTGCAAGAGACGGT TGTGGCGGAATACCGTCTAATTGTGTGGAACGAGATTTATCTTGTAAGCT ATTAACGCTGCAATGAATTTCATTTTCAAGTGATCTTACTTTAGATCTGG GGCCACTGATAGAGATAATGGTGCTTTTTTTCTCAATAATGTTGTGGTAT AAAGGGGATTCTGCATGCAATACAGCAATAAACGACAAGAGGTTCCGAGT TGTTAAAGTTCACAATACGGAACATACATCACTGTCTCAATTTGTCAACT TCAGGTGGTTTTAAATATTCATTGATAGATACGGANTGTCAACTTCAGGC GGTTTTAAATATTCATTTATAGATACGGAACGACAAAGATCAATCCAGCT ACCGACATATCGGTTTATTTGGTCATAACAACTGACCACGTGATTCTTTC AGTCTTTGGCATGTCAAGGCTGAAATCCCACCCTCTAGATACCATTCCTT TCAATCCTGTATCTGCCTGACGTATTTGCGCTACCTCTGGGTCTGGTATT GACCTTGCTGCTCTTTGACGGCAATCGATGACTCGATGGTCACTGAACAG ACCTTCACTTAGTGGCACGGTCTGCTTGCTGCCATGAGCATGACNAGCCT GACTTTCAAATCATACTTCAGACTCAAGAGTTACGGCCCATTGGAGGGCA TATTGCAAGATACCGATAATGTGCTAAAAGAGACCAAAGGATTGACAGTA ATCCATCAGTTCCGTGCCCGGACGTACGTAGATCTGTCACCGAAGGCAGT AGATGGCTGACGCATTGCCACCTACCTTAGCTGACTTCTGACATTTCTGG CTTTAGTTTTAACGTATTCCGACGTCAAGGTACAGCCTAGGGCATGAAAT GGATCTGTCGGATTTCCATTTCGATGAGAACACTGGCAACACGGCTAAGT ATACTGTCAGGATGTGCCTTGTGGATGATCAAACGTCAAGCAGTCATTTT GCTTGCGATTCAAACTTTGATTCTAAAAACGTCAAATTAGGCGTACGCAT TGTAGTTACTTTTGTAGATGACATGTTCTCTACACCGTTAGTGCTCAATG ATGTGTTATGCACGTTTGCTGCAATGCAATGGTTGATGGCTTTGGCAATC TAGGCAATGCGGTTGTTAAGATTCATAAACTCTTCAGTGAGGTCAATTTG TATTCATGAGGTTTACCTGGACATTCCACGCTATCTTCCTACCGAGCACG TTAGGCCATTGCTGAAGCCACCTATTTAATATGGAGTGGACAACTCTTGA ATAAAGGCGGTCTTGAAATATGCCAGCCATGATCAGTTGTTATCTGTTGA GGGCACGCATGCTGCTTCGCGACTAGCTTGCCATTCCAAACAGTGGTCTC TGTCACAAATTCATTGCAGAATACAGCGTTTCTAGTGCTCTAGTAATCCC AGTGTAACTAAATGGTCAACTGCCGGCGCCTCGGAGCTATATCCATTACC ACTCTTGAATGCGGGGTGAAATCCCGGGTCATAAGGAAGAATCGAGTGAC GATCTATTCTAACACTTCTGCTGTTACTTGCAGCCGCTTTAACTGAAGAC AGATCTACAATTCTATACATGCAATTGAGAAAATATGATCAGATGCTCAT TTCGNAATGGCCAACTGCCGGCGCCTCGGAGCTATATCCATTACCACTCT TGAATGCGGGGTGAAATCCCGGGTCATAAGGAAGAATCGAGTGACGATCT ATTCTAACACTTCTGCTGTTACTTGCAGTCGCTTTAACTGAAGACAGATC TACAATTCTATACATGCAATTGAGAAAATATGATCAGATGCTCATTTCGT GGATTATGCTTGTCATACTTACCAAATATGTACTGTTAACCACTCCCTCT GCAGTACGGTGATACACACAAAATCATGAATAGTAGGTTAGATAATGAAC GGTAAAGATACAGGCATCGAGTATCAATGCGTTTAGTGAAGTCAGGTTTA GATAAATCAACCGACGCAAGACGTTCGCATGAACGTCGATAACAAAGCTT