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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96749_cuf7 >transcript:BL96749_cuf7-protein ID=transcript:BL96749_cuf7-protein|Name=transcript:BL96749_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=384bp
QVNGEDLRELTHHQACRVLRKPCPLIRLTILRERVAEERTTGAEVQETIR
VELTKTSGEQLGIRIAGLQGSTGVCVRDLVEGGLAATDGRLRPSDVILEI
NGQDMRQATSEQAAELIQSCVEKVDFVVSRPRRPQPPDLIKGMLEADTSA
KAPDDASPPSFQDKLISIRKTARESLGISVAGGRAGTRGDVPVFVTNVQP
DGCLGGNGQLKKGDILVSINGTTLVGLTHEEAVGVLRASALSQCILLRAM
APARDGDSDEEEEDDFDEEDPTTGKTPSWIMWMRLPEICQVPKSVQLERG
QSGSLGFSIVGGCDGIHGKQPILVKSIVPGGSADRDGRLRCGDLILSANG
HLMTSISHTMSVTLLKRLQGSVMLAVVSWPGTML Run BLAST on NCBI mRNA from alignment at Sc0000068:179898..186337+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96749_cuf7 ID=transcript:BL96749_cuf7|Name=transcript:BL96749_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=6440bp|location=Sequence derived from alignment at Sc0000068:179898..186337+ (Branchiostoma lanceolatum)
CCAGGTGAATGGGGAGGACCTGCGTGAGCTGACCCACCACCAGGCCTGCA
GGGTGCTGAGGAAGCCCTGTCCCCTGATCAGACTCACCATCCTGAGGGAG
AGGGTAGCCGAGGAGAGGACCACGGGGGCTGAAGTGCAGGAGACAATCAG
GGTGGAGCTCACGAAAACTTCAGGTAATGGGAAATTATAGTTACCTCCAT
GAAAACCGAGATATTGTTTTAAATCTGTGTGTTTGTTTGTGTTCATGTGT
GTCCACAGTTATTTGAATATTGTTAAGTGACAGGATGTGAGGTGAAAGAT
GGTAAAATCGGAGATTGGTAAGATGAGAAAGTCAGATTGGCCCGGGTGCA
AAGTTGCATTGGCAGGAAAATGCATAGACTTTGGGAAGAATTCACAATAA
TGGACATAACAAATTCACAAAAACTGTGAATATTTCACGGAGGTATGAGG
TCTGCAATTTCTTGTTTCTATGTTGTATAAATTCTAAAAAGCTTTGATAT
GGAAATTGGGTGAAAAATATGTCCTAAGCAGGTCAATATCTCAAACTCAA
AGCTATTCTGATTTTCCTTGTTATAACTCACAGTCAGATCATGTCAATGA
CATTCTTATTGATTCATTGTTTTATCTCATTGCAACCAGTGAGACTGAAC
ATTGACCTTAAACCACTGCTTAAGGAAATTGTGTTATTGTCAGACCAACT
TACTCTGAGTCTGATTATACTTGGATCATAAACAAATAAATCCCTCTGTT
TGTATGTTTAGGTGAACAGCTAGGTATAAGGATAGCGGGCCTGCAAGGTT
CCACAGGAGTGTGTGTACGAGACCTGGTGGAGGGGGGATTAGCCGCCACA
GACGGGAGGCTCAGACCCAGTGATGTCATCCTGGAGATCAACGGACAGGA
CATGAGGCAGGCCACGTCTGAACAGGCTGCTGAACTCATACAGGTACTAG
TAGTAGTACCGTACATGTCATGTGTGATATCTTCATAGTTGAGTAGAACA
TGTTTCTCGACTGATGTTAACAGTTTGTAGCCTAGGATTTTTATGAATCC
CAAAGGCCACACCATTTTAATTTCTCGGTTAACGGAATTTTAAAAAAAAT
GCTAGATTGGAAAATCAACAGGAAAACAGAATCTCAGAGGAAAGTTTGTA
CTTTGGTGCACACAATTTCAGGGAGTGAACAGGGCCAGGTGCAATTTTCA
CCCCAGCCTTCTGTTTTCATGATTTTTTTTGGGCTAGAATTTTTAAAAAA
AGCCATTAACCAAGAAATTAAACTAATGTAGCCAAAGGGTACCCAGTGGG
