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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96701_cuf10 >transcript:BL96701_cuf10-protein ID=transcript:BL96701_cuf10-protein|Name=transcript:BL96701_cuf10|organism=Branchiostoma lanceolatum|type=polypeptide|length=298bp
GGVEPCDDGASGTWVAWSMWSTCRGPCGLGRQYRTRRCKPKEHSPLEGWM
VAACSGDGREKKDCVPEGCPVHGGWSKWSNWTDCSVSCGRGVKARARDCN
TPVPLNGGRACEGKDTEEAPCDEGLCPVDGGWSSWSQWLVCTATCGIGTQ
IRLRACDSPLPRHGGKNCSGSHEDLRVCKREPCPEGNDEPNKWSDWSEWS
GCSVTCGKGMALRTRKCPDGGCAGRDTEEKDCNTDCSQFTWTKWSDWTSC
TKTCGKGIQQRTRTCADPSTGNQADVCDGDGSQKRGCNAQRCRGRACL Run BLAST on NCBI mRNA from alignment at Sc0000016:3504905..3511146- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96701_cuf10 ID=transcript:BL96701_cuf10|Name=transcript:BL96701_cuf10|organism=Branchiostoma lanceolatum|type=mRNA|length=6242bp|location=Sequence derived from alignment at Sc0000016:3504905..3511146- (Branchiostoma lanceolatum)
GCGGCGGCGTCGAGCCGTGCGACGACGGAGGTAGACATTTTCCTGTTTCA
CTACACGGTTGAAATTCATCCCAATCACGCGTTGAGGAAAAAAAGTTCTC
TTCAAAGGAGAAGTGGTAGCCTGATAACTAATTAAATATGACGATAACAT
TCGTCGTAGTCCGTCGTAAGATTTGCATTTAGATGTCGTTCAGATTCCAA
CCAGGCTGTGACAGAACAAGCCACAGACAAGAGTCTTCTAGGTAACAAGA
CAGGTGAATTTGCATGAAACATGCACGACTGTGTTACGAATGCTCTCAGT
TTACGATCGTACGACGTTCACACGACGAGTGTGTGACCGGGCCAAGTTGC
AATGTAAAAGAAAGAGAAAACAGTATCATCAATCCTGGAACTGGAGCTAA
CTCCTAACTCAACACCCGTCTTTTAAACCGTAGATCAGAACTAAAGGGGC
CATGGGTTCTGTCAAATCATTCAAGGACTATCTATTATTTTGCCAGCTTC
ACTTTATTTACCAGTGATTGTGGTTCTATTGGGTTCCTTTACTGTTGAAG
TTGGACAATGGTAGGCTTTAGATGCAGTTCATTGAATACAATGTTGCTAC
ATGTATTATTGGTAGAACGCTCAAGCTAGTCGGAATGATAGAGCAGCTAG
GGTTGGTGACTATATTTTTAACGAAGATGTGACTCTTCAAGAATGGATTA
AATAGTTGTTTAAGTGACGACGATGTTGTTGGCGACAGTTGGACGAGTAT
GGCTTCCCGGCAGCAAACGGTGCTCTCTGAATACTGTCACAGATTGAACT
ACCATATCCAACACGACAATCCGGACATTATCTTTGTCTTCAATCTTCAA
TGAATACTTGATAGCGCGGAAACGTGTTCTTGATTTGGACTTTCACGGCT
GCATATTGCGACCCAATGAGATCGATGATTGTAGCTGTGACATGGCTGTT
GATTCTACGGATAAACGTCAGCCGAAAAATACCACGAATGACTGTCTTGT
TGGATATTTCCTGCCCCTTATTAGTCGTACTTTCCGTCCTAACTGCCCTT
GACGGCTCTCCCAATCTGCTCTGTTTCTCTCTTGTCCTCACCACACTACA
AAGAACTTTCACAATCGCACTCTCTCTGCTAGTCTGGAAACGTAGTTTTT
AGGGTATTTCAAATCACCCTATGCACAACGCACCTACCACTGTACGTCTA
CACTCCGGTAGAAATCTTTGCACACTTTACGCACCATTTCTCGCATCCAT
