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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96680_cuf2 >transcript:BL96680_cuf2-protein ID=transcript:BL96680_cuf2-protein|Name=transcript:BL96680_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=241bp
CGCMNDYGRYFMLWERWWENGYDCVCEEENVITCIAVTGPPQIEEPCDEF
GPGYKWVLRAGVWGCYCVEYYCLDLTVCFAWGDPHYYLFDGSEHHFQGAC
RYTLAKDYGTSCDFVVEAQNQPVPVTPQYTFVSDVYVEAYGCTIGMHQGR
LVTVDGVLYTPPFSKALGKIQVGLGGLSVHVWLVNYGVIVAYDGVTHVTV
AVPNDYHGQMCGLCGNFNGNPFDDFMKPDGTIVGDVNIFGN Run BLAST on NCBI mRNA from alignment at Sc0000005:5307213..5309445- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96680_cuf2 ID=transcript:BL96680_cuf2|Name=transcript:BL96680_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2233bp|location=Sequence derived from alignment at Sc0000005:5307213..5309445- (Branchiostoma lanceolatum)
AGTGTGGTTGCATGAACGACTACGGGCGTTATTTCATGGTAAGTGCAAGT
TACTGACTAATCTTACAAAGAATTGTCTCAGACAAAAGTGCAAAATGCCT
AGCTAGTCTGTCCACAATTGTAAAAATCCAAAATGTGTATGCTTTGTTGT
TTGTTGACCAGGTACCTTCAAAATCTAAGTAGTCAGATACTCTAGAGTAC
AATCATAAACTGATCCTGAATTTCCAGTTTTGGGCCGTTTCTTCAATTGG
TAGGAATGTCTTGTTGATGGCCGCGGATGGTCTTAGTTGGTGCACATGTC
TCCTGGTTGTAACACCTCCATGAATCATCAATAATCAGGTATTAATGACT
GATTCTAACACCTGCAGCTTTGGGAACGCTGGTGGGAGAACGGATACGAC
TGTGTTTGTGAAGAGGAGAACGTCATCACTTGTATTGCCGTCACTGGACC
CCCGCAAATAGAGGAACCCTGCGATGAGTTTGGTCCAGGCTACAAATGGG
TGCTGAGAGCTGGCGTCTGGGGATGTTATTGTGTGGAATATTATTGCTTG
GGTGAGGCAGCTTCTTATGTTTCTTTTGCTATATTCTAGCTTCTGTTCTG
AAACGTTGGCAAGCTGTTTTGTTTATAGTGATTTGTAGGCTTGTGTTTCT
TCTTCGCCACTGATTGAAATTGTACTAGCAGCAACGAAAATGGTTAACTT
TTCGGAAGCCATTTCTTTAGCCAAATGTCCAATGGCATAACACTAGAATC
CGCTTGTCTGAATAACTACGTTTTTATAACCAATGTTAATGGTGAAGAAG
GGGGATCAATCCAGTCACGTTTAGGGGCCGCACACTTCACATAGCAGCAG
CGACACCTAGTTGTAGTGCGAGGTTGAGGGAGTTAGTGTTACCCTTAGGA
AGGTGGTCACCGAAATATAGGCTAGGTATGAACACTTTTATTGCAGAAAT
GACTTTATTATCTAGTTATTAACCTGATACAACGATTCAAGTTTATGTTT
TTCTTAAAACAATCATTTTATTCCCATGAAAGATTTGACCGTCTGCTTCG
CATGGGGTGATCCACACTACTACCTGTTCGACGGGAGCGAACATCACTTC
CAGGGAGCTTGCAGGTACACCCTAGCGAAGGACTATGGCACCAGCTGTGA
CTTCGTCGTGGAAGCACAGAACCAACCAGTCCCCGTAACGCCACAATATA
CCTTCGTCAGTGACGTGTACGTGGAAGCGTACGGATGTACGATCGGAATG
CATCAAGGGAGACTAGTTACAGTGAGTTACTCGTTACTGTTCCTTGTAAG
