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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96599_cuf22 >transcript:BL96599_cuf22-protein ID=transcript:BL96599_cuf22-protein|Name=transcript:BL96599_cuf22|organism=Branchiostoma lanceolatum|type=polypeptide|length=217bp
EQGLCSWSNAGPITDQFDWLRNQGGTPSSVTGPAVDHTTNTDQGFYMFTE
VSDTSLAQGDRAILWSEHFPAATDSCFSLWYHMYGTNVGALYVQKYTQGA
FQPVWDIQGQVGNVWQFANISLSSNTEFQITVIGEKGNGYTGDIAVDDLN
YQEVSCGAVTTPAPTTTPGPSQAPSSFDCNFETDLCTWTQSATDDFNWSW
QQGSTATSNTGPEFDHT Run BLAST on NCBI mRNA from alignment at Sc0000000:3110144..3112291- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96599_cuf22 ID=transcript:BL96599_cuf22|Name=transcript:BL96599_cuf22|organism=Branchiostoma lanceolatum|type=mRNA|length=2148bp|location=Sequence derived from alignment at Sc0000000:3110144..3112291- (Branchiostoma lanceolatum)
TGAGCAGGGACTCTGCAGTTGGTCAAATGCTGGACCAATCACAGACCAGT
TTGACTGGCTGCGTAACCAGGGTGGCACACCGAGCTCTGTTACAGGCCCG
GCTGTGGACCACACCACTAACACAGATCAGGGTAAGTGCTGGTGCTGTGC
CCTGTCTCTTCTTCCATAAGCAATGAGGAAAGGGCTTAATCTTTCCATAA
AGCAGGGGTGTCTCCAGGACCTGTCCTTCCGTCCCAGGACGCAAATTTGC
TTCTTGGGATGGAAAAAAATTCAACCCTTTCCTTTCATGAGATAAAACTG
ATGAAAATGTATTTGAATGAATAAGGTCAAGGGATAACATTTTTCTTCGG
GTTTTTACATGTTTACTGTTTTTCAAAGTGGTAAAATTATGTAACCCAGC
AGATTAATGTTAATGCAGGTTACTTCTCATTTTATGTCAACAAGGTTTTT
AAAATGTTATAATGACTTTTGTTTGCAGGTTTCTATATGTTTACGGAGGT
GAGCGACACGTCGCTGGCTCAGGGAGACCGGGCCATCCTGTGGAGCGAGC
ACTTCCCAGCTGCAACTGACTCCTGCTTCTCCCTCTGGTACCATATGTAT
GGAACAAGTAAGGACAATGCACTTATCATCATCATCATGTTTCATACTCT
TTACAAATTGGAGCGTATACATAGCTTAGCCTCCAGGATTAACTATTGTA
CATCATTTTAGTCAAGTCTTGTGTGTGGGTGGTGTTCAACACCAAGGACA
GGACCAGGTGTGTTTGCTTGTGTATGTGTTTGGTATTCAGCACCAGGGAC
AGGTGTGTTTGGTTATGTGTGTATGGTGTCCACCACCAGAGACAGGTATA
TTTGTGACTGTGTGAATGGTGGTCATCACCAAGGACAGGAGCGTTTTCCT
GTGTGTGGATGGTGTTCAGCACCAAGGACAGGTGTGTGTGTGTGGATGGT
GTTCAGCCTCAGGGACAGATGTGTTTTTGTGTTCAGTACCAGTTCATGTG
GCTTGTGGTTGTGATAAACATGTCTGTCTTCAATTCCAACTTAACTTAAT
CTTAATTGTATAAACACTTATATATAGTTTGTTGGTAATACCTAATCTAT
CTATTACATTTTATAGACGTTGGAGCACTCTATGTGCAGAAGTACACCCA
GGGTGCCTTCCAGCCAGTATGGGACATCCAGGGACAGGTGGGTATTTTTT
TCCTATTGGAATCTCTAAAATTGTCTTCACTTTATTTGCATGTGAGCTCA