GTTCAACCTGTTGCACTTAAAAAGCATTTGAAAGCTAACACATTTAGCGA
ACAAGTTACTTTCACCCCGCTGCATGTAGCAACCCTCTTCCCACACAGCA
CAAGGCGTCAGGGAAGTGATATTCTAAAACTGAAGATATCAGGCGCTGCA
GGATGTCTTGGCAAGTTGCGATTATCATGCGACATTCCAGATATCTTCAT
TTGAATGAGGAAATACGTCTATTGTGTTTTGCTTCGAACCTTGCGAATGC
CTCCTGATACAAATCAAAAGCATCGTTATTTGTTTGTTGAACATTTCTCA
AAACTAAACAAAATTGTTTTTGAATGAAACTATTCTGCGTCGATTGACAT
GAGGTTTAAGGAAAGTTTACAATATTATGAAAAAAGTTGTCCTATTTTTT
GTTTAGTTTAAAAAAAAAGCAAAGTATCAAACACCTTTGACCAAGCCAAA
CCTGAAACTCGACCCGAAAGTCTGTTGCATGCCCGTCGCAACTTCTGCTC
GAGTCCGTCCTGCGGCGTCTGATATCTCACCGGTTGCTCCTCACCGCTTC
ATGACGACTTGCTCCGGCGCTTCCTTCTAGCCAGCGGCACCTGGGTAGCA
TGGTCCATGTGGTCCACGTGCCGCGGCCCCTGCGGACTGGGCAGGCAGTA
CCGGACCCGCCGCTGTAAGCCCAAGGAACACTCCCCCCTGGAGGGATGGA
TGGTCGCGGCTTGCTCTGGAGACGGACGGGAGAAAAAGGATTGCGTCCCG
GAAGGCTGTCCTGGTAAATGTCCCTCAGCTCTTCCTGGATTTTCAGCAAT
CTCTGTTTTCTTTCCTGTCCCTCTCGCGGTCTTGTCTCTCCACTTGAAGC
TCCACCTTTCCATGTCCATGCACTCACCTCATCAAGCCAAGTTGTTGTTA
TAGCTACATACCGAGAATGTAGTCACTCGAACTCAAGCATGCAAGTTCGC
ATGTATAAGGATCATATACCGTACGTAGGTTCCATAAGGTGTGAGAGTGT
CTCCAATGATGAATCGTGCACAATTCAAGAGATTCTGATGCAACGTTGAT
CAAATATCATGTTCTTGATGCGTGCTCATTGGTCATGATCACCAACTTAA
GCAACGTTTCCATAGAGTGAGTTGGCTTTGTGTCATGTTCCTTATTTCCA
ATTGTCCAATTATGGGACGAAGTAAGCTTAAGGTAAAAGATGCCAATTTT
CTGAAAATACCTATCTAGTGATATTCAGTTATCTTAAATGTAGGAGTCAC
AAGGTATTCTTAGCTTTCAGTAACAGAATTGCAAATGTGCATTCAAATAT
TGTCTTAGCACCATGAGCTTTTTGCAGAAGTTAACTTTGGGGGCCTCAAA
GAGTAATGTCAAACACTTTTCACGACGAGTTTTTGTCAAAACGTCACACT
CCTTCCATAACGTATCAGATTAAATTACCTTAGTAATAACAATTCTCTGT
TGTCCGCTATTTTCGTCAAATGACTCTTTCTTGTTTGTTGGTCTTCTGTT
TCCCCACGCTTCGCAATCCTCGCAAGTTATACCCCCTACAGGTGTTCATT
CAACCTTAACGAAGCCAGTTGCCATGAAACATAACAAAGCATGCTACGTT
ATTATGATAGACACGATTGATATATGACACAAAGAGTAAACTGCTTTTCT
GTACGCTAATTGTTTATGTTATCAATACACTACAGCTACATACATCAGAT
TGCACTATGGAATGTTTAACTACATATATGTCAATAATCTGTTCAATTTT
CACGGCTAACGTCGAGATAGAAGACTTCAAGGTAAACAGTACTAAACACG
TTTGACTAACATTTTGCATTATATAATATCTATATCGTGGATACTTCGTC
TGATTTCATGAAAATCCCGACAAAGAGAATACGGCTTTGCAGCAATTGGC
GGCTAGCTTCTTCGTACTATGTTAGACTACAGCCATCATCACTACATTAA
TTCCATAGATAGTCTAGTACGATCGCTCAACTGTCAAAGTTCACCACGTA
TACGTAGAGTAGGCAACACAGTTATCGTACTGAGTAGAAATCCAGCAATG
CCATTGATAGAATAGCAGGGTTTCTATAAGAATGGCAGAGCTTGGAGTTC
ATAGTTAGTACTGCTAGTTCGGATAATCTCCAAGCAGATCTTTGGGGCAA
