transcript:BL96760_cuf2 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96760_cuf2
Unique Nametranscript:BL96760_cuf2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96760_cuf2

>transcript:BL96760_cuf2-protein ID=transcript:BL96760_cuf2-protein|Name=transcript:BL96760_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=1296bp
ICGVVISYPSGISASIKAQAGLLTFVLGLGADMRSNLQGLLGNLNGDPND
DFILPNGSYVHAATPDEPTEKELYYNFGKMWSIRSVCLCDHTNVNNATLF
HNYPTDPSNNSPENYGDDNFVPKFFDDDDLFPNEETRKMAVAACGADNRE
CIYDIALTSQVDIGLTTTQSETEYRTSNEILRNNAPEVFAPTEIRAVVNK
TYTTKVRGMDACPYVNIAVTGAGKLTKTGNYSADFSWTPTSEQFVAIEFT
VSDDMGASTITVPDVTVCACQNGGICDFDGVTDRVEGFALAVCICPTGFI
GTTCQTDVDACEGNPCFQGVECTDQPAPLAPGQPGYICGACPFDMVGNGE
TCADLNECLLDPSDRRVHQCVNADCENTPGSYSCVCHDGFAKEGDSHTCT
DIDECRSLNTNDCDPLHGICNNTVGSYTCSCQAGCYTNDNGRTCLDINEC
MTQNGGCERLCTNTKGSYSCECGVAYVLAEDGHTCEELDECAAEHVCEQI
CVDKVGYYDCECDELFTLNLDGRTCDPIINCSTNNPCTPPPIGHCAMNLT
DSGDLEEQCVCAAGYQILPNNTCADINECNNGHKCDEHGDCVNTEGSYEC
SCHPGYKLDKDHGKRHCQNIDECAIDNGNCTHLCVDTPGSFYCTCPLGMV
LDKDMCTCVDIDECAENLAECSVNARCNNTSPGYDCICDAGYTGDGIKCG
DINECLYQDTHDVRCKVGCQNTLGSFVCICSVGWQRDNDSISCTDMDECL
LGTDGCDHNCQNAPGSYTCSCREGYLLRPDGHTCRPNLSSVRTTAQPVTL
PPLPPRPSEHPSTTTTQTTKTSRPETVTLPPRTVSSEKPSTTITQTTQTS
RRETVTLPPRTVSSEKPSVRTTTQTSSMRTEASSLPPSTTLMAACQGGCG
TGGRCEIVNGSSTCVCDEGFQLTNGTCVGAVIPVKTKVLLPAVALSVGIP
LLCLVCACLAAYRRRKKQVKYYTVDGGSTNSGGRWIWLPKREGSSSSGYF
TWTQNTPNSGSIDSLFNSNVFPWTYSTPNQSSKNSDMNSNSFPWTYSTPN
QSANNSDMNSNDFPWTYSKPKPKDFPWTFWKTNTDSGNSDSKSNDFPWTY
SKPNQSSTSSDGKTNDFPWTYSKPNSSSENSDRSSNDSPRTFSKPNCNST
SSDSQELELPGLNRYLPYPNSYRSLRSLSSGSMSRRSLSIRLTGTLSNMS
SMASLGSSYRRNKSPGSPACEPIACPKEEDPEALKEHDTIFGSDTKFCIQ
RPRFIDPSAFKEKNDDPPQSEELKGDKDDDEEEEEEETKQACFNLL
Run BLAST on NCBI

mRNA from alignment at Sc0000053:98867..112401+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96760_cuf2 ID=transcript:BL96760_cuf2|Name=transcript:BL96760_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=13535bp|location=Sequence derived from alignment at Sc0000053:98867..112401+ (Branchiostoma lanceolatum)
