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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96623_cuf2 >transcript:BL96623_cuf2-protein ID=transcript:BL96623_cuf2-protein|Name=transcript:BL96623_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=620bp
LCDDTLRLICGKIGDWKLVCTTLGCDYAFIHKFQDQYHDDDYLSCFHALK
TWRDTFDASYDDKVNILCKTLRNCGYTDCAGIVDDKHRTECSVVLCDSQI
DIYSKKLSSDWKNFCTYLGCDDDFITKIEQQCGHDNYLCTSTALKHWRDT
VDCSYVEKIDLFCHACDSCGYHDIAVDCRDNFRHEVYVTSSVSTSYGTSS
VVSTQSVGGSASTVTGLALCDDTFHIICTKISTDWRAVCIALGCGSDMIT
KVVSECGSDDVLCCGTMLKYWRDSWHVDYSDKVDTLCTALRTCGYTDCAT
TVYAKYRTEHSVALCDGQIDIYCKTLSHDWKTFCHALDCSDDFITKIEVE
CGHDDYLCCSTAIKTWRDTVDCSYADKIDNFCNACYHCGFDDIAVDCRDH
YRNEVFVTGGSSGFSTSGTSGHYVSGGVLVTGLALCDDTLRVICHKIDDW
KLVCTHLGCDDAFIHKFQDQYKDDTYMCCFHALKTWRDTFDTSYDDKYNT
LWKTLRDCHYYDCADTVYHKYRTEHSFALCDSQIDVYSHKLSDDWKYICV
DLQCDDDFINKIEMECGGDNYLCISTALKHWRDTVDCSYDDKIDLFCHAC
DNRGYHDIATECRSNFRYES Run BLAST on NCBI mRNA from alignment at Sc0001373:2790..5154+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96623_cuf2 ID=transcript:BL96623_cuf2|Name=transcript:BL96623_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2365bp|location=Sequence derived from alignment at Sc0001373:2790..5154+ (Branchiostoma lanceolatum)
CTGTGTGACGACACACTGCGCCTTATCTGCGGCAAGATCGGAGACTGGAA
GCTGGTCTGCACAACACTTGGCTGTGACTACGCCTTCATCCACAAGTTCC
AGGATCAGTACCATGACGACGACTACCTCAGCTGCTTCCATGCCCTGAAG
ACCTGGCGCGACACCTTCGACGCAAGCTATGACGACAAGGTCAACATCTT
GTGCAAGACCCTGCGTAACTGTGGATACACGGATTGCGCTGGAATCGTCG
ATGACAAGCACCGCACCGAGTGCAGCGTCGTACTGTGCGACAGTCAGATC
GACATTTACAGCAAGAAGTTGAGCAGTGACTGGAAGAACTTCTGCACATA
TTTGGGCTGCGATGACGACTTCATCACCAAAATCGAGCAGCAATGTGGTC
ATGACAACTATCTGTGTACCAGCACTGCCCTCAAGCACTGGCGTGACACG
GTCGACTGCAGCTACGTGGAGAAGATCGACCTCTTCTGCCATGCCTGCGA
CAGCTGTGGCTACCACGATATCGCAGTGGACTGCAGAGACAACTTCCGCC
ATGAAGTCTATGGTTAGTATCTATCTATTAATAGGTCCATTTTTGAAGTT
TGAGAAAACGTACAGTCGTCGCATCTTCACAAATTTATTTAATGTCCGCT
TTGACACTTATCTTCCGCATATTTTCTTGTAGTGACGTCGAGTGTCTCAA
CAAGCTACGGAACGTCCTCTGTGGTGTCGACCCAGTCCGTCGGTGGCAGC
GCTTCAACTGTCACAGGTTTGTCTCTTTCTTTGCAACCTACTGCCAGTTT