TTGATACTTCGAATCGATAATGCTTGTGATTTTGCATTATTGAGTTCCCG ACCCCCAAAGAGGAGCACAGGTCAAGTTCTTTTCCTCGCCTGTCAACATT ACTGCACTTTACAAATTCAAAATCGCTCCAAACGAGTTAAGGGAATAAAA TTCTATCGATTGCAATACACACGTGTGCTTTACTTACGGCTAGAATTAAC TTTACGCTTTAATGGGAAGAGCTTTCTCAAGTAGACGCATAAGTCTCAAT TCTCCAGCTAGGTTTATAAACATTTCACGATGTTCACGTCGAGTTAACCG AGCTACAAGAATTTATAGCTCTGTTCTCATCATGATTTACCACTTTACAG TTGGACAACTTCCGATCAATTACAGTATCTAACATAATGACCATTAGCAG TTTACTGAGAAGATTGTATACTGAATCGTGTTTAGAACTGTGGCTATTAC CCAACTTCTAAACTTACACATCTGGTGAAAAATTTCGACAGTAACGTTTT TTTAAATTTATTTCACAATATATGGCTTGTCTTACCTGTATGTTATAAAA CTAAATCAGGCTGCTATGTGAGCGTGAAGATCACCCATTCTACAGGCCGT TATGTTGAAGCAAACATTGATGGATTGTCCAGGCATAGGAAAAATATATT GTGTTTCCAGTTACGGCCCTGAAAGAAATAGGGTCTGTAGGTAGGGATTC TCTTTTTTGCTTTTTTTTTCAGATTCCGGCCGAACAAAAATACACAAATA CATTTTAGCAATGACAATGTAAAACAGAAATGCATAAGAACACTGGTGTA TTCAACATCATATTGTAATTACGACAGATAAGCATTACACGTCAAGCACA AGTATATTGATAAACTGAACCAAGAAGTACAATATTTGCTACACATTATT ACACCAACTTTTCAAAACCCTCATCTGTTAACCTTTTATAAATACAGGAA GTATGATGTGAATTTCATCACTCAGATTGAAACTTTTGCCAGCGGCCGAC AAAAAAAAAGGCTAGCGTTGGCATTTATTTGCTGGGATCGGCCAGGTAAC CGGAAACACAGCATTTTTCTTAGGCCCTGTGTCTTCTATTTCCTGCAAAT CTCCCTAGAGCGACGTAACGTATGGGCTATCGTACCATCGACAGACGAGA TACTAGTAGTGTGAATCGCAACAAGATCCTTCTCTCAGGCGCTTGTAAAG CTGTGCCCATTTTCCCTTCCATTCTGATACGTGAGATGATAGACATTTGA CGTCACTATCTCCTCTATAAACGTGTTTCCCCATCAAGTTACGAAATCAA TTCCGAGGTTATGTTCCTAAGTGTTGCAAAATGGTGAAAGATCTGGTCAT TAACTGCGCTTCTCTCTGGAAATATCTGCATCCGTCCGTCTCAATCGATA GTGCAGCTCCGCTGCAGTATGAAATCAAGTCGATACAATCTGGGTAAGGA ATTTCACATGCAAAAGAAGATAGGTCTTTAGAATGTGCCCAAACTGACAC GTCGATACTCGGTTCCAAGATGTGACCGTGGACAATGGCATTCGTTGATT CATCTCACGTTACCCGAAAGCCAGGGGGTCACCCTGGACTGTGCACGTCC AATGGATTTAATGGACTGGAACGTAAGGGAAGGCCAGTCTTGCCGCTCAT ATTCTTCCTACATTATTCGGTTGGGAGTCGACGTCAACATGATTGGTTCA CTCGTGACAAAATAGCAGAACTTTTCTCATACATCTCTATACAATATCGG TACATGTATTTGTACGTTCAATGCCTTTTATTTCCGTTTTCTTTAGGCAC GGTTTTAAGGATTACAATTTCTACATGTTTTATATCTGAGACGCACGTAA TTATCTGACGATCTCCTTCTAGTTCATTGCTTATCGACGAGGAGATCCCC TATTGGAATTACGGAAGCGTGGTGTATTTGTACTTCGTGAGAAGTGCTAC