ATCTGCGGCGTGGTGATCAGCTACCCATCGGGCATTTCGGCCTCCATCAA GGCCCAGGCTGGTCTTCTGACCTTTGTCCTTGGCCTTGGAGCGGACATGC GCAGTAATCTTCAAGGCCTCCTAGGTAACCTCAACGGCGACCCGAATGAC GATTTCATCTTGCCAAACGGATCATACGTTCACGCGGCAACACCTGATGA GCCAACGGAAAAGGAACTGTATTACAACTTTGGCAAGATGTGTAAGTATA TAGCAAAGATATGTTGAGTTTCTGACTACAGTCAAACCTGGTCCGGCAAC CACCTGGCACAGGCAAACACCTCCGGTCACAAGCCACATTAAAACAGTCC TGTCCATTTTACATAGTAAATCCTACACTGTCCTCAGCAACCACGTTTCC TTCACCCTTTTGAGTGGTCGCTAAATCCAGGGTTGACTGTATTTTTGTTA ATTTCTTTCGTGTCTTTCGTTCCAATTCAATATGCTAGAATATAAAGATG AACAACTTTAAATCTGAATATATTATGTTTACTCAAAGGGTCTATTCGGA GTGTGTGCCTTTGCGACCACACCAACGTTAACAACGCCACACTTTTCCAC AACTACCCGACGGATCCGTCTAACAACTCGCCGGAAAACTACGGAGATGA CAACTTTGTGCCGAAGTTTTTCGACGACGACGATCTCTTTCCCAACGAAG AGACGAGGAAGATGGCAGTAGCCGCTTGTGGAGCAGACAACAGGTATGTC GTTGTTGTTATGTTGTGGTAAGATTCCCTCGACTATAAAATGAAATTGAA TTTGTGTTGTATGATATATTGCTATATATACTTACTTAGACTCATCTTGC TATTTGAACAATGGGACCGTGTAATTACACGAAAACGGAATAATTACGTA AAGGCTAGATATGTCTTTCACTCACCCTTACGAAATCTTAAAGTCTACTG AAATACTTCAATCTCCACCTTTTATAATTCTTAAGTAATACGTATTTTGC AAGCCTGGCTTAAATATCTGTTTTAGTGCTGTGAGTGTGAGTATTCTAAA AGTGAGACCTAACCATCCATCTATATAACTATGATGTGGCTCATATGCTG TTATTGATTATATTTTGTAGTTCTAAATGTAGGATAGATTAGCCTTTGTA GTATTGCTGTTCAATTCATGTAACTGTTAACATATTTTGTACCATGTTTG ATTGTCGAGCAATAAAGTTCATGCNCAATTGTCGACCAGTATAGTTCATT TATGCATTCATTCTATTGTTTCACCAGGGAGTGTATCTACGACATTGCCC TGACGAGCCAGGTCGACATCGGCCTCACCACCACGCAGTCGGAGACGGAG TATAGAACATCTAACGAGATCTTACGGAACAACGCGCCGGAAGTCTTTGC ACCAACGGAGATCCGCGCTGTCGTCAACAAAACATACACCACTAAAGTAC GCGGCATGGATGCGTGTCCGTAAGTACTTAAATCATATCGTTGATGATGA TGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATG ATGATGATGATGATGATGATGATGATGGTGGTGATGATGGTGATGGTGAT GATGTTAATGGTGATGGTGATGATGATGACGACGAGGATGAGGAGGATGT TGTTGTTGTTGATGATAATGATGAGGATGTTGATCATGATAATGATGACG ATGATGATGATCATAACCCACAAAGAGCAAGAACTCATGATTCATAAAGC AAATTTGAAAAAAGGGCGTAGAATATGATAGAGGACTGCCATTACTGCAA TGATACTCGAGGGCCTTACTTAGATGCTTGGTTCATCTTTACAGATATGT TAACATTGCCGTGACGGGGGCTGGGAAGTTGACTAAAACCGGAAACTACA GCGCCGACTTCAGCTGGACGCCTACGAGCGAGCAGTTTGTAGCCATTGAG TTCACCGTGAGCGACGACATGGGGGCCTCGACCATCACTGTCCCCGATGT