TAATCCATTATTCCGCGCATTGCTATACGTTAGCAGGATAGAAGAAAACC
TCTATGGAATTGGTGATTGACACCGGCTTATGGTCTTGTTCTTAGGACTG
GCACTGTGTGACGACACCTTCCACATCATCTGTACCAAGATCTCCACCGA
CTGGAGAGCTGTGTGTATCGCACTGGGTTGCGGCTCGGACATGATCACAA
AGGTCGTCTCTGAGTGTGGCTCGGATGACGTTTTGTGCTGCGGCACTATG
CTCAAGTATTGGCGTGACTCTTGGCATGTGGACTACTCCGACAAGGTCGA
CACCCTCTGCACTGCCCTGCGTACATGTGGCTACACCGACTGTGCCACCA
CTGTCTACGCAAAGTACCGCACTGAGCACAGCGTGGCTCTGTGTGATGGC
CAGATTGACATCTACTGCAAGACCCTGAGTCACGACTGGAAGACATTCTG
CCATGCCCTCGACTGCAGTGACGACTTCATCACTAAGATAGAGGTCGAGT
GTGGCCACGACGACTACTTGTGTTGCAGTACGGCTATCAAGACCTGGCGT
GACACTGTGGACTGCAGCTACGCTGACAAGATCGACAACTTCTGCAACGC
CTGTTACCACTGTGGTTTCGACGACATCGCCGTGGACTGTAGAGATCATT
ACCGTAATGAGGTCTTCGGTGAGCATCTTTTGTTGCACCCTTCGGGGTAT
ATTTGGTGCTATGATTCTGAAGTCCTTTCCAATTCCATTCATCTCACTCA
ACGCTTATAGGTTTGTTTCCTTTTTTGCCATTCTTAGTTACTGGTGGCTC
CAGCGGCTTCAGCACAAGTGGAACGTCGGGCCATTACGTCAGCGGAGGCG
TGCTGGTCACAGGTCAGTCTACTTGATTTTTGCTCGCTGCATGTAATGGT
CTGGATATCTTTGCCTGCTCCCGATGAAATGGCTTATATTTCAAAGATCT
CAATTATGACTACGCTACTGAAACATAATCGTACGTATCTCTTTGTAGGA
TTGGCTCTGTGTGATGACACACTTCGCGTCATCTGTCACAAGATTGATGA
CTGGAAGCTGGTCTGCACTCACCTGGGTTGTGATGACGCATTCATCCACA
AGTTCCAAGACCAATACAAGGACGACACCTACATGTGCTGCTTCCATGCC
CTCAAGACATGGCGCGACACATTCGATACCAGCTATGATGACAAATACAA
CACCCTGTGGAAGACACTGCGCGATTGTCACTATTACGATTGCGCCGACA
CCGTGTATCACAAGTATCGCACCGAGCACAGCTTTGCCCTGTGTGATAGC
CAGATCGATGTGTACAGCCATAAGTTGAGCGATGACTGGAAGTACATCTG
TGTTGACCTCCAATGCGACGACGACTTTATCAACAAGATTGAGATGGAGT
GTGGCGGAGACAACTACCTGTGCATCAGTACGGCTCTCAAGCACTGGCGT
GACACTGTCGACTGTAGCTACGACGACAAGATTGACCTCTTCTGTCATGC
TTGCGATAACCGCGGTTACCACGACATTGCTACCGAGTGCAGGTCCAACT
TCCGCTACGAGTCGT Coding sequence (CDS) from alignment at Sc0001373:2790..5154+ >transcript:BL96623_cuf2 ID=transcript:BL96623_cuf2|Name=transcript:BL96623_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1860bp|location=Sequence derived from alignment at Sc0001373:2790..5154+ (Branchiostoma lanceolatum)
CTGTGTGACGACACACTGCGCCTTATCTGCGGCAAGATCGGAGACTGGAA
GCTGGTCTGCACAACACTTGGCTGTGACTACGCCTTCATCCACAAGTTCC
