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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96699_cuf15 >transcript:BL96699_cuf15-protein ID=transcript:BL96699_cuf15-protein|Name=transcript:BL96699_cuf15|organism=Branchiostoma lanceolatum|type=polypeptide|length=102bp
VTLPKGYVPKPYISLGCWKDTGNRAIPTLEGKDARLDGSYRARANAIDKC
YQVAKSRGFQVFAVQHGGWCAGSATALSTYKKYGPSATCKKDGEGGPWGN
EV Run BLAST on NCBI mRNA from alignment at Sc0000016:461915..465199- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96699_cuf15 ID=transcript:BL96699_cuf15|Name=transcript:BL96699_cuf15|organism=Branchiostoma lanceolatum|type=mRNA|length=3285bp|location=Sequence derived from alignment at Sc0000016:461915..465199- (Branchiostoma lanceolatum)
CCGTAACGTTACCTAAGGGTAAGTCGTTCAACATTTTCAACGAGATCAAT
CAGAATTCAATTTATGTTCTACATTTTGCTTCTTATAGACCACGTGTGGT
CATCTGGGCAGGGATATGCAAGACTATTATTATTATAATTATCATTAACA
TTTCCTGTGGTTTCAGTCTTGAAGACTTCATGTAAATAACCGATGTCAGA
TGTCAGAGTTTAATCGACTCGACTTGCCACACCTTACGTTGAACGTTGAA
CATGTCTCCACAGGATATGTCCCCAAGCCTTACATAAGTCTTGGCTGCTG
GAAGGACACGGGAAACCGCGCCATTCCGACTCTAGAGGGGAAAGACGCCC
GTTTGGACGGCAGCTATCGCGCACGCGCCAACGCCGTCGACAAGTGCTAT
CAGGTGGCCAAGTCTCGCGGCTTCCAAGTGTTTGCGGTCCAACATGGCGG
CTGGTGTGCCGGATCGGCTACTGCCCTCGGCACGTACAAGAAGTACGGCC
CCTCGGCAACCTGTAAGAAGGACGGGGAAGGCGGACCCTGGGGAAATGAG
GTTTATCTCATCTCAGGTATGGGGTCTTCTGCCTGGTACTAGATAGTGTC
TTTTTAATACATCTCATTCAATTGGCTTCAATTAGGATAAAGTTTCGATA
AGGACGATGTAAACCATGTCCATAATATTTTTTATGACGATTGTCTACAA
CCTTCATACCTCGAAATAGCTAATAGATTGACATTTTATCTTTCAGATGT
TTTCGTCTCCAACAAAGGAGGTAAGTCTGGCAAAACGCTGAGCACCTAGC
TCCTAACGTAACGTAACGTATCATAACCCGTTATAACAAATATGATGTAA
TTCTTCCCCATCCTATACCATTACGCTTCCTGAACACAATCACCGCTTCC
CATTATAGTCAGTTCATTATAAGTTGATTTTGAGCCTGCTTGTGGCCGGC
TTCAGTATTGCAGCAGGCCGTCTGGTTTGCAGATCTTCTGCCATGGACAT
ACTAGGGTCTTGATTTTCCAGTGGATGGTAGCTTTTGATATAAGGAAGAA
GTGGCCCGGATTTAGGTCTCCCAGTAGATTGTTATGGAACTACAGGGTCG
TTTGTGTTCAACTATTTTATGAGGAACACACTGACTAAATCGCTGACGGA
TTTCCATAATATTTAGTGTGCATGTATTTAAGACATATATAAACACTATC
AAAGAAAACCATGCAAATTAGAACTTATTTTGCATGATTATTGAGGAAAA
CCTATTGCCATTGTTTCCCGTAACATAATGCCATATTCAATACATGAAAC
GTAAAGTTATTATTATGTAATCAACTCCAGGTTGATTATGAAATCAACTC
CATTAACAAATACCAATTTTCCTCCCCACAGGTGGAGAAGTTGAGAAAGT
CGAAAGTGAAGAGGTGGCCCAGGTCCAAGGTCCGAAGTACATCAGCCTGG
GCTGCTGGAAAGACACCGGCAATCGAGCCATCCCAACGTTAGAGAACACA
GACGCCCGGCTGGACGGGTCTTACCGCGCCCGTGCTAACGCCATCGAGAA
GTGCTACCAGGTGCGCAGGTGTTCTGTTTATTCTAGCAATACCAAAAACG
TCGCCCCTGGACCCTTTTTGGTGTGTTGTGGGGGGATATTGATAATATCA
TGCAACGTGGAAAGGCCAAATCATAAAATTATGCCGTTTATAGAATTAGA
