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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96654_cuf4 >transcript:BL96654_cuf4-protein ID=transcript:BL96654_cuf4-protein|Name=transcript:BL96654_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=513bp
TYNPDEGAGHVLNCRQCDAGRACPLVGLTNSSHPCVQGYYCPNGTITQES
FPCPPGTYTNNTDLTAPEECELCPEGFYCSWGTGFTTNGPKPCHTGHYCP
LGTPTPDRYPCPPGTFSPNNNNDNAGNCTACTPGYYCLGGEATETALCPP
GYYCPEGTQVAEQFGCPNGTYNPDYGIWEEDQCLNCTQGNFCEYGVVAPE
ACPEKTYMPYGNNTGTGMVEGDPATRKSSCLTCLAGYYCEVGTITPAECG
LGKYSKPGQSECKDCEPGYYCDEANTTRTSMLNDKKCPPGQFCNGSLSDL
SEATDCTRGYYCPEATPFEVPCPVGTFNPDFGEGFVTACLNCTAGYYCLE
GSYEVSGQCEGGYYCPTAFPNPYGSIPATIGSYGERQVPCPAGTYVTTTA
SETVDDCLDCPEAHYCPLGTKNPIVCDRGYYCPANISGPIPCPVGRYGNT
TGLVQLEDCPLCDKGKYCDAPGLLSPRAPCDPGYVCYSGANTSSPTDGET
GEVCPAGGYCPLG Run BLAST on NCBI mRNA from alignment at Sc0000005:7254697..7262495+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96654_cuf4 ID=transcript:BL96654_cuf4|Name=transcript:BL96654_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=7799bp|location=Sequence derived from alignment at Sc0000005:7254697..7262495+ (Branchiostoma lanceolatum)
ACGTACAATCCTGATGAGGGGGCAGGGCACGTGCTCAACTGCCGCCAGTG
CGACGCGGGAAGGGCGTGTCCGCTCGTCGGGCTCACCAACTCCTCTCACC
CTTGCGTGCAAGGTAAGGTCTTAAGTCTTACTTATACCCAACACCTAGCC
CTAACCCAGGAACCCTAACTCTCACCAACTCCTCCCATCTCTGTATGCAA
GGTCAGAGCACACAGGTCTTACACCTTCCTTTGTGTCTTGTGTTACTGTC
TACTATACAGTTAGTACTGTAAATGCAGTAATGTTCGCGGGATTTAGTTT
TGTGGTAGGGAGAAAATGCAGTCCTGCGGTGGTTTTGAGTTACCATTTTG
AAACAATAGTAGCGCTACAGCCAAACAATGGAATGACTTATCAAGGTGGT
TTTTCTTGCCCTTTTCAGGTTACTACTGTCCAAACGGCACCATCACCCAG
GAAAGCTTCCCATGTCCACCTGGTACTTACACCAACAACACCGACCTCAC
AGCACCCGAGGAGTGTGAACTCTGCCCAGAAGGGTATGTACAGTCGTATC
GGTATCTATGTAGCCGGTATAACCGCCATTCAGCGTAACACACCAGCTTG
GCAGGCACGCGGCACAACAGCAGCTGGTTATACACATGTACATGTATTAC
ACCAAACGGCCTGTTACTCCTAGTTTTTGCATACTATGCAATCTCTGCCT
TGTAGGGTAGTACTGTGGTCTTGGCGGTCACAACACAAACTGTAATGTAT
TACGTACAGTGTTGGTAAGTTTAAACAATTTTATGAGTTCTTAAGATACA
AGTTGAGATTGCAGCAAGGGTGGGATGGTGGTAACATTGCAGGGGAGGCG
AGCCGGCCGCACGAGGCGGTGGATTTCGCGTTGTGAGCGTGGCACGAGCG
GAGGTCAGAGGTCGCTTCCTCCAGCGTAATTCCCTACGATTGGTCCAGAC
CAATCCTACTAAACCGCGTAGCGGAAAAGTAGTTAGTTGTAGTGGTAGTG
CTGAATCTGAATTAGAAGGTAGCTAGATATTCAAGTTCATAAAAAAGTGT