CACCGTCTGCGCATGTCAAAATGGCGGCATCTGCGATTTCGACGGCGTCA CCGACAGAGTCGAGGGATTCGCGCTCGCTGTTTGTATCTGCCCGACTGGT TTCATCGGGACGACGTGCCAGACAGACGTGGACGCCTGCGAGGGGAACCC TTGCTTTCAAGGTATGTATTGCAGTTGGAAAGATATATTGTTATAATTTC AGAACCGTCGACTTTGAGGAATAAGCCTGTGCATGGTTCCCACTGCGCAT TCGTGGTGAGATGCAATGTGGGTAATACACGAAAGGTGAAGGTCCCTAAC TTGTTCTTGTCTAGACCATGATTAGAAAAACATGTCCAGGGGGGTCTTTT TATGTCTAAGGGGATTCAACTTTGACATTGCTATTTAGCTCATTCCTGGC GTTCACTATTGACTATAAGTAGCTCTGTCACTTTGATACATTGATTAATG GTAGGCTTTATATAGAAATCTAGTAAAGTTACTTTCCAGGTGTTTCCTCT TAATCATTCCTACTTCTCGCACTACAGGAGTGGAGTGCACCGACCAACCT GCACCCCTTGCCCCGGGACAGCCCGGCTACATCTGTGGAGCCTGTCCTTT CGACATGGTGGGGAACGGAGAGACATGTGCAGGTAGGACAATCAGTCAGT CAATCAATCAATCAATCAATCAATCAATCAGTAACAGATTTCGACCATGG TTCCTATGTCATATGGATTGAGCACTCGGTTAAAGGCGAAGGTTTGGATA TTTATAAAAGGATGACAGGATGTTGCTGTCAATACGAATTTTCGACGCTA CTAACGGGATGTTCCTGTCGTTTTTTTCACTATTATATTCCTGACAGTCA ATAAGAATTTAGTTTTTGGCATTATTTACAGGTTCCTGATGTTATTTCTA TGTACCTACAAGAAAATACAAGGAGAAATTGTTTTGCAATTATTGCATTA AGTAGCTTTATACATTACCGGTAGATACATTGATGTTTTGAATCATTGTT ACTTTTGGCAGATTTGAACGAGTGTCTCCTTGATCCTTCGGACCGACGTG TTCACCAATGTGTGAACGCCGACTGTGAGAACACGCCCGGTAGTTACTCC TGCGTGTGTCACGACGGCTTCGCCAAGGAAGGGGACTCACACACTTGCAC CGGTAAGAAGTGTACAATTATGCCAAACGAGTGTGAGCTGAATATGTAGC AGAACGATTTCCTAACGCTCTTTGTGTTAGTACAGTGGCCAATGATACAA TGCAAATATTTGGATTTTATTTTTGCATGACCGAAAAAGATCAGATTCAT CATGAATTTGAAAGTCTGGGTCTAACGTTACATCATAAACGTTTCTTTGG TAATTTTGACAAAAATCTTTTGAATGGCTATGTCTCAGTTAAGGCTATGT CTCAGTTAATTCTAACAAACACCTTTTGAATGGCTATGTCTCAGTTAAAG TAATGTACATGTCTTTTTTTTTCCTGTAGACATAGATGAGTGCCGCAGCT TGAACACCAACGACTGCGACCCGCTGCACGGGATCTGTAACAACACCGTG GGATCCTACACCTGCTCCTGCCAGGCCGGTTGCTACACCAACGACAACGG AAGAACTTGTCTAGGTAAGATGTTAGTTCACGTTGTGACTCTTTCCCTGA CAGAGACAACTTGCAAACGTAAAACAGATCACTCACATACTAGCAGGAAA GCTTATTAGCATGATGCCACAATAGCATGTGGCATCGTGTGGCGCAATCG GTAGGGTGTTTCGCCCATAATCGAGAGGTCCCGGGTTTGAAACCATTGCT ATGCCACGATGTTGTGCCCTCGAGGTGTGCTTATTGCTTGTGTCAAGCGA AAGTATCAAATTTTATCATGAAATCCCTCACCCTCTTATTGACTACATCA GTATGATACAACCATGCCCATTTCACCAAAAACGTGCACGTTTTGGCTCT CAACTAAACCATAATTGCACGTGATTCAAACCGCCTCTTGTCACTCTACA