ATAGTATAACATAAGGATTGTTTAAACATCGCTTTGAAATGATAGAAAAA
AAAAGGTGCTACAAGAAATAGTCCGACAAGGAAGCAGAGTAGTTGAGTAT
AGTATTAGTAGAGAAGTAACTAACCTGAGGTACAACTTTAATAACAAGTC
GCATATCAATGTTTATCTAACGAGGAAACTGTTTGAGTTTGAGTTTATTG
GGATGCACAATTAGCTTAACAGCTCCTCTTCCTGTTGTACATACAAAAAC
ATGACTGGACAAAACTACATGACACACAGGAACACAACATATACAGAATA
TACATGTTCATAAATGATAAAAGAAAGATAAGGCTACTTGAAGTCTATAT
ACAATGTTGACAATATCTAACTGTTCCCATACAGGTGGCCAAGTCTCGCG
GGTTCTCCGTCTTTGCTGTCCAACATGGCGGTTGGTGTGCCGGAACTGCT
ACTGCCTTTAGCACGTACAAGAAGTACGGCCCGTCGGCAACCTGTAAGAA
CGACGGAGAAGGCGGACCCTGGGGAAATGAGGTTTATCTCATCTCAGGTA
TGGTGTCTTCTGCCTGGAACCAAATAGTGTCTTTTTAATACATCTCATTC
AATTCGGTTCAATTAGGATAAAGTTTCACGAAGTCTACCTGATTACAGGT
TAGGCAGAACATCCTTTAAAACATGGAGACTCGACATTATAGCAATCTGA
TCTGTGTGCATTGTAATAGACTCAAAACTAAACCCCTCCGAACCTCAGAG
ATTTCAGAATTAACCGCACTGCCCGTTTTATTTGTGCCCCTTTCAGTCTT
ACTAAGAAAACTGCAGCACTGGATATATAAGCCCATGCTTAACTTATCTT
TTTTAAAGGCACTCGTAGAGACAGACAGACCCACAGAAAGACATTGTGAT
GCTTCGATCCCAAGCTTGAGGAAAAATAATGGTGCAGTTTATGACCAGAC
GGGCTAGTGTCATAGTCCCCGCTACTTACGTTAATTTGAAAAGAACTAGT
TATAATATTTAGAAAAAGTTCATGTATCAAAGTTTTCCTTTAAAAACTGA
GATAGATAAATGAATGAATCAATGCATAATTCTTATCACCTTTTCTTTTA
TTTGTTCCAGGCGCCCCCGTTGCTTTGCCTAAGGGTAAGTCGTTCAACGT
CTTTTATCTGAAACATTCTACATGAACAGTTCCTGTGGTTTCAGTCTTGG
AGCCTTCTTTCATTTAGCATGCAAATTACCAAAGTCAGATTTTAATCAAC
TCGACTTGACACACCTTACGTTGAACGTTGAACATGTCTCCACAGGATAT
GTCCCCAAGCCTTACATCAGTCTTGGCTGCTGGAAGGACACGGGAAACCG
CGCCATTCCGACTCTAGAGGGGAAAGACGCCCGTTTGGACGGCAGCTATC
GCGCACGTGCCAACGCCATCGACAAGTGCTATCAGGTGGCCAAGTCTCGC
GGCTTCCAAGTGTTTGCTGTCCAACATGGCGGCTGGTGTGCCGGGTCGGC
TACTGCCCTCAGCACGTACAAGAAGTACGGCCCCTCGGCAACCTGTAAGA
AGGACGGGGAAGGCGGACCCTGGGGAAATGAGGTT Coding sequence (CDS) from alignment at Sc0000016:461915..465199- >transcript:BL96699_cuf15 ID=transcript:BL96699_cuf15|Name=transcript:BL96699_cuf15|organism=Branchiostoma lanceolatum|type=CDS|length=306bp|location=Sequence derived from alignment at Sc0000016:461915..465199- (Branchiostoma lanceolatum)
GTAACGTTACCTAAGGGATATGTCCCCAAGCCTTACATCAGTCTTGGCTG
CTGGAAGGACACGGGAAACCGCGCCATTCCGACTCTAGAGGGGAAAGACG
CCCGTTTGGACGGCAGCTATCGCGCACGTGCCAACGCCATCGACAAGTGC
TATCAGGTGGCCAAGTCTCGCGGCTTCCAAGTGTTTGCTGTCCAACATGG
CGGCTGGTGTGCCGGGTCGGCTACTGCCCTCAGCACGTACAAGAAGTACG
GCCCCTCGGCAACCTGTAAGAAGGACGGGGAAGGCGGACCCTGGGGAAAT
GAGGTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000016 | genome | Sc0000016:461915..465199 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96699_cuf15 |
| Biotype | protein_coding |
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