CCAAGGCTGGTGAAGAACGCGCCGCAGGACGTCACCGGCCGGGCACTGTC
GCGTGTCGAACAGCGTAGAGACAAACCGGAAAGGGTACGTCGGCGTGAGT
CTCTCACTTAGTACTGTGAAGTGGGCCGTGGGCGGGTACTGGGGGTCTTC
GGCACGCAGCTGGAGCTGATCTTGATGAACTGTCAATCTGGCTGTGCTAA
ACTACTCTAATCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTACTCTAATCTACTGGAA
AGAGTCAAGAGTTTCGGGTGTGCGTAGTATTCCAGGCTGATGACGATCTC
GCTGCAGGACGCTGCTGCGGACTCCGAGTCGGACCGGAAGGTTAAGTCGC
ATCGACGTGGAGTGGGTAGCCTTGAGTACGCTGCTGTAGATGCACACCGC
ATTCTTGTAGACCATGTAGGTACGGGTGGAAAGGGAGAAGGGCGTGCGAT
GAGGAATTACCGCTCGTGGAAGCTCGTGGATAAGTTGTTAGGTTCGCGAG
AAGAAACATGGCTGCTCAAATCACGGGCCGAAGTCTCGCGAGAACCCGCC
TCAAGGGCGGGAAGTGAGTGAGGGAGGGGGGCTGTTGGTCCGATCGTTGT
AGACTCTCTGTAAATACGCTATTGTGGGACGGCAACCCGCAGGTTTCTTG
GCAGGTTCGTGTGCCTCGGCAGCTGGGAAACGTCGCACGGTAGGTTGAGA
GGCTTGATGAAGGCTCAGAATGTATATGTCGGGGAAACTCACACGGTCCA
GGCGGGTGTGCAGTCCCAGGCTGATGAAGAAACCTCGCTGCAGAACGCCG
CCACAGATTACGAACAGTGTAGAGACAGCCGGAATCAGTCTTCGGGTGAA
ACTCTATGACTAGCTTAGAACTGCGAATCCAGGTGGACAACGTTACTGGG
AGTCCCCGCACGCTACTGTGGTTGCACACCGCGGCCCTGCGTTGACATTG
CAGGGGAGGCGAGGCGGCGGATTTCGCGTTGTGAGCGTGGCACGAGCGGA
GGTCAGAGGTCGCTTCCTCCAGCGTAATTCCCTACGATTGGTCCAGACCA
ATCCTACTATGTATATTCTTACTACCACCAGGTATTAGACTAGTACAGTC
AAACCTGGCTGGCCCTCTACCTAATACAGCCGACCATCTCTAGTCATAAT
CGACATTAAAACAGTTCTGTCCAGTTTTATGTCTATGTCTAAAGACCCTC
TTGCCCTCTTTAAGCAGCCATTCCCCATCACCAATCATATTTCCCTTTGG
TGGTTTTTGAGGCCCAATTTTTACTGTAATTGTGGCTTGGGTGTCTTGAA
GCAAATTTGTGTTCTTACTCATTCTTAATCACTGATTTAGGATAGTCATT
GTTGTCTGAAATGTCTCAGAATTATCTAGTAACTGTTGCTTGATTCGTTA
TGAATGACAATGTTTTTACCTGGATGTCTAACCTTCATTGTTATAATGCC
ATGTTTGCTGCAGGTTCTACTGCAGTTGGGGTACCGGCTTCACCACCAAC
GGCCCCAAGCCCTGCCACACCGGCCACTACTGCCCGCTCGGCACCCCCAC
CCCCGACCGCTACCCCTGCCCCCCGGGGACCTTCTCACCCAACAACAACA
ACGACAACGCTGGGAACTGCACCGCCTGTACCCCAGGGTACTACTGTCTG
GGTGAGTAGTGTCAGTTTCATCTGCAGTGATTTTAAATGTCACAAGGAGG
CATACATGATAGCAATCCTTGCTTGAACTCTTGAAAAGTGGCCAAGGCCG
AAGATCTTTGTTTTTATGCGATTTTTCAGGATGAAAGAAACGTTGGAAAC
AAAACGTACATTTTTGCAAAGGAAATCTTGTCCTTTACACGCACATTGAC
TATAGGTGGGCATCAGTGCCTTTATATTCTGCTATTCAAACTCAATAGGA
GTTTCATACTTTAATTTAGCATATGAAATCATGGTCACCTTTGTGTGGAC
AGTTTTTTGGCTGGAAACTTGAACTACTGAAAAGCAGCACTTTTGTAAAT
GGCCTGCCAAATGTGACTCTACCTTTACTCACAGGCAGTTTGTGTGGCCC
TGTACTGACAAATAGTATAATAAAGGTGTTACTTTGTGGTAATTTCTGCA