TCGCTTTCAGAGGTCATTTTGGAAATTGCATACAAAGGTCTTGCCGTCGT
TTAAGCAACTATGGAAAAAATACTTCTATAACTTACTACTTCGATGACGT
AATTATACATTTATGCTTAAGTGACGTGACCGTCTGCCTGACCTATTTAG
CCGTCCACCATCCGTATTTTGGAAAACGCAACCAACCTTGTTGACCTGGA
CAATTCTGGACTAGACAGAAATTACCCATCTCCTTTTGCTTGAAACAGGA
TCCGGAGTGCATACCTGGATAGATTGTGGGAGTAAGAATCACTCCACCAC
AATTTCTGTACTATTACATACACCAATTGGTTTACGGTAAGACGACAATA
ACTCGTCCTGTTAAGCCATAAAACTATATGTTGTTATCAAACCAAACCAA
ACAGGTTGACGGCGTGCTGTATACACCACCCTTCAGCAAAGCCTTGGGTA
AGATCCAGGTCGGCCTGGGAGGACTCTCTGTCCACGTGTGGCTGGTGAAC
TACGGCGTGATCGTCGCATATGATGGCGTCACCCATGTCACGGTGAGCAT
ATACCGAAGAGTCGACTTCGTGGATTTTGATTTCAATTTACCTCAAGCTA
AATGCATTCAGACTATGATACATGCGTAGGGATAAGATGATAAAGAAAAG
TAATTAAAGAAGTGCGAATAACCTTGCAAAAAGTGATCATTTGGTAAGTC
TCGAAACGTAAAGTTAGACATGCATGAAAGTAATGTATATCTATGCATGT
ATGTATGGCAATTAGTATAGACGCAATGTACATCAACTCTTACGTATATA
CTGCAGGTGGCAGTTCCAAACGACTACCATGGCCAGATGTGTGGTCTGTG
CGGCAACTTCAACGGTAACCCGTTTGACGATTTCATGAAGCCGGACGGGA
CCATTGTCGGGGATGTAAACATCTTTGGGAACA Coding sequence (CDS) from alignment at Sc0000005:5307213..5309445- >transcript:BL96680_cuf2 ID=transcript:BL96680_cuf2|Name=transcript:BL96680_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=723bp|location=Sequence derived from alignment at Sc0000005:5307213..5309445- (Branchiostoma lanceolatum)
TGTGGTTGCATGAACGACTACGGGCGTTATTTCATGCTTTGGGAACGCTG
GTGGGAGAACGGATACGACTGTGTTTGTGAAGAGGAGAACGTCATCACTT
GTATTGCCGTCACTGGACCCCCGCAAATAGAGGAACCCTGCGATGAGTTT
GGTCCAGGCTACAAATGGGTGCTGAGAGCTGGCGTCTGGGGATGTTATTG
TGTGGAATATTATTGCTTGGATTTGACCGTCTGCTTCGCATGGGGTGATC
CACACTACTACCTGTTCGACGGGAGCGAACATCACTTCCAGGGAGCTTGC
AGGTACACCCTAGCGAAGGACTATGGCACCAGCTGTGACTTCGTCGTGGA
AGCACAGAACCAACCAGTCCCCGTAACGCCACAATATACCTTCGTCAGTG
ACGTGTACGTGGAAGCGTACGGATGTACGATCGGAATGCATCAAGGGAGA
CTAGTTACAGTTGACGGCGTGCTGTATACACCACCCTTCAGCAAAGCCTT
GGGTAAGATCCAGGTCGGCCTGGGAGGACTCTCTGTCCACGTGTGGCTGG
TGAACTACGGCGTGATCGTCGCATATGATGGCGTCACCCATGTCACGGTG
GCAGTTCCAAACGACTACCATGGCCAGATGTGTGGTCTGTGCGGCAACTT
CAACGGTAACCCGTTTGACGATTTCATGAAGCCGGACGGGACCATTGTCG
GGGATGTAAACATCTTTGGGAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:5307213..5309445 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96680_cuf2 |
| Biotype | protein_coding |
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