AATCGTAACGGTTTCTAACTGTACCCAATATCAAAGGGCCGTGTGATCAG
ACCTCGGGTCCTATCAGAAATCGTCAAGGTTTTGCCCCAAATGATCTGCT
TACAGATTAGGTTCGAATCCTTAGTATAACACTAAGGTTACAGTCATCCC
TTTTATCTAAACGTCGCCCCGATGTTTTCTCACACAGTCCACGGAGGTTG
GAGTAAGTGGTCTAACTGGACGGACTGCAGCGTGAGTTGCGGGCGCGGAG
TGAAGGCGCGGGCCCGGGACTGTAACACGCCGGTGCCGCTGAACGGCGGG
AGGGCCTGCGAGGGGAAGGACACGGAGGAGGCGCCGTGCGACGAGGGGCT
CTGTCCTGGTAACCTATTGGCCATTTGGCTTTCGAGCTGGTAATGCATGT
ATCGAGGACTTCCAGAATTCAAAGAGACAAGCGTGTTTTCTTTAAGCGTT
TTCTTTTACCTGAGAATCCACCTTACTATATTGAACCGGGCTCGGTGACC
TGTAAACATCGGTTGATTACTCAAAATCGTGACGTGATCAGCTGTATCAC
TGCAAAAATGTCCTTTTAGATTTCGCAAACTTGTCGGACAAGCCAGTCTC
CTGTGACGCAGCTTTATGACTGTGACTAGTATGACCACAGTCAGCTCGTT
ATGTCTTCGCCTTAAACTTTAAGCTAGGTCTTGATTTAATCATGTTGCAA
CGTACCATTGTTTTATTCTGTTTGCCTAGTTGACGGCGGCTGGTCGAGCT
GGTCCCAGTGGTTGGTGTGCACGGCCACGTGCGGCATCGGGACCCAGATC
CGCCTGCGGGCCTGCGACTCGCCCCTCCCGCGGCACGGCGGGAAGAACTG
CTCCGGGTCGCACGAGGACCTCCGCGTCTGCAAGAGGGAGCCGTGTCCGG
AGGGAAATGACGAACCGAGTATGTTCGTGAAGTAGTTCCGGTTATGCATT
GAATTCAGTTTCATATAAGATCTATTATCTATAAAAATGTCTAGACGTTA
GAAATTTCTCCAATGATTATAAAGGCCCATTCTCATCTCACACTACACAC
TCTTGTGTCAGGTAGATTAGCCTTATGGAACTGTAGTTATGTACCAGTAG
ATGCCATACTTTGTACCTTCTACAATTGTTGTGCAATAAAGTTGTATAAT
CACCGAACACTGCACAATTTTAAATATGACAATCAAAAACTAACAATACT
TACTTACTTATCCTCTTCGTCCCCGGGGAGACATAAGGCCATGACGTTTT
TCTTCCATCTGGGTATGTCCTGCTCCATGGTCTAAGCTTATTACCAGGAG
AGCCCCATTTTAATTGTGAAAATGAGAAAAACAAAAAACGTGCTTCTTCT
ATTTTACCTGTCCTAGACTGTACTTATTTTATTGTCCTTGGGCAAATTCA
AAAATATGTTGGGAATATCATAAATCAAAAACGCTGACGGCTGGAGAAGA
AAAAAATGCGTCATAATCTTTGTCGATTTCAAATTGCAGACAAGTGGTCT
GATTGGTCGGAGTGGTCCGGCTGCAGCGTGACGTGTGGTAAGGGCATGGC
CCTCAGGACGCGGAAGTGCCCGGATGGAGGGTGCGCCGGGCGGGACACGG
AGGAGAAAGACTGCAACACGGACTGTTCGCGTGAGTTCAGTGGCCTCATG
TTGATGCGCGAAATTCAACCTCAAGCATATGTCTTTGTTACTTTTTCAGT
AGACCTCTTTCCAAGCTCTGATACGTTGGGCGGAAACGACGGCCGGGCAG
CAAAACATTTTTATACCTTTGTTCTGTACCTTGTTTTACCACCCTCATTA
TTTTCGCCCTACGAGTGTAGAAATGGATCTGTTTGGCCAACAATACAATA
GCTAATTAATATAACGTTAGAATGTTTTTATGAAGGAAAAATGCGAATAA
GCTAATATGACCATGTGATTTTAGCCTTCTTAAGATTTAACGGTCCCCAA
CTCATCCCATTTCGCTCATCCAATTACATATGTATTTCTTTTAACGTATG
TCAACTTCAAACTGTCCTAGAATGGCTTCTGACCTTTGTTGCGTGGTGGC
CCTTAGTATTTCAAAGAGGAAACAATATTTAGATGTGGTCTGTGTCATCA
AATCTACGCTGTACGGACTGTTATTGTTTTCCCATAGAGTTCACCTGGAC
