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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96624_cuf5 >transcript:BL96624_cuf5-protein ID=transcript:BL96624_cuf5-protein|Name=transcript:BL96624_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=397bp
GLALCDDTLRLICGKIGDWKLVCTTLGCDYAFIHKFQDQYHDDDYLSCFH
ALKTWRDTFDASYDDKVNILCKTLRNCGYTDCAGIVDDKHRTECSVVLCD
SQIDIYSKKLSSDWKNFCTYLGCDDDFITKIEQQCGHDNYLCTSTALKHW
RDTVDCSYVEKIDLFCHACDSCGYHDIAVDCRDNFRHEVYVTSSVSTSYG
TSSVVSTQSVGGSASTVTGLALCDDTFHIICTKISTDWRAVCIALGCGSD
MITKVVSECGSDDVLCCGTMLKYWRDSWHVDYSDKVDTLCTALRTCGYTD
CATTVYAKYRTEHSVALCDGQIDIYCKTLSHDWKTFCHALDCSNDFITKI
EVECGHDDYLCCGTAIKTWRDTVDCSYADKIDHFCNACYHCGFDDIA Run BLAST on NCBI mRNA from alignment at Sc0001373:5966..7407+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96624_cuf5 ID=transcript:BL96624_cuf5|Name=transcript:BL96624_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=1442bp|location=Sequence derived from alignment at Sc0001373:5966..7407+ (Branchiostoma lanceolatum)
GGATTGGCTCTGTGTGACGACACACTGCGCCTTATCTGCGGCAAGATCGG
AGACTGGAAGCTGGTCTGCACAACACTTGGCTGTGACTACGCCTTCATCC
ACAAGTTCCAGGATCAGTACCATGACGACGACTACCTCAGCTGCTTCCAT
GCCCTGAAGACCTGGCGCGACACCTTCGACGCAAGCTATGACGACAAGGT
CAACATCTTGTGCAAGACCCTGCGTAACTGTGGATACACGGATTGCGCTG
GAATCGTCGATGACAAGCACCGCACCGAGTGCAGCGTCGTACTGTGCGAC
AGTCAGATCGACATTTACAGCAAGAAGTTGAGCAGTGACTGGAAGAACTT
CTGCACATATTTGGGCTGCGATGACGACTTCATCACCAAAATCGAGCAGC
AATGTGGTCATGACAACTATCTGTGTACCAGCACTGCCCTCAAGCACTGG
CGTGACACGGTCGACTGCAGCTACGTGGAGAAGATCGACCTCTTCTGCCA
TGCCTGCGACAGCTGTGGCTACCACGATATCGCAGTGGACTGCAGAGACA
ACTTCCGCCATGAAGTCTATGGTTAGTATCTATCTACTAATAGTAACCCT
GTTTAACTATGAGAAAGCGTAGGTCATCGCTTCTTCAAAAATGTATATTT
TATGTCCGCCTTGACACTTATCTTCCGCATACTTTCTTGTAGTGACGTCG
AGTGTTTCAACAAGCTACGGAACGTCCTCTGTGGTGTCGACCCAGTCCGT
CGGTGGCAGCGCTTCAACTGTCACAGGTTTGTCTCTTTCTTTGCAACCTA
CTGCCAGTTTTAATCCATTATTCCGCGCATTGCTATACGTTAGCAGGATA
GAAGAAAACCTCTATGGAATTGGTGATTGACACCGGTTTATGGTCTTGTT
CTTAGGACTGGCACTGTGTGACGACACCTTCCACATCATCTGTACCAAGA
TCTCTACCGACTGGAGAGCTGTGTGTATCGCACTGGGTTGCGGCTCGGAC
ATGATCACAAAGGTCGTCTCTGAGTGTGGCTCGGATGACGTTTTGTGCTG
CGGCACTATGCTCAAGTATTGGCGTGACTCTTGGCATGTGGACTACTCCG
ACAAGGTCGACACCCTCTGCACTGCCCTGCGTACATGCGGCTACACCGAC
TGTGCCACCACTGTCTACGCAAAGTACCGCACTGAACACAGCGTGGCTCT
TTGTGATGGCCAGATTGACATCTACTGCAAGACCCTGAGTCACGATTGGA
AGACATTCTGTCATGCCCTTGACTGCAGCAACGACTTCATCACTAAGATA
GAGGTCGAGTGTGGCCACGACGACTACTTGTGTTGTGGTACGGCTATCAA
GACCTGGCGTGACACTGTGGATTGCAGCTACGCTGACAAGATCGACCACT
TCTGCAACGCCTGTTACCACTGTGGTTTCGACGACATCGCCG Coding sequence (CDS) from alignment at Sc0001373:5966..7407+ >transcript:BL96624_cuf5 ID=transcript:BL96624_cuf5|Name=transcript:BL96624_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=1191bp|location=Sequence derived from alignment at Sc0001373:5966..7407+ (Branchiostoma lanceolatum)
GGATTGGCTCTGTGTGACGACACACTGCGCCTTATCTGCGGCAAGATCGG
AGACTGGAAGCTGGTCTGCACAACACTTGGCTGTGACTACGCCTTCATCC
ACAAGTTCCAGGATCAGTACCATGACGACGACTACCTCAGCTGCTTCCAT
GCCCTGAAGACCTGGCGCGACACCTTCGACGCAAGCTATGACGACAAGGT
CAACATCTTGTGCAAGACCCTGCGTAACTGTGGATACACGGATTGCGCTG
GAATCGTCGATGACAAGCACCGCACCGAGTGCAGCGTCGTACTGTGCGAC
AGTCAGATCGACATTTACAGCAAGAAGTTGAGCAGTGACTGGAAGAACTT
CTGCACATATTTGGGCTGCGATGACGACTTCATCACCAAAATCGAGCAGC
AATGTGGTCATGACAACTATCTGTGTACCAGCACTGCCCTCAAGCACTGG
CGTGACACGGTCGACTGCAGCTACGTGGAGAAGATCGACCTCTTCTGCCA
TGCCTGCGACAGCTGTGGCTACCACGATATCGCAGTGGACTGCAGAGACA
ACTTCCGCCATGAAGTCTATGTGACGTCGAGTGTTTCAACAAGCTACGGA
ACGTCCTCTGTGGTGTCGACCCAGTCCGTCGGTGGCAGCGCTTCAACTGT
CACAGGACTGGCACTGTGTGACGACACCTTCCACATCATCTGTACCAAGA
TCTCTACCGACTGGAGAGCTGTGTGTATCGCACTGGGTTGCGGCTCGGAC
ATGATCACAAAGGTCGTCTCTGAGTGTGGCTCGGATGACGTTTTGTGCTG
CGGCACTATGCTCAAGTATTGGCGTGACTCTTGGCATGTGGACTACTCCG
ACAAGGTCGACACCCTCTGCACTGCCCTGCGTACATGCGGCTACACCGAC
TGTGCCACCACTGTCTACGCAAAGTACCGCACTGAACACAGCGTGGCTCT
TTGTGATGGCCAGATTGACATCTACTGCAAGACCCTGAGTCACGATTGGA
AGACATTCTGTCATGCCCTTGACTGCAGCAACGACTTCATCACTAAGATA
GAGGTCGAGTGTGGCCACGACGACTACTTGTGTTGTGGTACGGCTATCAA
GACCTGGCGTGACACTGTGGATTGCAGCTACGCTGACAAGATCGACCACT
TCTGCAACGCCTGTTACCACTGTGGTTTCGACGACATCGCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0001373 | genome | Sc0001373:5966..7407 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96624_cuf5 |
| Biotype | protein_coding |
|
