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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96665_cuf1 >transcript:BL96665_cuf1-protein ID=transcript:BL96665_cuf1-protein|Name=transcript:BL96665_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=434bp
AQDHYNISVPENNDNKQVLSAVATDDDTGTNGRLRYSLMASDNFTIGELT
GDISSTFTFDRESVSSFNLTVLAVDGGDPPRSSTAAVSITVTDVNDNPPV
FLGTPYREKVAEDTPTATSVFTVTATDADFGENGTLSYGENPGGICGDLF
LVDSVTGVMTTRQSLLSINQVERETCVAIVTAYDQGQDQKRTSVEVVFNI
TDANRHDPVFESSRLSDHFSESWNVARRELFTVTAMDEDRGVNGEVSYRI
VDDYGIFTVHQQNQSAHAQVWANRSLDREERDFYNLTLEASDGAVINSRT
ATATLEVWVDDVNDNPPKFVRDNFTTEEIKLLPDTSVGTHVTRVNSTDED
VGTNAIPLFRIESVQDMHLSSPHLFTINSQTGDVNTSATFPNITEDYFVN
VTLRVEDAMNHDLRPDDLTLRIVVPFISTNRHSP Run BLAST on NCBI mRNA from alignment at Sc0000005:7053969..7058071- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96665_cuf1 ID=transcript:BL96665_cuf1|Name=transcript:BL96665_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=4103bp|location=Sequence derived from alignment at Sc0000005:7053969..7058071- (Branchiostoma lanceolatum)
TCGCACAGGATCACTACAACATCAGCGTTCCGGAAAACAACGACAATAAA
CAAGTCAGTATTCTTGAACTAAGCACCTTGTGATGATAAATGGAGGTCCC
GTATTTGAGGAGAGCCACACGTCGAGCACGTTAAAGATCCCACCACACTT
ATCGAAAAGAGTACGGGTTCTTCCCTGTGTGAGTGGTTCATAGCCATACA
GTTCAATGGCCACACCTGGGGCTATTGTCGTATTGAGGTCACCTTGGGGC
CAAAATGGCAGCCTCCAGATCCTTGCGATTCAGCCCCGCTTGGTAATAGT
CGGCAAACCCAATAACGCCCCCTCAGTGCTGTTCGACAGCTTCCTGTCTA
GTAATAACTGACAGCCCAGCTGCTAAGCTGAGGACTGGGGCTATGCATAG
AAGAAAAAAATCAACGAGAAAGTTGGTCAATGGACAGGAGAGCACAACGT
CTTTATTTTTTTTATATTTCGTCGTAGGGCTATGAAGACAAGTCCTTATT
ATAGACGTTTCTCGGTTTGGAATTGTAAACGAAGTTAGCTACCCAAGTCT
CAAATTGTTTGTTTATCTTTATTTATCCAGGGGGTTACATATTGTTTTCG
TCGTACAGGTTCTATCTGCCGTTGCTACGGACGACGACACTGGGACGAAC
GGTCGACTTCGGTACTCCTTAATGGCCTCGGACAATTTCACAATCGGAGG
TAAACAACTTGTCAACATCTCTGGCAAACATCAGTGATATATGTGTCACT
AGCACTGCTTCTGCTTCTTGCTAAAACGTTCGCGGTTTGAACCATGTGTG
TTCCAAGCAATGTTATGCACAGAGGTCCAGAAGAGGCTGCGTTCACTAGG
ATCCACTCACGCCCCGAGACCGCTTGTTTGTTTGAACCTATGTTTATTCA
TGATAAGCTCAAATCGGCACGTACGCTGTTTTTCATTGAGGTCATGAGGG
AAGAGGTAAGGGTCAGCTCCTAGCGTGCTAGCAACCAGCAGTGTGTATTC
ATAAAAACTAGTCATGTCACATAGCGGTTTGCCGGTTATGCCGTTGTCTG
GTAACCCATGCCAATTATGTAATATATTTTTATTATTTTAGAGCTGACCG
GAGACATCTCGTCAACTTTCACGTTCGATCGCGAGTCCGTCTCCTCCTTC
AACCTCACCGTTCTGGCCGTGGATGGAGGAGACCCTCCCCGGTCATCAAC
AGCCGCGGTCTCCATCACAGTAACGGACGTGAACGACAACCCGCCGGTGT
TCCTGGGCACGCCGTACCGTGAAAAGGTGGCAGAGGACACGCCGACTGCT