ATAAGGATTAGGTAAAGCGAGTTTTCTTATCATGTTGAGGTATGCTCAAC CGCTTGCAGGTATATGTGATGGGTAGATACGAACTAGGCAGGCAGAAGAA CGCATAAGTCTCAATTCTCCAGGTAGAGAGTGAATGGTCATTAGTGAGTG AGTGAGTGAGTGAGTGAGTGAGTGAGGAGTGAGTGAGTGAGTGAGTGAGT GAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGCTACGAA CACTACGCTACTTTGCATTGTAAGAGAGATGGAATATGATATCTGCAATT TATTTCGTTCGTTCGATTAGATCTTTGGCTTTGTAGTACTTAGTGGCACA TAGGGCAGCAAGATTGCTTGCTGTTTCAGTAGCAGGATATATTCTTACAG CCACGTATTGGTAGCTCTTTCCTTTAGACGCACTTGAGGCACATCCTCAA ACACGGGACCTCCATTTTACGTCCCTTCCGAAAGACGGGTGCAGCCATGT CTCCTTGTCATGTTTAGGTCTTACTGAAAACAAAAAAAAATCGACGCTGC AAAAGTGTTTTAGTACCTTTACTCCTTGATAATACAATATCAAAACGCAG TTATTATTATTGCGTCAGGTAGAAACGTATACGATATTATCATATATAAT ATGAATTTTCAATCCTAAATCACGATACTTCAACGCAAGCCGTGTGGATG GAACTTCTTCCATGTGAGGAAGTACTCTGTAAAGCTGCAGTGCATGGTGT TTCCATTAAAGACACCAATAACTCAACATGAGACATGAGAGTGCAAGCAC CAAGCCTGAAATATGACAGCATATAGTCTGCGCATACCGGTGTAACGGCC TAGTGGGTAGAGTGTTCGCCTTGCAAACGGTAGGTCGTGAGTTCGAACCC CGGCCGAGTCATACCAAAGACTTTGAAAATGGTACATACTGCTTTCTCTG CTTAGCACTCAGCATTTGGGAAGTAGTATTGTGGTGTATTGTAATTAAAC ACACGCCACTACCAGTGGACTTGCCCCATGCTGTAGTGATTGCACAAAGT TGTGTGTCCCAAGGGCTGCCGAAACGGAGATGGGCGCCGCCCTATGCACC ACTGGTGCTTTAGCTTAACTTAAATAGTCTGCGTGTTTTCTGTCTGATTA TTTTCCACTAACCTAAACTATTGACAGCAAATAAATATAATTGTTAAAGA AAATATACAACATCATCAGTCGTTACATTTTGTATATTGCATGTAAAATG TTGCCTGTTACTCTCATCCTACACAACAAGTGGTATAAAAAGATTTTCTC CAGCACCGGTCGTACAAGTGTAGTCACTGTCAAAGAAATATTTCATCAGA AATGCCCCTGCAGTTCCAGAGCAACCTGCTAGGGGACCCAAACTTACACC AAAAGCTATCAGCCACCCAAAAAAAACATAACATGTCCATGACAAATGAT ACAAAAAAACAGATGTTCTGCTGCAGTGCCAAAGTCATACACCATGGGGC CCCAAATCAACTATGACCAACGTCTTGCCAACACCTACCCACATCCAAAA CATCATCACAATCCATCCAGAAGTTCTTAAGTTATGCCGACAACGCCAAA AACTATACCTCCATTTTTCATGAGGTTATGTACTTAATACGGGCACATAT AGGTGTGCTGTATATCACCAGAAACTACGGCTCTTTTCAAATGTGCTTGT TTCATTTCAGCCCAATGGTGCGCAGCATGTTACATGTCCGGATGAACAAC AGTGGTGAATAATGTCCCTTTCTCTTCACAGCGAGAAAATAGCCTGCACA GAAGCTGATAAGATTGTTTGCCTTAGCCGCAACACGAATATGAATGTCAC ACCAAGATAGGTACTCTTTGCATCGGCATACGAAGGTTATGAAATGTCAT AGATATTTTATTGTTTCGGTGGAGATGATTTACTATACTACGTCATACGT TTTCCTGCTGACTGCGCACATTCGTGTCCTCGCATATAGATAAAAATGTT