CCAAATGTGCTGCTACTTTCCCCCCAGGTGGCGAAGCCACAGAGACAGCC
CTGTGTCCGCCCGGGTACTACTGTCCCGAATGGTGTAACAAATGTGCTGC
TACCTTCCCCCAGGCGGCGAGGCCACTGAGACAGCCCTGTGTCCGCCAGG
GTACTACTGTCCGGAGGGCACCCAGGTCGCTGAGCAGTTTGGCTGCCCCA
ACGGGACGTACAACCCCGACTACGGCATCTGGGAAGAGGACCAGTGTCTC
AACTGCACACAGGTACCGTAGGATTTCCTGGATTCTTAAAGTGTATTATA
AGGAAAGTTAGTAATAAAATTGTAAGCAAAAGAATAGAAATATCAATATG
ATTTTAAATGTCTTTGGTTGTAGGTGAGACTTCTAGCATTTTATTTCTTG
GACTCAGCTCTTTTTCCAGTTTCAGACTGTGGCATTAGTTCATAGTAATT
GATTGTTTTTTGGCATGCTGTTCCCTCCATGTGCTTTGAAGTTTGTAGGA
ATTATGATTCTCTGCGCTGAAGGATTTTATTCTATGATGACATGCCCTTT
ACTGCAGCAGCATATTTGACTTCTTGAATTGTTTGCAGGGAAACTTCTGT
GAGTACGGTGTCGTCGCTCCGGAAGCCTGCCCTGAGAAAACCTACATGCC
GTACGGAAATAACACAGGCACAGGGATGGTCGAGGGTGAGTTAGATTACT
ACTGCTGTAATAGTTATAACTATAACTTTGAAGCATGTTTTGTGAGTAAC
ACATCTTGAAAAATTGACAAAAAAGTCATGATCACCACACCTTTTCTCAA
AGTTACTGAAGGGTTAAAGAAGATCTGCCATAATTCTGAATTTTTTTCAG
TTCAGACTTTTTAGTTCATTAGTCTGTACAATCCTACTTCAGGTATGAGC
CTGGCATGTTATGCCATGCATGTAGCATTTATTCTGTTATGCAATTCAAA
TCCAGACACACTAAAACCAATAGGTTTCAATGTTACTTCACCTCAAGGGA
GTAAAATTTAATTGTTTTTGGCTCATCTGTGGGGGTCTGTCTGTGGGTGT
TTCTGCTGTGCAGTTTCTGCATGTTGTACCAGAAGGAGCTTACTGTCTGA
GGGGGTGAAGTCTGCCATCTCTGATCATTAATTTCCCCCCCCCCCATGTT
CCTGTAGGTGACCCGGCCACCCGTAAGTCGAGCTGCCTGACCTGTCTGGC
GGGGTACTACTGCGAGGTGGGGACTATCACTCCAGCCGAATGTGGGCTGG
GGAAGTACTCCAAACCTGGGCAGAGCGAGTGTAAGGACTGTGAACCTGGG
TAAGTCTGTAGGTAACAAAGTACTGTAACACAAATGCACATGTAGGTACT
GTTGGTTAGGTAGAATATGACATAGAGTGTGAGCTGGGCAAGTACTCCAA
ACTTAATAAATGTAAGGAATGAAAGTTCACTTAATTTGACTTGACAAATT
GCGACCGAGAAAAAACTACTAAAAAACTTTTGAGAATGTTCTTCCAGTGT
TTTGTTGCACAGGTTACATAACTACTGTGACAAGGCCAACACCACACATT
GGGGTGGTTTATTAGTGCAGAAATGTGATGATTTTATAATGTTGCGCCTG
ATGCTTTGTTGCACAGGTACTACTGTGACGAGGCCAACACCACGCGCACA
TCCATGCTGAATGACAAGAAGTGCCCCCCGGGACAGTTCTGTAACGGCTC
CCTGTCCGACCTCAGCGAAGCCACTGACTGCACCCGAGGATACTACTGTC
CTGAAGGTCAGGCCAGCCTTGAGATTAGAATCATTCTTTTTCTTCATTTT
CAAAATGAAAGCAACTTGAATTTCAAACAAATAGATTTTCCAGAACAGCT
TTAAGCAAAAACCAAAAGTTCTGAAGCACAGTTGATCTGTAAGACACAAA
AATTGGACCTGTCTTACCAACAATTTCGACAGATGAGCTCCAGTTTTTGT
TAAGGAATGAGCAATCCACCGCTGTGATCATGTCATGTCATGCAGTCATA
GAACACGTGACTCGATGAGCAGTGGATCATGAGTTGCAGGAAGTTGATGG
CGCCCCCCGTCTCAGTATAATCCTCATCAGAATAATTTCCAGAAACACAG
AGGGATTCTCTGGCTAAATGATATAATTTCTTTTCTCTTTTGCAGCGACT