ATATTCAAATAACTGCGGACACATACCACCACAAACAAGCACACCAACTC AGTACAAGATTTGAGAATGCATAGACTTTCAAACTATTTGTATTGAATAC TTTCAGATATAAACGAGTGCATGACCCAGAATGGTGGTTGTGAGCGGCTG TGCACCAACACCAAGGGAAGCTACAGCTGTGAATGCGGGGTCGCCTACGT GCTGGCAGAAGACGGACACACGTGTGAAGGTATACCCAATCGACGCTATG TCACAATTACGCTCTTCTGAATAATCTACCATTGGTCAGTGCTTTTGTTT TCTCTGTTTCCGTGAAGTGTAGAGGGATTCTTAGCGTCCAAATTCTGGCA CAACATTGCAGAATGATGTAGTTTCGTGTTTTATTTGCTTCCCATAGCTC TTGCACCGCGAGTGAATAATAGATGGTACACCTTCGCCAAGAAGGCTATG TTTTGTAGCTTTTGCATATGTGTATGTGTGTTTGCATGTTTTAACTCTAG AAGGCCTGGATGGATTGTAATGATATTTGATATGTGAGTAAGTCATTTTT AGACCTTGAGACGATTAGATTTTGGAGCCCCAGGCGTGCTGTTAACGTAC TGCAGTGTAGCTTTCGGTTTTGATATCTCGAGTTCTGGACATGCTATGGT CATAAGTTTTGAGTGGTAGATAGATCTTGTTGTTGCTGCTTTTTACCGTA ACTTAAGCTATGTCTGAACAGCCTACCGCTAGAAACATGTACGGCTCCGA ATCTGACTTCCTTTAAGAGACTCTTGAAGTAACGGAAATGAACAAAAAGA ACGGACACGGACCGTGAAGCAGCTCTAGCCCTACTATATGTTGTTAGTTG TAGCAATTGTATATTGTTGTACCATAAATATGTAATGATATATGTTGATA GAGTTATTAGGACTCAAATGACTGTGTGTCTCTGCTATATTGTATCTGAC CCTTACCTCTTCCCTCATGACCTCAATGAAAAGAGGCCTGCGTGCCGATT TGAGCTTATCATGAATAAACAAAGCTTCAAACAAACAAATGCAAATCTGT GATCATCTCAATGATGTTACAGAGCTGGATGAGTGTGCGGCGGAGCATGT TTGCGAGCAGATCTGTGTGGACAAAGTGGGGTACTACGACTGTGAATGTG ACGAACTCTTCACCTTGAACCTGGATGGACGCACGTGTGATCGTAAGTTT TTCTATCTTTCACCTTAGTTGCACATTTAACGTTGTCGAGCATTAGCTAT ATATATTCCAGGTGCCATCTTTATTTACCGTCATCATGTTTCCCGATCCC GCATGTTTCTCTCATCACTTAGTCTAATTATTTGACTGTTAGTGCAGCAC AGAATATCTGGCAACCAGTTTGGTACCCTTCTCGGTTTTCGTTTTTACTT CTTGTTTCACTTAGCGCTATGCCTGTCCATTTTATGATATGATCTTTCCA TCTTCTTTTAGGGTGTTTTGGGCTGTCATTGTTCCCAATCTCTCCTATCT GCTGCAAACCGTTGTGCCTCTTCCCACCCACTACCCATCACTCGTCAGAC CTTTTTTCGCTTATCGCTTGACCACCTCTCTATTTTTGTAGCTGGGTTCC AGACATTTAGTAATGCCCGTTCTAATAGTTATCAATGTAAGTTAAGTTAC TGTAGCTAGATCTTTTTAAAAAACATGAAGAGAAAAGAAATCACGTGACT AAAATGACTAAAAAGTTGTTGTCTGTTTTCTGTAGCCATCATCAACTGCT CAACCAACAACCCCTGCACTCCACCTCCCATCGGCCATTGCGCGATGAAC CTCACGGACTCGGGTGACCTTGAAGAGCAGTGTGTCTGTGCCGCCGGGTA CCAGATCCTGCCAAACAACACGTGCGCAGGTATGTAGTGATTTAACCAGA GCTTGTCGATTGGACAAATATTCTTTCAATGGGAGCCTTTTTCAAGTTAG AAGAACGTTCAACCCCTTCCTGAAAAATACCATGATACTGAAACAGCAAG