TAGTTCATGCTTAAAACCCTGCTGATCGTCAAATCTTGCTCACTGACGAA
AGATATTGGATGCTACTTAAAATATCTGACCATTTCCAAAGTCATTACCA
GTTGCTTGTTCACTAAATACAATGTGAATACATTCAACATAATCTAAATT
TACATTTGTACACAGCATGAGTTTCACTGCTTCTGCAGGCAGGTTGTAAC
AATGTTCTGTTACACTTAATAAAGTTAAACATGATTTTCTCAATGAAAAT
CTATAGTAAAATGGGGCAACTTTTGCAAAATTTGTCATACAGGTGGGTAA
CGTCTGGCAGTTCGCCAACATCAGCCTCAGCAGCAACACAGAGTTCCAGA
TCACCGTCATTGGGGAGAAGGGCAACGGCTACACGGGAGACATCGCGGTG
GACGACCTGAACTATCAGGAGGTGTCATGTGGTGCGGTCACGACCCCTGC
TCCTACCACCACCCCAGGACCATCACAAGGTGAGATCCCAAACTTTTTGT
TTATGTTTTTATTTTAGATCAACAGATACACTTACGATACAAAACGTGGG
TCTCTTCATTTTCCACTGCCTTCAAAAAAGAAGTCAAACTCAACCATAGT
CAACCATAGTTAACATAGAACTTTGAATTCACAGTAGACTAGACAACTTT
TTCGATTTCCATGTATCTCCATGTACTCGTTTGTCTGCAATTAGCCATCG
GGCATGAACTTGCAATAAAGTTATTATTATTATGTATTATTGTACTTTTT
CTTAAACTGCAGCGCCAAGCAGTTTTGACTGTAACTTTGAGACAGACCTG
TGTACCTGGACCCAGTCTGCCACAGATGACTTCAACTGGAGCTGGCAACA
GGGTAGCACAGCAACGAGCAATACCGGACCTGAGTTTGATCACACTCT Coding sequence (CDS) from alignment at Sc0000000:3110144..3112291- >transcript:BL96599_cuf22 ID=transcript:BL96599_cuf22|Name=transcript:BL96599_cuf22|organism=Branchiostoma lanceolatum|type=CDS|length=651bp|location=Sequence derived from alignment at Sc0000000:3110144..3112291- (Branchiostoma lanceolatum)
GAGCAGGGACTCTGCAGTTGGTCAAATGCTGGACCAATCACAGACCAGTT
TGACTGGCTGCGTAACCAGGGTGGCACACCGAGCTCTGTTACAGGCCCGG
CTGTGGACCACACCACTAACACAGATCAGGGTTTCTATATGTTTACGGAG
GTGAGCGACACGTCGCTGGCTCAGGGAGACCGGGCCATCCTGTGGAGCGA
GCACTTCCCAGCTGCAACTGACTCCTGCTTCTCCCTCTGGTACCATATGT
ATGGAACAAACGTTGGAGCACTCTATGTGCAGAAGTACACCCAGGGTGCC
TTCCAGCCAGTATGGGACATCCAGGGACAGGTGGGTAACGTCTGGCAGTT
CGCCAACATCAGCCTCAGCAGCAACACAGAGTTCCAGATCACCGTCATTG
GGGAGAAGGGCAACGGCTACACGGGAGACATCGCGGTGGACGACCTGAAC
TATCAGGAGGTGTCATGTGGTGCGGTCACGACCCCTGCTCCTACCACCAC
CCCAGGACCATCACAAGCGCCAAGCAGTTTTGACTGTAACTTTGAGACAG
ACCTGTGTACCTGGACCCAGTCTGCCACAGATGACTTCAACTGGAGCTGG
CAACAGGGTAGCACAGCAACGAGCAATACCGGACCTGAGTTTGATCACAC
T
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:3110144..3112291 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96599_cuf22 |
| Biotype | protein_coding |
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