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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96689_cuf12 >transcript:BL96689_cuf12-protein ID=transcript:BL96689_cuf12-protein|Name=transcript:BL96689_cuf12|organism=Branchiostoma lanceolatum|type=polypeptide|length=147bp
SPPSAPENGALSPEGETSYDYQDEVTFSCNQGYELDGAASVTCQADREWS
APVPTCEPVLAEIEESDADDDTHGGMCDPNPCYNGAACTDGDDDFACTCL
PGFAGEWCGININECDPDPCQNGGACTDGVASYTCDCAAGFEGAQCE Run BLAST on NCBI mRNA from alignment at Sc0000005:5351040..5353620- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96689_cuf12 ID=transcript:BL96689_cuf12|Name=transcript:BL96689_cuf12|organism=Branchiostoma lanceolatum|type=mRNA|length=2581bp|location=Sequence derived from alignment at Sc0000005:5351040..5353620- (Branchiostoma lanceolatum)
TCGCCACCGTCGGCCCCAGAAAACGGAGCGCTGAGTCCTGAGGGAGAGAC
CTCCTACGACTACCAGGACGAGGTTACGTTCTCCTGTAACCAGGGCTATG
AGCTGGACGGAGCCGCCAGTGTGACGTGTCAAGCTGACCGAGAATGGAGT
GCACCTGTTCCAACATGTGATCGTATGTTAATAATGATGATTCTAACCAT
CCGATAATATATCGACTAAAAGACGCTAGCGTCATTGGCTTAGTTTGATA
GCATTTATATTATTGTAATATACTAGTATATCCTGTTCTACAAGTGCATG
TTTTAACATTTATTGAACCTGCGATCAGTATTCCGTTTGAAAACCTTTTT
GTATGGTTTCAGCTGTGCAGTGCTCGCCGCCGACGGCCCCAGAAAACGGA
GCGCTGAGTCCTGAAGGAGCGGACTCCTACGACTACCAGGAAGAGGTGAC
GTTCTCCTGTAACCAGGGCTATGAGCTGGACGGAGCCGCCAGTGTGACGT
GCCAAGCTGACCGAGAATGGAGTGCACCTCTTCCAGCATGCAAACGTTAA
TGATTTTTTTAGCCATACGATAATAGACCTACCTTACATAAGCATGCAGT
GTGACGTGTCAAGCTGACCGACAATGTAGTGATTCTGTACCAACATGCGA
ACGTATGTTTAAGATCAATCATGTTTCTAACTACACCATTATAGTCTTAG
ACCGCCAAGACTGCGAGGCCTTTGGGACACGTTTATAGCATTGTAGTTAA
TTGTAGCGTACTAGTATATTCCGTTATGTACGTAAATGCGTTTACAACAG
AGCCTACAATCAAAATGCCCTTCACCAACAATTAGATATAATTTCAGCCG
TACAATGCTCGCCACCGACGGCCCCAGAAAACGGAGCGCTGAGTCCTGAA
GGAGCGGACTCCTACGACTACCAGGACGAGGTTACATTCTCCTGTAACCA
GGGCTATGAGCTGGACGGAGCCGCAAGTGTGACGTGCCAAGCTGACCGAG
AATGGAGTGCTCCTGTTCCAGCATGTGAACGTATGTTGAGGATCATTGAT
GACTCTAACCATACGTGGCGATAATAGACTTAAAGGCATCTACTATAGAC
TGGTAAATAGTATTGTAGTTCACTCTCCTGTTATGGATGCGTGTTTTTAC
AATAAAGTCAACTATCAAATTGGCCTTTATGTATGCTTTCAGCTGTGCAA
TGCTCGCCGCCGACGGCCCCAGAAAACGGAGCGCTGAGTTCTGAAGGAGA
GACCTCCTACGACTACCAGGACGAGGTTACGTTCTCCTGTAACCAGGGCT
ATGAGCTGGACGGAGTCTCCAGTGTGACGTGCCAAGCTGACCGACAATGG
AGTGATTCTGTTCCAACATGTAAACGTATGTTGATAATGATGATTCTAAC