ACTAGTGTATTCACCGTCACTGCAACGGATGCAGACTTTGGAGAAAACGG
AACTTTGTCCTACGGAGAGAACCCAGGTTTGTCCTATCTAGATAAGAGTT
AGAACCTTTAAGTTAGATAACCTAACTTTCCATAGCATCGCTTCGGTCTG
CTTCAAGAAAACTGGCCCAACCACTAGACACGAGCCCATAAGGAAAAATG
ACGTCAGTAGAAGTTGTCCGTATAAGTAAAGGAACAACTGTATCCGCACT
AGGCACCCTACAACACACCGACTTACGCGTCTCTTGCTATACATGTAGGC
GCTGCTGTTGAACTTTGAACCGAATATTAGCCTTTAGAAATTCGTTCCTT
GCTCATCAAGGCAAAAATGCCCATACTCGACAAAATAGAATAACATGAAA
TGTCAGATGTTTGTCACAGTAAGATTGCACAAAGTAAGCTTTTCACTTCT
GATCCCCAGGTGGCATCTGCGGAGACCTGTTTCTGGTGGACAGCGTCACG
GGCGTCATGACGACACGACAGTCACTACTCAGCATCAACCAAGTTGAACG
GGAGACCTGTGTCGCCATAGTAACGGCTTACGATCAAGGGCAAGACCAGA
AGCGCACGTCTGTCGAGGCAAGGCTTCAGTAATTTTGTATGATAGACACA
CACACACACACACAGACACACAGACACACACACACATACATACACACATA
CACACAGACAGATAGACACAAATACTGACACAACTACACATACATACGCA
CACACATACATACACACACACACACACACACGCGCTCGCGCACACAAACA
ACCCATTTTACTTCTCTTTGTCGTGGACTTACTTGGCATTCTCGTTTGTC
AGGTTGTGTTTAACATCACGGATGCCAACCGCCACGACCCGGTGTTTGAG
AGCAGCAGGCTGAGTGACCACTTCAGCGAGTCCTGGAATGTCGCGCGGCG
CGAACTGTTCACGGTCACGGCCATGGACGAGGACAGGGGAGTGAACGGGG
AAGTCTCCTACAGGATCGTGGATGATTACGGTACGGGTGATTGTACTCAA
TAAACAATAACTACTGTCGCCATGTGTTCGGTAGCGTTCGTGTGTGTGTG
TGTGTGTGTGTGTTTGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTTTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTCGATAAACACGGTGA
GTCAAGAATGCATTTATAAATATTTGGTATGTGGGTAGGTCTCGATAAGT
ACTCAGAATGCCTAAATGCTGGGCTCCCTATTGGCCTTTTATAGCACCAC
AACGAGACTTACAATTTTCTTCATGTCCGGGACATAAGTAGTCCGGGACA
AAAATGCATAAAACACGTCAAAAACCAGCCGGATCCGAACCTTTTAGGTC
TGTTTCCAGATTAGCTAAAGATACAAGTGTCTCTCCGGCAATCTACAGTG
ACAGACGTTGCAACGAGTTTTTTCTTGTAGTGTGAAATTGTACATTACGG
CGCGTGTTTGTGTTCCGCCAGGCATCTTCACAGTCCACCAACAGAACCAG
TCCGCGCATGCGCAGGTGTGGGCGAACCGCTCGCTGGACCGCGAGGAGCG
GGACTTCTACAACCTGACCCTGGAGGCGTCTGACGGCGCCGTCATCAACT
CCAGAACCGCGACGGCAACGCTGGAAGTCTGGGTCGACGACGTGAACGAC
AATCCGCCCAAATTCGTCCGGGACAACTTCACAACGGAGGAAATCAAGCT
TCTACCGGTAGGCATTGTTTAGATAATGTCATGGTAAAATTCACTGAAAA
TGCAGCCGTCTCCCCTGCATCTTTCTTCCAGGTGGAATGACCAGTAATCG
AGGAAAAGTACCTTTGACCAACTTCTGACTAATCGCCTCCTACTTCAGTA
GCCATTCGAAATTAGATAATTAAGGCTGTAGCATGTTTACTACGCATGTT
TTTTTGCTATTTTGTTTTCGACTTGTCTGCTTTTGTCGGTGTGTGTCCGT
AGTCATTTGAATACAATGCCAGTATGTGGCAAGATATCCATGAGTCGGAA
GATGACCGCAAAAGTCAGACTTGTCGAAGTGACAGGAAGAAGAGGTCAGA
AGTGAGTACGTAGAAATAGACAGCTACCCATGATGATACCATTTCCGTGT
AAAATTGCAGGACACCTCCGTGGGAACCCACGTGACCCGGGTGAACTCTA
CAGACGAGGATGTCGGGACAAACGCCATTCCGCTGTTCCGGATCGAGTCA
GTCCAGGACATGCACCTCTCAAGTCCTCATCTCTTCACTATCAACAGCCA