GAAACCTGCTGCCCTATGTGCCACTAGGCACTACAGGGGTCTGAACGAAT GAACGATGCTTTAAGAGTTGTTCTTAGGTGTGAAGTATGTGGAGAAAAGT ACTTTATATCAATGAAAAAGAAGAGAAGAAGAACGCGTCGTCTGACGACT ACGTTTACTTACAAAATCAATGATGACTGTTCCAAGATCTTTTTAAGCCA GACCGTAAAGATCTAGATAGGAATTACCTACTACATACCTCCAGGTCGTT GGGGGAACAAGGTAGAAATGATGTCAATTACGAAGGCTAAAACCAGATGA ACTTCAGACTACTTTGTTTTGAAAATAACGTTTTGAGGACAACTTGTGTC ATTCTGCAGACATCAACGAATGCAACAACGGGCACAAGTGCGACGAGCAC GGAGACTGCGTCAACACCGAGGGAAGCTACGAGTGCTCCTGTCATCCGGG GTACAAGCTCGACAAGGATCATGGGAAACGGCATTGTCAAAGTATGTTTA GTTGTTTGTTTTTTTGCAGAAGCGTCATACTGGTTCCATGTATTAGTACA TTAGGTCATTTTCTGCTAACTTTATAAAATTTAGATATCGTACTGCTTTT CTGTTTTCAATAACCACGTAATCGTGATTTAAACTATTCTGATTGAAAGA AATTGTAAATTGCTGTTGCTGGTAGCATTTCTCTCGTTTATATGATTATA AAGACGATTATGATATAAAACTGCGATTACGTAATACGATTTCAAAGGCA AAGAGAACGTAGTAGACAACCTCAAGTCAACCGTACACACTTACGCGATT ATGATACGATTTCAAAGATAACTATGTCAACATTACTACTAACTTAAAGG TATGTACTATCTAAATTTAGCTATTTTTATTCTAATCCATATTACTTGCA ACAATAATCTTATATTACTGTTTTACTCTTCAGATATCGACGAGTGTGCC ATTGACAACGGCAACTGTACCCACCTCTGCGTGGACACCCCCGGATCCTT CTACTGCACATGTCCACTGGGCATGGTCCTGGACAAGGACATGTGTACTT GCGTTGGTAAATATCAATAACACTACGGCGATAGTTGTCGACTTTTACCT TTGGCAAGAAGATTATGTTTTTGGTGCAATTTCTGTGTGTTTGTGTGTTG AGAACCTGTGGATGGATCTTTATGACATTTCGTAAGTGGATAGGAAAACC ATAGTTGTGTTTTAAACCTTGTTCGTTCGTGCATGGCCTCTCACTGATTA GAGATGCAAGGCAATAGTTTTATCCAACGCAGTTTAATTCTTCTAAAAAC AGACCAGATTCAGTCTTCTTGAAAGAACGAATTTACTTTGTGACTATAAT TATTACTTTGTGACCTTGATCCTGAATTCATCTATAGCAACAGAAAACCA TTCACAAATGAACTTTATGCTCATATTACTTTTAGCTGACCAATACTAAC ATTACCACTGTAACACAGTCATAAAAACATAAACATAAGTACACAACCGT AAGCTGTATATCGGATGTATTAGTTGTGTGCTGACCGTCTAATACTATAT GCCGACTTTTTCAGACATCGACGAATGTGCCGAAAACCTTGCCGAGTGTT CTGTGAACGCCCGCTGTAACAACACGAGCCCAGGGTACGACTGCATCTGC GATGCGGGCTACACTGGAGATGGCATCAAGTGTGGAGGTAAGGCATAGTG ATATTCCTTTGAAAACGTTTATATATACAGCTCTGTGTTTCAACTGTAGG TAGTGGGTTTTTCCTGAAACGACTGACCGTTTCCAAAATCTATCATGTTG CTTGAGTTACTGATATCTTGCGCATTTTATTGCCTGGATGTCTAATATTC ATCGACGTGTGTATCAATGCCATAACGCAAATGCAATGCTGCCATCATTT AACATCCGTTTGAATTTCCTCCAGATATCAACGAGTGTCTCTACCAGGAC ACTCATGATGTGCGGTGCAAGGTCGGCTGCCAGAACACTCTTGGTTCATT