TCCATCGTCCATTGTTATTTGATAAGTCAGCAAAAAGAATGAGCCAGCTG
CAGAGGATGGTACCTAGGCTAAATAGTTGGCTGACAGCCTCTGTAACTTA
AAATCAGGGTGGTGCAAGTGCGTTCTGTAGTACTAGTAGAGCATTATGGA
GCACCCAATGATTTGGCATGAAGCTTTGAGTTACAGACTGTTATCTGGAT
TGCTGAAATTGGCAGAAAAAGATAAATGCATATGTTTAAAAGACACAGCT
TAGTGTACAGAAGCTATGACTCTCCTGCAATTTTATCTCAAATGAAGGTC
ACAGAAGGTGATATTGCAAAGAATCGCAGTATTTGCTGTAATGAATGCCT
GTTTCTGTTTCAGTCCTGTGTAGAGAAGGTAGACTTTGTTGTATCCAGAC
CAAGAAGACCTCAGCCCCCAGACCTCATCAAGGGCATGTTAGAAGCGGAC
ACCTCTGCTAAAGCGCCAGACGACGCCAGTCCCCCCTCCTTCCAGGACAA
ACTCATCAGCATCAGAAAGACTGCCCGAGAGTCCCTGGGGATCAGCGTGG
CAGGGGGAAGGGCCGGCACCAGGGGAGACGTTCCTGTGTTTGTAACTAAC
GTCCAACCTGACGGGTGTTTGGGGGGAAACGGTCAGCTGAAGAAAGGTAA
GCAGATTTCAGCTTTTTTTGTCATTTACACTGTTGCTCATGTGTTGTTTT
CACATTAGGGTATTACTATTAGACCACTACAGGTGGTATCTTGTTGGATT
AAAATTTTAAATAAAAATTTTACCATGTCAACTGTACAGTGTAAGCCTAT
GTCTCTTTTTCCATACATTCAAAAAGAGATGAATACACTTTTCTTCAATA
AAATAACCCTAAGTCTTTTCTTATCTTTTTGAATTAAATTATTGTCTAGT
TGGTTTTCTTTGTATTTGCTTAGCAATGTAAGCAAGCTACTTTTATTATG
TGTGAGTCTTTGTGATGTTATGCCCTTGTCTTGTTCTTGACATTGTGGGT
GTATGTTAGTGGATTTCTGATCTAGTAGAAGTAGTAATGGTAATCTAATG
CCCTTGTCTTGTAGGGGATATCCATGTGAGTGTGTGTAAGTCTCTGTTGT
AATGCCCTTATGTTGTAGGGAAGATCCTCATGAGTGTGCTAGTCTTTGTG
ACGTACATATAATGCCCTTGTCTTGCAGGGGACATCCTTGTGAGTATAAA
CGGCACGACCCTGGTGGGCCTGACCCACGAGGAGGCGGTGGGGGTCCTCA
GGGCGTCGGCTCTGTCCCAGTGCATCCTGCTGCGGGCCATGGCGCCTGCC
AGAGATGGGGACAGCGATGAGGAGGAGGAGGATGACTTCGATGAGGAGGA
TCCTACCACGGGCAAGACTCCATCATGGATCATGTGGATGAGACTTCCAG
AGTAAGTGGTGTTAGCAGTGTAAGAGTACATGTAAGTGGTGTTAGCAGTG
TAAGAGTATGTGGTGTTAGCAGTGTTGGCTGCAGTACCCTTTATAGTTGC
CAGGAGTTTGATTGTGAGTAAAGGAGGTAAATCAGCACGTCGCCGGAACG
TAAGCCTTGTGTTTAAGGTCATGTTCACGTATTTAAGGTTAATATCTCGC
ATTTAGGTTCATTTAGTTGTGTACAAAGACATATCTTATGCAACGGCTGT
TACTCCGATGCGAAGTTGACCAAAGAGAACATAAGAGATTCTGCAGTTAT
AATAGGTTTGAATAGCAGGCTAATTGCCGTATACCCATTACATTCCGGGG
ACGATAGATTTTGAAAATACTGTTGCTTGCATACTTTCATCTTAGGCCAC
ATCAATTTAATTTCTTGGTTAACGGATTTTTATTTTCCAAAAAAAAATTT
TAGAAATTGGTGTGGCCTTACGTATCTTTTTACCTTGATGTCTAACCTTC
ATTGAGGTAACAAGTACGATTCGGTCAAAGCATGAAGGCCTTGTGTAGGG
TTAAATTGTGTGGAATGCAATCCAATACTTCTTCATGAATGTCTTATCCT
TCAACCTGCTAAGGTAGCTATTTGGCATCAAATTTGTGTTGGATATGGGG
TTAGGCAACAGGGGCAAGGTTACATTGATTGGAAAGTTAGTCTGAGTCAA
CAATAAGTGTTTATTCAATGATGAAGCCACTATTCAAATTGCTGTTGATA
AGAAATTGACATTTTCCATGTTTTATAGGATTTGTAGTGACGTCGGCATG
GCGTAATGGTTAGAGCGTTGAACTCGGAATCAAAGGGTCCCGAGCTCGAT