GTCTCCTCTATTTAGTAATTTGAACATAAACGTTTCCTTCTTGATAAAGT AGAATCTTGTATCAGAAAAATACTATAGATTTGTTCTGTTCGTTTTATTC TGTACTTTTTACATTCCCTTTATGCATTCCAGGATCTAGGATTACGTTTG CTAGATGCTTTACGTTTGTGACATTTTGAGAGTTAAGCTCACTACCTCCT TCTAGTTCACTGCTTATCGACGAGGTGACCCCCTTTAAAATCACGGAAGC GTGGTTTACTTGTGCGAAGTGCTTGTGGATTACTACCTGTAATGGTGGCA TTTTCTTAAGTGTGTGTGGTGTGAGGGGTGCATCTTATAGAGGTATTTAT ACACGTGTTTGCCCCCTTCTCTTGTATTGTGATTGATTGAAATAAAGTAA ACATGAAAATATAATCAGCAAAGTTGATCTGTAATTTTCAAATTTGGACA TATAGCATTCCAAATTGTAAACTTTCCAGTCTTTGTCAATTGTGTTCGTG ATGGTGAATTTTCGATTAACCTAAGGTCATACCAAATGCCTGTCGTCAGA ATACACGTTAGTTGGTCCTTTGCAGAAAATTGATTTGATGTTCATGTAAC TGAACCTCGGCACTAGTAAACCCCCCCAAAGGAGATTATCGTCGTTCAAA CAAAAGTCCCTGTTGAGTATAAGTGGTCGCCTTTTGATACTTTGAACTGT TTTCATCTTGCACTTAATTTAAAAGCAAAGAAGGTTCACGGTTCCCGTTT AATTGTCCCAAAGCGCACCTCTCATCATCACAGACTCAGCAGAAAGAGCA ACCACAATTCTGTTGGGACCAATTTCCTTCTCAACCTTGTCACTTCACAT ATTACACGAGATGTTGGCGGGAACTAATCATATAAAAGAGAGCAGCTGTT GCTGCAGGCGATGTCATATATAGTTCAAGTACCGTTATTTTTCAATGTAA GAAATGACTCTGCACACCATAGATTAGACGAATAAAAATGCCAACTTGAT GGCTACAAATTGAAGATTTAATATGCAAAACAGCATCAACGCGACGAGAC GCTATAGGTGGTACTCATCATCGTGTGGATCCTGTAGAGCTCGTTGAAAC ATCCATACCCTCAATATTACAAAATCCCTGCAGCATAAGCGATTAAGAGC AACGTTGATTGCAGACTGATGCAATTAAGAAGCAATTAAAAGCAACAAAG CAATTTGACACGAATTTTTGTGGAGTTTGAATGATTAATGTTTTGTTTCT TTGTGAATGTTTCAGGCTCGTGTACTGAGGAGGGTTTTGGTGACTCTGGT TGCAACAGTTTTCGAAACTTACTGTCCAACTGTGGCCACGTCCAAACAGC AGGGTTTCCCCATACACCCTACAGGAATGACATCGTGTGTGAGTGGCATT TACATGTCCAGCCCAGGCACCGCATCGTCATGATGTTCGAACACTTCGAG CTGGAGGAATCGGGTACATGTATTCAATATTCTACTCCTTCAAACACAAA ACGTTTTATTTCCAACTTCTACTGATGCATTGCCATAAATTTCCTAACAC GTTTAGAAGTTATGACAGGTTGCAAGAATCGCTAGCTAGTTAGTTAAGCC ACGTTCACACTCGTCGTAGGTCGCCGTCCACGTTTGATGCAGTAGACTTT CATGCAGACCTTGACAGAACCATTCACCGACAAGCAACTTAGAAAGCCTT TCCTGGAACAAGACAGCTGAATTTGACAGTACACATGCATAGCTCTCCCA AGAATGCATTCAGTTTGCGATCGTACGACGACCTTACGATATGTGACCGG GCTCTTACTAGAATTGAGTTGTTTTATAAGCATTGTTCAAACCATCACTT GAGAGTAGTTTTACCAGTGCTCGGTGGAGTTGGCCCATGACAAGATGGAC ATACCTGAATCTTGGCCTGTAGTTTTAGCAGTGCTCGGTGGAGTTGGCCC ATGACAAGATGGACATACCTGGATCTTGGCCTGTTCCCAAAGCTGGGCAA