CATCCGATAATATATCGATTAAAAGACGCTAGCGTCATTGGCTTAGTTTG
ATAGCATTTCTATTATTGTAATGTACTAGTATATCCTGTTATACAAGGGC
ATGTTTTAACATTTATTGAACCTGCGATCAGTATGCCGTTTGAAAACCTT
TTTGTATGGTTTCAGCTGTGCAGTGCTCGCCGCCGACGGCCCCAGAAAAC
GGAGCGCTGAGTCCTGAAGGAGCGACTTCCTTCGACTACCAGGACGAGGT
GACGTTCTCCTGTAACCAGGGCTATGAGCTGGACGGAGCCTCCAGTGTGA
CGTGCCAAGCTGACCGAGAATGGAGTGCACCTGTTCCAACATGTGAACGT
ATGTTAACGACGAAATTATCTTCTCGCAACACGACTACTTTGGTGCACCT
TAAGTAAATTGCATTGTAGTGATTTGGAACGTTAAATCTGGTATGTATTT
GGATGTTTCAAGAACAAAGTCTACAATCAAAGCCTATCGCAGCCACATAA
TGAAGACAAATCTATCATTACTGAGAGAAAAATATGAGATATGCACATCT
TTCTTTGGTTTTGTAGCTGTACTTGCAGAAATTGAAGAGTCTGATGCTGA
TGATGACACCCATGGTGGAATGTGCGACCCGAACCCGTGTTATAACGGTG
CCGCCTGTACGGACGGGGATGACGACTTCGCCTGCACCTGTCTGCCGGGA
TTCGCTGGGGAGTGGTGCGGGATAAGTACGGGACTTTTGTACCCATTGGT
TTTCCAAAAGCATCATAAAATTTGCAAAAAAATGATGAAATTTGAACGTC
ATCCCCCAATAATGTAATGAAAAATGATGACGAAAATGTATTACGTTCCA
GCTACCGGAACGTTGCCGTTGCGTTTTTGATACGAAATGTACAATTTTCA
GTCGTTCTTTGTTTGTGTTTTTGTTGAGAGTAAACATATTCCATGGCTCT
AAAGAAATAGGAACGGGTATGATAGAACATCCAATCGGCTAGCGGTGCAC
TGAGAATTATCTAGAATTGGTGCAGTGAAATATGTAGTGTTACTAAATGT
TTTTGTGTGTGTTTGATTCAGATATCAACGAGTGCGACCCTGACCCTTGT
CAGAACGGAGGGGCCTGCACCGACGGCGTGGCTTCGTACACTTGTGACTG
TGCGGCGGGATTTGAAGGAGCTCAGTGTGAA Coding sequence (CDS) from alignment at Sc0000005:5351040..5353620- >transcript:BL96689_cuf12 ID=transcript:BL96689_cuf12|Name=transcript:BL96689_cuf12|organism=Branchiostoma lanceolatum|type=CDS|length=441bp|location=Sequence derived from alignment at Sc0000005:5351040..5353620- (Branchiostoma lanceolatum)
TCGCCACCGTCGGCCCCAGAAAACGGAGCGCTGAGTCCTGAGGGAGAGAC
CTCCTACGACTACCAGGACGAGGTTACGTTCTCCTGTAACCAGGGCTATG
AGCTGGACGGAGCCGCCAGTGTGACGTGTCAAGCTGACCGAGAATGGAGT
GCACCTGTTCCAACATGCGAACCTGTACTTGCAGAAATTGAAGAGTCTGA
TGCTGATGATGACACCCATGGTGGAATGTGCGACCCGAACCCGTGTTATA
ACGGTGCCGCCTGTACGGACGGGGATGACGACTTCGCCTGCACCTGTCTG
CCGGGATTCGCTGGGGAGTGGTGCGGGATAAATATCAACGAGTGCGACCC
TGACCCTTGTCAGAACGGAGGGGCCTGCACCGACGGCGTGGCTTCGTACA
CTTGTGACTGTGCGGCGGGATTTGAAGGAGCTCAGTGTGAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000005 | genome | Sc0000005:5351040..5353620 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96689_cuf12 |
| Biotype | protein_coding |
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