CCGTTTGAGGTGCCTTGTCCTGTCGGTACGTTTAACCCAGACTTTGGGGA
GGGTTTCGTGACGGCCTGTCTGAACTGCACGGCTGGCTACTACTGCCTGG
AGGGTTCATACGAAGTGTCTGGGCAGTGCGAAGGGGGGTACTACTGCCCC
ACAGCGTTTCCAAATCCCTACGGATCCATCCCAGCAACCATCGGCTCATA
CGGAGAGAGACAGGTAAAACTTTCCTTCATTTTTTAAATTTTTTCTATCT
TTAAATTTTGTTAACTAGAGTGACTATTCATGACTGTGAAGTACTGCATC
TTGTTGTGTTTTGAAGGACACTATTTGACATTGATGATTATTTTAAGTAC
TTTTGTCTCTCCTGTAACTGCCCTATGACTGCTTCTCAATTTTCACAACT
CCTATACTGAATTGTGCTTGTCTTTCTTGCCCACATGTGCTTCAATGTAA
TTCGTTTTGATTTAACATGATTGTGTTCCCACAGTTCTAGCTTGAACTTC
CTTGAATTCTGATGGTAAAAATTGATATTGTTGTGCCCAGGTGCCCTGTC
CTGCTGGCACCTATGTGACAACCACGGCTAGCGAGACGGTGGACGACTGT
CTAGACTGCCCTGAGGCTNTTTCCAGAACAGCTTTAAGCAAAAACCAAAA
GTTCTGAAGCACAGTTGATCTGTAAGACACAAAAATTGGACCTGTCTTAC
CAACAATTTCGACAGATGAGCTCCAGTTTTTGTTAAGGAATGAGCAATCC
ACCGCTGTGATCATGTCATGTCATGCAGTCATAGAACACGTGACTCGATG
AGCAGTGGATCATGAGTTGCAGGAAGTTGATGGCGCCCCCCGTCTCAGTA
TAATCCTCATCAGAATAATTTCCAGAAACACAGAGGGATTCTCTGGCTAA
ATGATATAATTTCTTTTCTCTTTTGCAGCGACTCCGTTTGAGGTGCCTTG
TCCTGTCGGTACGTTTAACCCAGACTTTGGGGAGGGTTTCGTGACGGCCT
GTCTGAACTGCACGGCTGGCTACTACTGCCTGGAGGGTTCATACGAAGTG
TCTGGGCAGTGCGAAGGGGGGTACTACTGCCCCACAGCGTTTCCAAATCC
CTACGGATCCATCCCAGCAACCATCGGCTCATACGGAGAGAGACAGGTAA
AACTTTCCTTCATTTTTTAAATTTTTTCTATCTTTAAATTTTGTTAACTA
GAGTGACTATTCATGACTGTGAAGTACTGCATCTTGTTGTGTTTTGAAGG
ACACTATTTGACATTGATGATTATTTTAAGTACTTTTGTCTCTCCTGTAA
CTGCCCTATGACTGCTTCTCAATTTTCACAACTCCTATACTGAATTGTGC
TTGTCTTTCTTGCCCACATGTGCTTCAATGTAATTCGTTTTGATTTAACA
TGATTGTGTTCCCACAGTTCTAGCTTGAACTTCCTTGAATTCTGATGGTA
AAAATTGATATTGTTGTGCCCAGGTGCCCTGTCCTGCTGGCACCTATGTG
ACAACCACGGCTAGCGAGACGGTGGACGACTGTCTAGACTGCCCTGAGGC
TCACTACTGCCCCCTGGGGACCAAGAACCCCATCGTGTGCGACCGTGGCT
ACTACTGCCCCGCCAACATCTCCGGACCCATCCCCTGCCCTGTGGGGAGA
TACGGAAACACCACAGGTAAGACCTTTCCCTCTTTCTCTCTACAGTTTTA
GTGAAACTTCTTTATAATACATGTACCTACAAGCCTAACATTTCAATGGA
ATTTTAATATGATCCTTGCAGCCCTGTTACAGCTTTCGATAAACTTCTGT
ATGATACCATAGAGGCCTGGTACAGTTTTCATTGAAACCTCCGTATAATA
CCCTAGAGACCTGGTAAAGTCTCTCTGAAACCTCGGTATGATATCCTGCT
AGTCTTGTGCAGTTTTTGTGCACTCCTGTAAGGTACCCTGCGGGTTTGGT
ACAGTTTTTATGAAACTCCTGTATGATACCCTAGAGGCCTAGTAAAGTGT
CTTTGAAACCTTCAGAAACCTCAGTATGGTATCCATTCTGAAACTCCAAT
GTGATACCCTTCAGGTCTGGTGCAGTTGGAGGACTGCCCGCTGTGCGACA
AGGGGAAGTACTGCGACGCCCCGGGTCTGCTGAGCCCCCGGGCGCCCTGC