TAAGCCGATGTTTTCTTCTCCGCATCGTCCCCCGCAAATCCTCGCGGAGT ATTGAAAATCACTTTGTTGTCCTCCAAATGTAGCGAGGGAAATTGAGTTT TGTGAAGTCTACCAATCATAACCCTGTGGTGGAAGCACACAGCACGCACG TGTATAACTCACTGGAGCAAAGCTATTTTCTTCTTTATTGTACCTGGGAT TACGTCTGGATGCGCTTGAAGGGAGGAAGCCAATTTCTGCGTTACGTAAT GAAAAGGATATATATCCCGCCGGATGAATAAATCATCTGCATGTACTCAT CTGTGACTCACCCATGTCTATAATTGCCACATGATATTGCCATTAGTAGT AATTGGACATCATGGCGTACCTGCGGTTATATATCTTCGCTTGGGACTAG TAACTTCACAGTTACGTGATTGGAGTTGCAATGACTTACTTCTATTTATT TACATCATTTTACTATTATTGCATGATTCTTGGCAATTCAATATCTTCGC AAGATGCAGATGACTTCTAGAGAAGTGTGTAGTAAATATATAACTCTTCT TAAATCGACGAAGGTTAGACATCCAGATACTGAAGTACACAAGGTAACAG TTTCTCAAGCAACTGGATAGATTTTGAAAACCGTCAGACATTTCAGTTGG CATCAGATCCACTACTTTTAGTCAGTGACATCCACTACCTTTCGTCAGTC ACGGATTTTTTATCCTACATTTGACCCTACCTGAAACCTTTGATTGTTTC CAAAGTCTGTCAAGTTGCTTGAGTAACTATTATAGTACATCTCTTCTTCC TCAACAGGAAGAAGCTGTGAGTATGACAAGCTCACCGTCTTCGATGGCGT GAATGAGAAGGCCGAACTACTTGGAATCTTCTGTGGTACACAAGATTTCT TGAGGATCGTTTCCAGCCGCAACCATCTATTCATGAGGTTCACATCGGAT ACATCTATAACAACGACAGGATTTCACGCCTCATATACTTCAGAAGGTAT GTGCACATGATGCTTTTGATGATGATTTAAAAGACGAAGGCAAGTACAAG GCTGATATGACAAACACAGCAAGGTCCTACAAGATCAAGATTAAGACAGC ACTAACGTTTTGAACGGTTTACTAATTATATATATAACGTTTATTTGCAA GTTCATGCCCGAAGGTTAATTACAAGTTCATGGTAGAAACATAACAAACA TACGTACATGTAACAATGGGCAGTTGATTTACATTATCGTCACAAAAGAC TAAACAAATACTAGAGTTGCCTTGGCTTCGCCTTATTTTGGTGAAGACGA AAAGCCCCGACTTTTCCATGATTTGTGGGCTCTGTGATTGTAAGAGAAAT GTGGCTTTCTGTTCATCTTTAAAACAACTCTGTTCCTTCATCGTGGTTAT GAACCATTTATAAACCATTTGCACTTTAGTACAGAAATTGTTTTGGTCTT TCTAAACATACGTTGTTTTCCTACATTTGCACTTCCCAAACCTTTCCTTT TTTCAAACTTACAAGCTTCTACTGACAAATGTACTTAGTGATGAGAGATG TCGACCAGAAGACGCTACGAGCCATAGTTGACCTTGGTCCGGAGACATAC CCGTGCCCGGGAGCCGCTAACATCACCGCGGGGGGTCTGGCAGCTGCCAC GTACTCTGCTGAATGTGAACTCCGGGAGCAGATTGCGCTGGTGTGGGAGC CCTGGGGTAACATCAGTCAGAGCCTGGTGGAGGTAAACCGATATTTTACC ATCGCTGTGTCGGCATATGTAACTCATGATGTTCACGTACGTCTCGGTTG TACAGTTAAGCCCCCGGCCAATTTTTCAGCCCACAATTGAGGCAGGCGGG GGTTAGCTTTTCCTCAACTTGTAGTGTAGAGGCAGCATTTAGTTTTCATA AGGCCCTCTTTTCGCTGGACGGCGATGGCTGATAGGCCCTACAAGTACAA CTCCTACAATTAATATTGGATATGTTGATTTGATAATTGAAATATGATAC