TGTTTGCATCTGTTCCGTTGGCTGGCAACGGGACAACGACAGCATTTCCT GTACAGGTATGGAACGCATTTCTTTCTTTTAAATCATCATCAAAAATCGT CAAATTGAAATCTGTTCTATAAACACGTAGGTTGAAACAAGGAAAAAAGG AAGGGAACTTGGTTGGCCCCAGTCATACAAAGCTGAGCACTGCAAATGTA TGGGTAGTTTAGTCGTGACCGTGAATAATTTAATCAGGTTAGTGAATGAC TGAAAAGGTCTGTTACTAGAATATTCTTCAAACAGTGACTTGATAAAAGG TAGCGAAATACTAACCTCCAAATTTTCGACGTCTAGTCTGTACGTCTTGA TCACGGAGTGACCTAGTCTCGCGAGAACACGAGACTAGGCCGAGACTTGT GAAGATCGTCCTGCCTGAAAAGGTCTTTATTCACAGCCACATATTCAACA ATATCCTACGTTTTGATGACCGCCTGTCATCTTCTTCAGGGCAATTCCTA CTGGTGTTGGGTGTCACTCCTAACATCATCTATGTACATGACAATGATTT ACATTTGGGGCCGCATTGTTAGCAGTGACACCGAGCTGCAGTGCAAAATG AATCAGTCAGAATTACCCTGAAGAAGATGGCAGACGGTCACCAAAACGTC GGTCTTGAATGAAATACTTGGTTGTAGACGAATAACTTTGTTTTCCAGTG ACTTACCAACCTGATGACACTGTCCACGGATGCAAAAAAATTAATGTAGT TTGTATATTCATGTATTTTCCACCTTTCACACCGATGCAGATATGGACGA GTGTCTGCTAGGTACGGACGGGTGCGATCACAACTGTCAAAACGCACCTG GCTCCTACACCTGTTCCTGTCGGGAGGGCTACCTGCTACGGCCGGACGGC CACACCTGTCGACCAAACCTTTGTAAGTGCATAACGAACATTTGTAAGCA ATATAAAGTCATATATCTCAATTGTAGGGGTGTCCCTGAAAGTAGTGGTC TGCGCTTCTGTTACTAGCCACATCTGGTTCAAATTACTTGGACCAGAAGG CCAGGTTTCAAGCCCCGGGTAGGACATCTCTGGACAAGAGGCACATTGAG TCATACCAAAGACTTTGTAAAAATGGTACATACTTCTGAAACAGTATAGA AGTTAAACACACTCCACTGCCAGTGGACTAGCCCCCTGCTGCAGTGATTG CACCACAGTGTGGCCCAGGGCTATGAAACGGAGATGGGTACCGCCCTATA CACCTTATGGTGTGGGAGGATTTTAACTTTTGAATAATATCTCAATTGTA GAGGTTCCAAACGTTGAGAGCGACATTGGCAGTATCATTCATGAAACGGT TTACTATATTAATGAGTAAATCATTATCCGTATCTCTTGTGCTATTTCAA CAAACTTGACACTAAGAGTTAGCAGTCAATAGAAATCATATCAAAATACC ACCAATTGACTTAATCTTTTACACTACAACCTGTCTTTTTTCCAGCTTCA GTAAGGACGACAGCACAGCCCGTGACATTACCACCATTACCACCAAGACC TAGCGAACATCCTAGTACAACAACAACGCAGACAACCAAGACAAGTCGAC CAGAGACCGTAACATTACCACCAAGAACTGTCAGTAGCGAAAAGCCTAGT ACAACAATAACGCAGACAACCCAGACAAGTCGACGAGAGACCGTAACATT ACCACCACGAACTGTCAGTAGCGAAAAGCCTGGTAAAACAACAACGCAGA CAGCCAAGACAAGTCGACAAGAGACCGTAACATTACCACCAAGAACTGTC AGTAGCGAAAAGCCTAGTGTGAGAACAACAACACAAACATCATCAATGAG AACTGAAGCGTCTTCTCTGCCTCCTTCCACAACCTTGATGGCAGCCTGCC AGGGAGGCTGTGGAACGGGAGGACGGTGTGAGATCGTAAACGGTTCTTCT ACATGTGTCTGTGACGAAGGCTTTCAACTGACCAACGGAACATGTGTCGG