GACCGGTGACGTCAACACTTCGGCCACGTTTCCTAACATCACGGAGGACT
ACTTTGTTAATGTATGTATACAATTTAGATGCTTTAGCTGCATTTCGATC
AAAGATATCTAGAAATGACTTCCAGAATAATTGAAGCAAGGCATCGGCAA
AACTTATCTAACATACCATTTGTGTGATCGTTTAGGAACTTTTAGAAACT
TGCGATCCTTTTATCAAATTACAAAGCAACACAAGGAAGACACTGCAGTC
AGATAGGGGCTTCTCACAAATTGAAGGTGAATCACAGATCGGCACACCGA
ATCCCTTGTGACCTTTGACACAATCTTTACAATCTTTCCTGACCTTTTAG
GTCACCCTGAGAGTGGAGGATGCCATGAACCATGACCTCAGACCGGACGA
CCTGACCCTTCGCATCGTTGTTCCCTTCATCAGTACCAACAGGCACTCGC
CGC Coding sequence (CDS) from alignment at Sc0000005:7053969..7058071- >transcript:BL96665_cuf1 ID=transcript:BL96665_cuf1|Name=transcript:BL96665_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1302bp|location=Sequence derived from alignment at Sc0000005:7053969..7058071- (Branchiostoma lanceolatum)
GCACAGGATCACTACAACATCAGCGTTCCGGAAAACAACGACAATAAACA
AGTTCTATCTGCCGTTGCTACGGACGACGACACTGGGACGAACGGTCGAC
TTCGGTACTCCTTAATGGCCTCGGACAATTTCACAATCGGAGAGCTGACC
GGAGACATCTCGTCAACTTTCACGTTCGATCGCGAGTCCGTCTCCTCCTT
CAACCTCACCGTTCTGGCCGTGGATGGAGGAGACCCTCCCCGGTCATCAA
CAGCCGCGGTCTCCATCACAGTAACGGACGTGAACGACAACCCGCCGGTG
TTCCTGGGCACGCCGTACCGTGAAAAGGTGGCAGAGGACACGCCGACTGC
TACTAGTGTATTCACCGTCACTGCAACGGATGCAGACTTTGGAGAAAACG
GAACTTTGTCCTACGGAGAGAACCCAGGTGGCATCTGCGGAGACCTGTTT
CTGGTGGACAGCGTCACGGGCGTCATGACGACACGACAGTCACTACTCAG
CATCAACCAAGTTGAACGGGAGACCTGTGTCGCCATAGTAACGGCTTACG
ATCAAGGGCAAGACCAGAAGCGCACGTCTGTCGAGGTTGTGTTTAACATC
ACGGATGCCAACCGCCACGACCCGGTGTTTGAGAGCAGCAGGCTGAGTGA
CCACTTCAGCGAGTCCTGGAATGTCGCGCGGCGCGAACTGTTCACGGTCA
CGGCCATGGACGAGGACAGGGGAGTGAACGGGGAAGTCTCCTACAGGATC
GTGGATGATTACGGCATCTTCACAGTCCACCAACAGAACCAGTCCGCGCA
TGCGCAGGTGTGGGCGAACCGCTCGCTGGACCGCGAGGAGCGGGACTTCT
ACAACCTGACCCTGGAGGCGTCTGACGGCGCCGTCATCAACTCCAGAACC
GCGACGGCAACGCTGGAAGTCTGGGTCGACGACGTGAACGACAATCCGCC
CAAATTCGTCCGGGACAACTTCACAACGGAGGAAATCAAGCTTCTACCGG
ACACCTCCGTGGGAACCCACGTGACCCGGGTGAACTCTACAGACGAGGAT
GTCGGGACAAACGCCATTCCGCTGTTCCGGATCGAGTCAGTCCAGGACAT
GCACCTCTCAAGTCCTCATCTCTTCACTATCAACAGCCAGACCGGTGACG
TCAACACTTCGGCCACGTTTCCTAACATCACGGAGGACTACTTTGTTAAT
GTCACCCTGAGAGTGGAGGATGCCATGAACCATGACCTCAGACCGGACGA
CCTGACCCTTCGCATCGTTGTTCCCTTCATCAGTACCAACAGGCACTCGC
CG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000005 | genome | Sc0000005:7053969..7058071 - |
Properties
| Property Name | Value |
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| Transcript id | BL96665_cuf1 |
| Biotype | protein_coding |
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