ACTCACCATGCCCCGATGTTGTGTCCTTGGGAAAGGCACTTCACACTACC
TTTCCGGATGGTGGAGTGATGCCCACCAAGCCTATTCGGCTAATCTGTCA
AACTGTGTGCCAAGAAACACACTGCGGAGTTGGTTGCCGATGTGCCAACA
TCTAGCGCATTTGCCACTAAGAACCGTTTATTATTTTATATTTCTTGTAG
GATTTGTCAAGTTCCCAAGTCAGTGCAGCTGGAGAGGGGCCAGTCGGGCA
GCCTGGGGTTCAGCATCGTGGGTGGGTGTGACGGCATCCATGGGAAACAG
CCCATCCTGGTCAAGTCCATTGTGCCTGGGGGGTCAGCCGACAGAGACGG
GAGACTCAGGTCAGTTGGGAGCATCTGTCATACATGTATGTCCTACCAGT
TTACCTGGTATAATACTTGGCATGATCAAAGCTTTGAAAGAGGTCATCAG
AATGTCTTGTTGTTTTCAATTTGTTATAATTCAATTGGATACAATAGGTT
TTTCTGACAGTAGTTTGCACACCTTCTCTTTCCTTGTGAAGCTTGTAGAG
AGTAGTGCATTAGTGAATGAGTTGAACCCTGTTCATTGCTTCTAGTACCA
CTGCCTATATGGTGTAGGTTTAATAACAAAAGCAAGCGCACCTAGGATGA
TGTCAGATACTGTAATTCATGATTTGTTAACTGTAACTTAAATTTAGCTA
ATTTAACGGTCACTTGTCAACCGCTAAAATTTCATCATCGCTAATATTTG
ATCACTATTTTTTGAGACAGTGATGTTAGTTCCCGCCGTTAAGATTAAGT
GCAGTGACCTACTCCATTTCCCCCCAACCGCTATATTTTCCTGCCGTTAT
ATTAAAGTGATTTACAGTAATGTTGGCAAAATTACCTCAAGTTGATCAGT
AGATGTTACTATCTCTTATTCTATGTATTCATTAGTTAGAAACAACTTAA
TGTTTGCCTTCTAGTTGTAATGGAAAAAAAAAGTTGTGTCTCAACTGTTG
ATATTTGATTACATAGGTGTGGAGACCTGATCCTGTCTGCCAACGGCCAC
CTGATGACGTCCATCTCACACACCATGTCAGTCACCCTGCTGAAGAGGCT
ACAGGGGAGCGTCATGCTGGCGGTGGTGTCCTGGCCTGGAACTATGCTGT
AACAATAGCTGTGGTGTCCTGGCCTGGAACTATGCTGTAACAATAGCTGT
GGTGTCCTGGCCTGGCACCATGCTTTAACAAACTCTGGCTGTAGATGCAT
TTAATTTCACTGTGGTTTTATGTTCGCTGCATTTGCGGTGGTGACCTCTT
CAATACATACTTAAAACTCCTGCGAAAATGCTTGTTCTGTCTTCTTCTCG
CCTACCCCATTTTTGAACTGTGAACTTAAAACCACTACAAACATTCTATT
TTATTCCTATTACAAAATGGAATCACTGTGAACTTAAATGCATTAACACT
ACACTTCTGTCTTAGGTGACCTCTCACCCAAGAATGCAAATGACAAATCA
CTTTTCAAACCCAATCTGTGAATATTCTTGATGCTGGCTGTGGTCTCCTG
GCCTGGGACTATGCTGTAAAAACAAACTACTGTAAATTCATTTAAGTCCA
CGTTGGATTTATGTTTGGGGTCCTCTCTATGACCTATTCACCAGGTACTT
AAAACCGCTGTTTTCGCTCTTACCTCTTCACCATATACATAAATCTTGTT
CTGTCTTCTGCCCACTTACCCCATTGTGATGGTTTGAAACCCAAACTTGA
AACCATTGTGAACACTTTATTTTCTCCCGCAAAATTAAATCACTGCGAAC
TTAAATGCATGGGTGATGTCTCGCCTGAGCATGCAAATGACAAATCACTT
TTGTAATCCAATCTGTGAATATTCTTGATTCTATGCTAATATTGTCACAG
AAATTTTACCTGACTAAATGATAGACTCTAGATTTACCAGTAAGGCCACA
GCAAGTAAATTTTATGGATGACATCCTCCGCAGACTCCAAAATTAATGAG
ATAGGGCAAAAAAAAAACAAGGCGGGCCAAAAAAAACAAGATTCCTATAT
TTTCAAATTTTGAGATCATAATTCTTGTTAAACAAGAATTGAGGCGACGA
AATATGATATCATGACCAACAGGTCTTTAGTCCTGTATTCATTCATATAT
AATATAAAACCTCCTTGATTCAGCAGTAAACATGTCCATGTAGATGTGTA
TACATCTCAATAGACTAACTACAACAAATGCAGAAAAGAACTTGTTGTTA
CTATCATCCAAAGCAACTACACTGGCTTTTCATATGCGATGAAACACCTT