AAGATGTAAGAGCATTATGTAAAAGACAAAAAATGTTTCGAAATTCTTTC TTTATCCATGAAATTCGTTGAGCTAATTTTTGGTTTCTCAGTGGTTTCTC AGCGGTTGCTAAGCAATTGCAGCTTCAAGTGGTATGGGGGTGTTGGGGAT TAACAATGTGCTAGTGGGGTATGCCAGCCATTGTCTTCAAACACCCCTAA CAATGATATCACACACAATAGCCATATAGAATCGCTCTGCTGTTGCACGT CTGCTTGTCTACGTGTGTTTGATTTTCAGATATACGAAAGTGACTTCGAC AGCTCAAATCCAGTTGTGATTGACGACTTTAGCCAGGACATCAACCGTAG GCTAGTTTCCAAAGGCCATCGACTACAGTTGTCACTTCGTCTAAGACAGA GAGATGCTGGTTTGTTTATCCAGTGCCATATAGAAGGTATGAAAATGTTT AAATTGAGATCCTTGTAAGCTTTAGCCAATGATAAATTGTATCGGTATCA TAGTAATTTTTTTGACTTTATAACATTGTCTCAAGAAAATTTCCATCAAA TAATTCATAACTTTTTAATGGCATAATGGCCATCAAACATTTCTATTCTA ATTTTGATTTCAGACATTGCAGACAAAATTCCCCCTTGTTTACCAGCGGT AAGGAAAACCTCTGACATCGACACAATAGCGATGAACACTCAAATATCAG GTATGTAGACATGAAGTCAGTTTAATTCTATACTTTTGTTTATTTACACT AAGAAAGTTAGTATGTTGGGCATTAGTGTGTGAATGAGTGAGTTTACTTA TATTTGGGAGCATCAATATGCTTTAATACCGGTTGAATCTCTGTGCTATT TTGTGCGTAAGGGGGGTACGGTGAGGTTATGTTAACTGTCGCTCATTTCT AAACAATGATCACATTTTGTGCCATTCTAGCACCCAACATTCCCGCAGAC ACGGACCTGATTTGCAAAGTTGCTGTGAAAACTTCGACCAGCCGGAGACT TCTGACCAGTTTAGACCTCGTCAGCAATCCGATTGCCTCAGCCCAAAGAG AGCCGCACGGCAGCCGCACCCGAGCAGCCCTCTACAACCCGGAAAGAAGA AGACTGCTGTCTTTGAGCTCACAGACGCCACTTCCGCTCCCAACAGTCAC TTCGCAAGAAGACCTGTTGATCGTGTTTTGGTCGAATGTTGTGAACAGTC AGTGGATACCAGAAGTCCAGTACAGTCCTACAGGTAAGACCTGGCAGACA ATTAAGCGGGCATCTCACTGGCATGCGTTTGCTTGAGAAAAATTATCCCG GCAACTTGGCGAGTTTTTTTGCCAATTTGAATACGGGACCTCTACAAGCA AACTGGCCAAGCTAGAGAATGTCATATCCTCAGTAGACCCAAATTAGATA CCAGATAACTTTCTTGGAAATCGCAGTGTTGCTAAATTTGCAGTGATCGC ACCATGTTACCAATTGCAATGTTTTTTTGTTTGTTTTTTTTCAAGCGAGA AATTTGAGCCCACTGACCACGTTGGCGAATGTCTTTCGCAAACAGGCGTG GCCCAGTGACCCGCAAGTACTACCCGCTTGATGAATGAAGAAGAATCATG CCACGGGAATTACATTTAGAATTCCTCTACGTGTGAAGTTTACAACCATA TCAGAATTCTACTAAAACTACTGCTCGTAACCGGACAAAGTGGAGAAAAT TGAAGACTGACTGCGGCTGCAGGGTGTCCAGACCACTGCAGTAGCAGAAC ACAGTGGACTTCTGCTCGTGATGTTTTATTACTGTTATGAATACAAATGA TTTCGGAACGCTGCTATTTCTATTTATCTCATCAAATGATCAACGGTATG TCACATACATCCGATCATCTTTGTACTGAGATGTGTTACGTGAAATTGTA CATTTTTCGATTAATGCTGCATTTTTCAACACCTTAGGATGCCAAGATTA