TGAGTGGGATTGCTTCCTTGTAGATGGATGGATAGATTGGTTGATTTGCT GATTCGCTGATAGAATGATTGATTGATTGATTGATTGATTGATGGGTGGA TGCATTTATTGATAGATCGATATGTTGACAGAATTATTGATTCTTCTACG AAATGCGGTAGTTCCAATGTCAAGGCGTGTGTATTACGTAGATGTGTCTG ACAGGCAAATGACATACTAAATGATGGTATGTCAATACTTGCTGTCTCGT AGTGCTGCTTCTGCTACTAGTATTGTGTTTCGTAGTTATCTACAGATAAG AACGAATCTTTATTCCCCTATTGTTGTTCATAATCATTGTCTATTAGTTT GTATGACATTTTCCCCTATTACACAACAATTACTAAACGTTATTCTTTGC AATTAATGTAGGGGCGGTCATTCCAGTCAAGACGAAGGTACTGCTGCCGG CAGTCGCCCTCTCCGTCGGCATCCCTCTGCTGTGCCTGGTTTGCGCCTGC CTCGCCGCTTACAGACGCAGGAAGAAGCAAGTCAAATATTACACAGTCGA CGGCGGCAGCACCAACAGCGGAGGGTACGTAAAATTTCAAATCTGCAATG ATATACAATAGAATAGACACATTTTATGACATATTTCGATATATTATGTA AACAACGTTGTAGCAAAAAAGTTGCATTACGTAACTTTTTGCATTCCTAC CGTCGAAATATACTAGAAACATTCATCTACGTCCACATCTATAGGGTATT AAGCAAGACCCCTCGTAGGGCACAAAGCTCAGGGAGTGAGGTTTTACCCT AGCATGACCGGTGGTGGTGCTTATAACGAAAATGGTGTATTCGTGTAAAT TCAATATAGGTATTACGACAAGTGTGGTAAGCGGTGGTTAGTTTACGTTT AAGTATCTTTTATAGAATAGATTATTTCCATGTGGCTGCAACGATGGCAA CATTTAACCAATGATGTAATCTCTCCTATCCGGTTACAACAGACGTTGGA TCTGGCTACCCAAACGTGAAGGCTCCTCTAGCAGCGGCTACTTCACTTGG ACTCAGAACACACCAAACAGCGGCTCCATCGACAGTCTCTTCAACAGCAA CGTCTTTCCCTGGACGTACAGCACACCCAACCAGAGCTCTAAAAACAGCG ATATGAATAGCAACAGCTTCCCATGGACGTATAGCACACCGAACCAGAGC GCTAACAACAGTGACATGAACAGTAACGATTTCCCCTGGACGTACAGCAA ACCGAAACCGAAAGATTTTCCTTGGACGTTCTGGAAAACAAACACCGATT CTGGAAACAGCGACAGCAAAAGCAACGACTTTCCATGGACGTACAGCAAA CCAAACCAAAGCTCTACCAGCAGCGACGGAAAAACCAACGACTTTCCATG GACTTACAGCAAACCTAACAGCAGCTCTGAAAACAGCGACAGGAGCAGCA ATGATTCTCCACGGACGTTCAGCAAACCAAACTGTAACTCAACCAGCAGC GACTCACAAGAACTTGAACTGCCGGGTTTGAACAGGTCTGTATGTTCAAA GATTACTATCATAATGCTTCCATTCACTTTGAGTGCTCTTCTATTAGTCA GCAATAATTGGCGTTTGAAAAAAGTTTAAGAAAGACTGACTGCAGCGGCA GAGTGTCCAGCACACTGCAAAACACAGTAGGCTAATGCAACTACCACAAA GGGTCTTTTAGAAATGATAATAAAATGAAATATCTGTTACCTTTGCCAAA GTTGCCAGAAGGTTATGTTTTATGCAGCGTATCAACCCCATACCTCGAGA AGGCCTTGGTATGTGGGTACGCATTGCTGAATGTGCCTTACTAATGCTAA AGTCACATTTCCAAACCGGTGCCCGACCGGGCTGTTGCGTGAACGATCCA TATCAAGAATATACACAAGTGATGTTCATGATTAATTTTTGCAACTTTTG TTTTGTTTTGTTTTGTCGTCTTGTGTATCATACTTCTCGTTCCCGCCAAC