AGGATCAGTACCATGACGACGACTACCTCAGCTGCTTCCATGCCCTGAAG
ACCTGGCGCGACACCTTCGACGCAAGCTATGACGACAAGGTCAACATCTT
GTGCAAGACCCTGCGTAACTGTGGATACACGGATTGCGCTGGAATCGTCG
ATGACAAGCACCGCACCGAGTGCAGCGTCGTACTGTGCGACAGTCAGATC
GACATTTACAGCAAGAAGTTGAGCAGTGACTGGAAGAACTTCTGCACATA
TTTGGGCTGCGATGACGACTTCATCACCAAAATCGAGCAGCAATGTGGTC
ATGACAACTATCTGTGTACCAGCACTGCCCTCAAGCACTGGCGTGACACG
GTCGACTGCAGCTACGTGGAGAAGATCGACCTCTTCTGCCATGCCTGCGA
CAGCTGTGGCTACCACGATATCGCAGTGGACTGCAGAGACAACTTCCGCC
ATGAAGTCTATGTGACGTCGAGTGTCTCAACAAGCTACGGAACGTCCTCT
GTGGTGTCGACCCAGTCCGTCGGTGGCAGCGCTTCAACTGTCACAGGACT
GGCACTGTGTGACGACACCTTCCACATCATCTGTACCAAGATCTCCACCG
ACTGGAGAGCTGTGTGTATCGCACTGGGTTGCGGCTCGGACATGATCACA
AAGGTCGTCTCTGAGTGTGGCTCGGATGACGTTTTGTGCTGCGGCACTAT
GCTCAAGTATTGGCGTGACTCTTGGCATGTGGACTACTCCGACAAGGTCG
ACACCCTCTGCACTGCCCTGCGTACATGTGGCTACACCGACTGTGCCACC
ACTGTCTACGCAAAGTACCGCACTGAGCACAGCGTGGCTCTGTGTGATGG
CCAGATTGACATCTACTGCAAGACCCTGAGTCACGACTGGAAGACATTCT
GCCATGCCCTCGACTGCAGTGACGACTTCATCACTAAGATAGAGGTCGAG
TGTGGCCACGACGACTACTTGTGTTGCAGTACGGCTATCAAGACCTGGCG
TGACACTGTGGACTGCAGCTACGCTGACAAGATCGACAACTTCTGCAACG
CCTGTTACCACTGTGGTTTCGACGACATCGCCGTGGACTGTAGAGATCAT
TACCGTAATGAGGTCTTCGTTACTGGTGGCTCCAGCGGCTTCAGCACAAG
TGGAACGTCGGGCCATTACGTCAGCGGAGGCGTGCTGGTCACAGGATTGG
CTCTGTGTGATGACACACTTCGCGTCATCTGTCACAAGATTGATGACTGG
AAGCTGGTCTGCACTCACCTGGGTTGTGATGACGCATTCATCCACAAGTT
CCAAGACCAATACAAGGACGACACCTACATGTGCTGCTTCCATGCCCTCA
AGACATGGCGCGACACATTCGATACCAGCTATGATGACAAATACAACACC
CTGTGGAAGACACTGCGCGATTGTCACTATTACGATTGCGCCGACACCGT
GTATCACAAGTATCGCACCGAGCACAGCTTTGCCCTGTGTGATAGCCAGA
TCGATGTGTACAGCCATAAGTTGAGCGATGACTGGAAGTACATCTGTGTT
GACCTCCAATGCGACGACGACTTTATCAACAAGATTGAGATGGAGTGTGG
CGGAGACAACTACCTGTGCATCAGTACGGCTCTCAAGCACTGGCGTGACA
CTGTCGACTGTAGCTACGACGACAAGATTGACCTCTTCTGTCATGCTTGC
GATAACCGCGGTTACCACGACATTGCTACCGAGTGCAGGTCCAACTTCCG
CTACGAGTCG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001373 | genome | Sc0001373:2790..5154 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96623_cuf2 |
| Biotype | protein_coding |
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