CTCAAATGAGTTGATGAAGAATGGAACCACAGTCATAGAAGACACATGTG GCATCTTCAATCATCACCCCGTCCATGGCTCTACAAACTTCGAATATCGG ATACGGATCAACGTCAAGGAAGGAACGTACATAAAGGTTGTAATGCCGCC GCTCTCAAGATATGAAGATATTAGATTCATGTGCAAGCACATGAAATATG CTTGTGTGGAAGACTTAAAGGTAAGAATCCATCAAAAATGTTATTTTTTG GAAGTAATGGTAACACCAGATACCGTACAAGGTGTCAGAGCTTGTAAATT ATAGCCTTTTGTAAAAACTTTCTGATTCGTAAATAACTGCGTTCATTTTG ATATTGAGCCCTCTTGTGTTGGAAACTTTTAAAAGTCAATCTGTACATTT CACAAAGATGGACTGCACTTGTAAATGTCTGATTTCACACTAGGTCTATG ATCTTCATGGGAACTCTCCTGTGTTGATATACTCCCTCTGCCACCAATAC AAAAATGCGTGGAAAACGGTTTTGTCGTCCAGCAGTACACTGGAAATCGT CTACAGCACCTTCTGCGCGTGGTCCAGGAGTGGATTTATCCTTTTCTTTG AAACATCAGGTAACGGGAATGCGCATATTATTAATCGCACTGACGACAAA AATCACAACAACGATGCTGATTCTTAACCGAATAACGAAATAGCTTTATC CATTTCCATCCTGTTTCAGTAAGAGCATCGACTGGCAATACGTATACGTC ACTAACATTGTGTCACGTCGAGAGGCAATAGCGAATAAGACACAGTATTT CTCTACTGTTCTTTCAGAATGCCCAAGGATGAAAGCTGAAAGCTGTGAGA AACAGATCGATCTCCCTGCACCTTGTGGCTCATTTCTCCCGCCTTCACAA GGGCAGAAACTCG

Coding sequence (CDS) from alignment at Sc0000006:3468799..3483411+

>transcript:BL96516_cuf0 ID=transcript:BL96516_cuf0|Name=transcript:BL96516_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1698bp|location=Sequence derived from alignment at Sc0000006:3468799..3483411+ (Branchiostoma lanceolatum)
ATGTTTCCTTCATCTGAGACCATATTCCATGCTCTGCTACTAATTGCCAT
AATGTCAGCTGATGCTCAAGAATCTGGCTCGTGTACTGAGGAGGGTTTTG
GTGACTCTGGTTGCAACAGTTTTCGAAACTTACTGTCCAACTGTGGCCAC
GTCCAAACAGCAGGGTTTCCCCATACACCCTACAGGAATGACATCGTGTG
TGAGTGGCATTTACATGTCCAGCCCAGGCACCGCATCGTCATGATGTTCG
AACACTTCGAGCTGGAGGAATCGGGAAGAAGCTGTGAGTATGACAAGCTC
ACCGTCTTCGATGGCGTGAATGAGAAGGCCGAACTACTTGGAATCTTCTG
TGGTACACAAGATTTCTTGAGGATCGTTTCCAGCCGCAACCATCTATTCA
TGAGGTTCACATCGGATACATCTATAACAACGACAGGATTTCACGCCTCA
TATACTTCAGAAGTGATGAGAGATGTCGACCAGAAGACGCTACGAGCCAT
AGTTGACCTTGGTCCGGAGACATACCCGTGCCCGGGAGCCGCTAACATCA
CCGCGGGGGGTCTGGCAGCTGCCACGTACTCTGCTGAATGTGAACTCCGG
GAGCAGATTGCGCTGGTGTGGGAGCCCTGGGGTAACATCAGTCAGAGCCT
GGTGGAGATATACGAAAGTGACTTCGACAGCTCAAATCCAGTTGTGATTG
ACGACTTTAGCCAGGACATCAACCGTAGGCTAGTTTCCAAAGGCCATCGA
CTACAGTTGTCACTTCGTCTAAGACAGAGAGATGCTGGTTTGTTTATCCA