GACCCCGGGTACGTCTGCTACAGCGGAGCAAACACCTCCAGCCCAACCGA
CGGGGAAACGGGCGAGGTCTGCCCCGCAGGAGGGTACTGCCCACTCGGT Coding sequence (CDS) from alignment at Sc0000005:7254697..7262495+ >transcript:BL96654_cuf4 ID=transcript:BL96654_cuf4|Name=transcript:BL96654_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=1539bp|location=Sequence derived from alignment at Sc0000005:7254697..7262495+ (Branchiostoma lanceolatum)
ACGTACAATCCTGATGAGGGGGCAGGGCACGTGCTCAACTGCCGCCAGTG
CGACGCGGGAAGGGCGTGTCCGCTCGTCGGGCTCACCAACTCCTCTCACC
CTTGCGTGCAAGGTTACTACTGTCCAAACGGCACCATCACCCAGGAAAGC
TTCCCATGTCCACCTGGTACTTACACCAACAACACCGACCTCACAGCACC
CGAGGAGTGTGAACTCTGCCCAGAAGGGTTCTACTGCAGTTGGGGTACCG
GCTTCACCACCAACGGCCCCAAGCCCTGCCACACCGGCCACTACTGCCCG
CTCGGCACCCCCACCCCCGACCGCTACCCCTGCCCCCCGGGGACCTTCTC
ACCCAACAACAACAACGACAACGCTGGGAACTGCACCGCCTGTACCCCAG
GGTACTACTGTCTGGGCGGCGAGGCCACTGAGACAGCCCTGTGTCCGCCA
GGGTACTACTGTCCGGAGGGCACCCAGGTCGCTGAGCAGTTTGGCTGCCC
CAACGGGACGTACAACCCCGACTACGGCATCTGGGAAGAGGACCAGTGTC
TCAACTGCACACAGGGAAACTTCTGTGAGTACGGTGTCGTCGCTCCGGAA
GCCTGCCCTGAGAAAACCTACATGCCGTACGGAAATAACACAGGCACAGG
GATGGTCGAGGGTGACCCGGCCACCCGTAAGTCGAGCTGCCTGACCTGTC
TGGCGGGGTACTACTGCGAGGTGGGGACTATCACTCCAGCCGAATGTGGG
CTGGGGAAGTACTCCAAACCTGGGCAGAGCGAGTGTAAGGACTGTGAACC
TGGGTACTACTGTGACGAGGCCAACACCACGCGCACATCCATGCTGAATG
ACAAGAAGTGCCCCCCGGGACAGTTCTGTAACGGCTCCCTGTCCGACCTC
AGCGAAGCCACTGACTGCACCCGAGGATACTACTGTCCTGAAGCGACTCC
GTTTGAGGTGCCTTGTCCTGTCGGTACGTTTAACCCAGACTTTGGGGAGG
GTTTCGTGACGGCCTGTCTGAACTGCACGGCTGGCTACTACTGCCTGGAG
GGTTCATACGAAGTGTCTGGGCAGTGCGAAGGGGGGTACTACTGCCCCAC
AGCGTTTCCAAATCCCTACGGATCCATCCCAGCAACCATCGGCTCATACG
GAGAGAGACAGGTGCCCTGTCCTGCTGGCACCTATGTGACAACCACGGCT
AGCGAGACGGTGGACGACTGTCTAGACTGCCCTGAGGCTCACTACTGCCC
CCTGGGGACCAAGAACCCCATCGTGTGCGACCGTGGCTACTACTGCCCCG
CCAACATCTCCGGACCCATCCCCTGCCCTGTGGGGAGATACGGAAACACC
ACAGGTCTGGTGCAGTTGGAGGACTGCCCGCTGTGCGACAAGGGGAAGTA
CTGCGACGCCCCGGGTCTGCTGAGCCCCCGGGCGCCCTGCGACCCCGGGT
ACGTCTGCTACAGCGGAGCAAACACCTCCAGCCCAACCGACGGGGAAACG
GGCGAGGTCTGCCCCGCAGGAGGGTACTGCCCACTCGGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:7254697..7262495 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96654_cuf4 |
| Biotype | protein_coding |
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