GAAGTGGTCGGACTGGACAAGTTGCACGAAGACTTGCGGAAAGGGCATCC
AGCAGAGAACCCGCACATGCGCAGACCCGAGCACGGGGAACCAGGCCGAC
GTGTGTGACGGAGACGGGAGTCAGAAGAGGGGCTGTAACGCCCAGCGGTG
CAGAGGTAGGGCGTGCCTGTAACCGACTAATATCCAATCTCTAAAGGTTC
ATATTGGGCAAGCAAACATCACAACTGGGCATGACGTGAGGTCCGGTTAA
TCTATAGCAACAATATACTTACATTGTTGTCAAATAAACTAATCTGAATA
CAGAAGTGGAAAATCTGTAGCCTTTCAAACCCTCAATGCGATGCCGTTGT
TGTGTGTAGTCGCCCAGTCCAGCCTTCGTTAAAATTGAGCATCAAACATA
TGATGTTTATGTAAGATTGGCAAAAACAGCAAATGAAAGATAAAAGCAAC
AACCATTAACTTCTAAGATAAACTACCAAAGTAGACTAAAAGTGGAACGT
TAAAATGGAGGAAAGGGTTCGATAACTTGTCTTAAATCTAACAATCTCTG
ACAAGTAGCTCCAACCCTGTTGTCATCAGAGGACCGTGACAGGAGCAACT
GGGAAGACTGGTCGCCCTGGGAGAAGTGCAGCGTGTCCTGCGGCGTCGGC
GTCCGTTTCCGCTTCCGGAAATGCAAGGATCCAAACGGCAAG Coding sequence (CDS) from alignment at Sc0000016:3504905..3511146- >transcript:BL96701_cuf10 ID=transcript:BL96701_cuf10|Name=transcript:BL96701_cuf10|organism=Branchiostoma lanceolatum|type=CDS|length=897bp|location=Sequence derived from alignment at Sc0000016:3504905..3511146- (Branchiostoma lanceolatum)
GGCGGCGTCGAGCCGTGCGACGACGGAGCCAGCGGCACCTGGGTAGCATG
GTCCATGTGGTCCACGTGCCGCGGCCCCTGCGGACTGGGCAGGCAGTACC
GGACCCGCCGCTGTAAGCCCAAGGAACACTCCCCCCTGGAGGGATGGATG
GTCGCGGCTTGCTCTGGAGACGGACGGGAGAAAAAGGATTGCGTCCCGGA
AGGCTGTCCTGTCCACGGAGGTTGGAGTAAGTGGTCTAACTGGACGGACT
GCAGCGTGAGTTGCGGGCGCGGAGTGAAGGCGCGGGCCCGGGACTGTAAC
ACGCCGGTGCCGCTGAACGGCGGGAGGGCCTGCGAGGGGAAGGACACGGA
GGAGGCGCCGTGCGACGAGGGGCTCTGTCCTGTTGACGGCGGCTGGTCGA
GCTGGTCCCAGTGGTTGGTGTGCACGGCCACGTGCGGCATCGGGACCCAG
ATCCGCCTGCGGGCCTGCGACTCGCCCCTCCCGCGGCACGGCGGGAAGAA
CTGCTCCGGGTCGCACGAGGACCTCCGCGTCTGCAAGAGGGAGCCGTGTC
CGGAGGGAAATGACGAACCGAACAAGTGGTCTGATTGGTCGGAGTGGTCC
GGCTGCAGCGTGACGTGTGGTAAGGGCATGGCCCTCAGGACGCGGAAGTG
CCCGGATGGAGGGTGCGCCGGGCGGGACACGGAGGAGAAAGACTGCAACA
CGGACTGTTCGCAGTTCACCTGGACGAAGTGGTCGGACTGGACAAGTTGC
ACGAAGACTTGCGGAAAGGGCATCCAGCAGAGAACCCGCACATGCGCAGA
CCCGAGCACGGGGAACCAGGCCGACGTGTGTGACGGAGACGGGAGTCAGA
AGAGGGGCTGTAACGCCCAGCGGTGCAGAGGTAGGGCGTGCCTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000016 | genome | Sc0000016:3504905..3511146 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96701_cuf10 |
| Biotype | protein_coding |
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