GTGCCATATAGAAGACATTGCAGACAAAATTCCCCCTTGTTTACCAGCGG
TAAGGAAAACCTCTGACATCGACACAATAGCGATGAACACTCAAATATCA
GCACCCAACATTCCCGCAGACACGGACCTGATTTGCAAAGTTGCTGTGAA
AACTTCGACCAGCCGGAGACTTCTGACCAGTTTAGACCTCGTCAGCAATC
CGATTGCCTCAGCCCAAAGAGAGCCGCACGGCAGCCGCACCCGAGCAGCC
CTCTACAACCCGGAAAGAAGAAGACTGCTGTCTTTGAGCTCACAGACGCC
ACTTCCGCTCCCAACAGTCACTTCGCAAGAAGACCTGTTGATCGTGTTTT
GGTCGAATGTTGTGAACAGTCAGTGGATACCAGAAGTCCAGTACAGTCCT
ACAGGATGCCAAGATTACTCAAATGAGTTGATGAAGAATGGAACCACAGT
CATAGAAGACACATGTGGCATCTTCAATCATCACCCCGTCCATGGCTCTA
CAAACTTCGAATATCGGATACGGATCAACGTCAAGGAAGGAACGTACATA
AAGGTTGTAATGCCGCCGCTCTCAAGATATGAAGATATTAGATTCATGTG
CAAGCACATGAAATATGCTTGTGTGGAAGACTTAAAGGTCTATGATCTTC
ATGGGAACTCTCCTGTGTTGATATACTCCCTCTGCCACCAATACAAAAAT
GCGTGGAAAACGGTTTTGTCGTCCAGCAGTACACTGGAAATCGTCTACAG
CACCTTCTGCGCGTGGTCCAGGAGTGGATTTATCCTTTTCTTTGAAACAT
CAGAATGCCCAAGGATGAAAGCTGAAAGCTGTGAGAAACAGATCGATCTC
CCTGCACCTTGTGGCTCATTTCTCCCGCCTTCACAAGGGCAGAAACTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96516gene:BL96516Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96516_cuf0transcript:BL96516_cuf0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96516_cuf0-E1BL96516_cuf0-E1-1564476830-69136Branchiostoma lanceolatumexon
BL96516_cuf0-E2BL96516_cuf0-E2-1564476830-69138Branchiostoma lanceolatumexon
BL96516_cuf0-E3BL96516_cuf0-E3-1564476830-69140Branchiostoma lanceolatumexon
BL96516_cuf0-E4BL96516_cuf0-E4-1564476830-69142Branchiostoma lanceolatumexon
BL96516_cuf0-E5BL96516_cuf0-E5-1564476830-69144Branchiostoma lanceolatumexon
BL96516_cuf0-E6BL96516_cuf0-E6-1564476830-69146Branchiostoma lanceolatumexon
BL96516_cuf0-E7BL96516_cuf0-E7-1564476830-69148Branchiostoma lanceolatumexon
BL96516_cuf0-E8BL96516_cuf0-E8-1564476830-69150Branchiostoma lanceolatumexon
BL96516_cuf0-E9BL96516_cuf0-E9-1564476830-69152Branchiostoma lanceolatumexon
BL96516_cuf0-E10BL96516_cuf0-E10-1564476830-69155Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000006genomeSc0000006:3468799..3483411 +
Properties
Property NameValue
Transcript idBL96516_cuf0
Biotypeprotein_coding