GTGTATAGAGTTCAATTAACTAGACCCCCCCCCCCCCNCTTCCATTGCAT
TTAGAGACTAGATATGTCATCATACATAGATATCAGAGGTAGAATAAGCT
GGCATGTGCCTTTTGGAAAAGGCTCTTCCATGCTCAAAGGGTCTAACTAA
CTGTAGTATGCTCTGTACTTTCAAAATCAACACTTTAAAATGACCAGGAA
TAGAGTATCTTTGTAATGTGTTAGTTGTGAAATAGGACCACCCTTTTTTT
CTTTCTCTCACCATTCTGTTCCCTTCACCTGTTGCACTTGTAATTTTAGC
AGAATACTAATGAAATACTAGTCTTGCGTATCATTATGTTGATAAACTGT
GGAGTCATATCAGCTTAAAGGTCCACTTAGCCTTACACAACTTGCCATGT
GTGTATCATAGGTATGAGATATTATATAATGGTATATTACTTAACTATTT
ATTACAGCCATACAAGTATATCTATGCTATATTTGATATTGATTGTGAAA
CCTCCAATGCAAGAGCTGGTTGGCTGATACTTGGTCACATGCTTCGGTAA
AGCAATAAATGCTTTCCTGTACAATTGACATGTGTGTCCT Coding sequence (CDS) from alignment at Sc0000068:179898..186337+ >transcript:BL96749_cuf7 ID=transcript:BL96749_cuf7|Name=transcript:BL96749_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=1155bp|location=Sequence derived from alignment at Sc0000068:179898..186337+ (Branchiostoma lanceolatum)
CAGGTGAATGGGGAGGACCTGCGTGAGCTGACCCACCACCAGGCCTGCAG
GGTGCTGAGGAAGCCCTGTCCCCTGATCAGACTCACCATCCTGAGGGAGA
GGGTAGCCGAGGAGAGGACCACGGGGGCTGAAGTGCAGGAGACAATCAGG
GTGGAGCTCACGAAAACTTCAGGTGAACAGCTAGGTATAAGGATAGCGGG
CCTGCAAGGTTCCACAGGAGTGTGTGTACGAGACCTGGTGGAGGGGGGAT
TAGCCGCCACAGACGGGAGGCTCAGACCCAGTGATGTCATCCTGGAGATC
AACGGACAGGACATGAGGCAGGCCACGTCTGAACAGGCTGCTGAACTCAT
ACAGTCCTGTGTAGAGAAGGTAGACTTTGTTGTATCCAGACCAAGAAGAC
CTCAGCCCCCAGACCTCATCAAGGGCATGTTAGAAGCGGACACCTCTGCT
AAAGCGCCAGACGACGCCAGTCCCCCCTCCTTCCAGGACAAACTCATCAG
CATCAGAAAGACTGCCCGAGAGTCCCTGGGGATCAGCGTGGCAGGGGGAA
GGGCCGGCACCAGGGGAGACGTTCCTGTGTTTGTAACTAACGTCCAACCT
GACGGGTGTTTGGGGGGAAACGGTCAGCTGAAGAAAGGGGACATCCTTGT
GAGTATAAACGGCACGACCCTGGTGGGCCTGACCCACGAGGAGGCGGTGG
GGGTCCTCAGGGCGTCGGCTCTGTCCCAGTGCATCCTGCTGCGGGCCATG
GCGCCTGCCAGAGATGGGGACAGCGATGAGGAGGAGGAGGATGACTTCGA
TGAGGAGGATCCTACCACGGGCAAGACTCCATCATGGATCATGTGGATGA
GACTTCCAGAGATTTGTCAAGTTCCCAAGTCAGTGCAGCTGGAGAGGGGC
CAGTCGGGCAGCCTGGGGTTCAGCATCGTGGGTGGGTGTGACGGCATCCA
TGGGAAACAGCCCATCCTGGTCAAGTCCATTGTGCCTGGGGGGTCAGCCG
ACAGAGACGGGAGACTCAGGTGTGGAGACCTGATCCTGTCTGCCAACGGC
CACCTGATGACGTCCATCTCACACACCATGTCAGTCACCCTGCTGAAGAG
GCTACAGGGGAGCGTCATGCTGGCGGTGGTGTCCTGGCCTGGAACTATGC
TGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000068 | genome | Sc0000068:179898..186337 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96749_cuf7 |
| Biotype | protein_coding |
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