AGCCCGGCCTGGCCCCGGGTTGGCAATTTTAACCTTTAGCTTTCAATTTA CCCATTCCATACATCTCTCTATTCGTCCCTTGCAGGTATTTGCCGTATCC GAACTCGTACCGGAGCTTGCGCAGTCTGAGCAGCGGCAGCATGTCCCGGA GGTCCCTATCTATCCGGCTGACTGGTACCCTGAGTAACATGTCCAGCATG GCCAGTCTGGGAAGCTCCTACCGACGAAACAAGTCGCCCGGCTCTCCCGC GTGCGAACCCATCGCGTGTCCGAAGGAGGAAGATCCGGAGGCATTGAAAG AACATGACACCATCTTTGGATCGGACACAAAGGTAAACACATGATCTATC ACTCTTCGCTATCTACATTTCAAATTCAGGTGTGTTTTTTTTTCGATCGG ACACAAATGTGAAAACATTGTTTTTTAGAGTGCTTCACAGTTCACACGCT TCTTCAAGATGTAGAAACTCCACTATATATGTTTCTTTCCCATTTTCGTT AGAAACATCATCTGTAGGTTCTTTGTAACGTGTTGCCATCAAAATGAGGT TAAATCTACGTTTCAAATTCAGTGGGTTTTTTTTCCGATCGGACACAAAG ATGATGAATACATGATCTATCGCACTTTTTGATTACGATAAGGTTATATC TATTGAAAGTAAATCCTCTAGAGCTTTAGATATGGTAGATATATAAAAAC ATATTATGTTAAATCGGCTAATACAGCGTTTTATGGTAACGTTGGTTGAA ACTAATTTCCTTTTTTTTTTCTTTCTTATAGTTTTGTATCCAGCGACCAC GATTCATCGATCCCAGCGCGTTTAAAGAGAAGAATGACGACCCGCCTCAG AGCGAAGAACTGAAAGGCGACAAGGATGATGATGAGGAGGAGGAGGAGGA GGAAACAAAACAAGCTTGCTTCAATCTACTTTAGAAACAATTCCGAGCTA ACTGGATTGCAAGCACTGCGTAGTTAATGTACCAAAAAAAAACTTCTCCT AGGTAGATTTTTTTATCCTTGATATCAGATGTCAAAATATAGTTTGCAAA GAAAGAACATGCCAGTTTTTCTCACAACGTTAAATGATTAAAAAAAAACT TCTCCTGTGTCAATTTTCTTATCCTAGATATCAGGTGACAATTGAAATGA AAGTATAAACAGCAAAGAAACCTACGAAGACGCATGTTTTTGACACAAAA TCTATTTGTAACGGTAGCATATAAAATGATTATGAAAGTGTAGAAAAAAA ATTACGTAACGAACGCCATTAAAAATGGACTTTATTTTACATCGTTACGT TGTAAATCGAACGTTCTTCAAAATTATAGTGACTAGACATAGCATGAAAT GTATCTACAATTCCACGTCGAATGAAAATGTACATACAAAATGATTAATA TAGATAAAGCTAGACACACGCAAATGTTTATTATAGACATAATGACCTTT AAGAAATGTATAGACCTGAAAGGTTATGTTTGTCCATTCTGTGTTATTAA GAGGTATTAGAAATAAAGATATTATCACCATTATT

Coding sequence (CDS) from alignment at Sc0000053:98867..112401+

>transcript:BL96760_cuf2 ID=transcript:BL96760_cuf2|Name=transcript:BL96760_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=3891bp|location=Sequence derived from alignment at Sc0000053:98867..112401+ (Branchiostoma lanceolatum)
ATCTGCGGCGTGGTGATCAGCTACCCATCGGGCATTTCGGCCTCCATCAA
GGCCCAGGCTGGTCTTCTGACCTTTGTCCTTGGCCTTGGAGCGGACATGC
GCAGTAATCTTCAAGGCCTCCTAGGTAACCTCAACGGCGACCCGAATGAC
GATTTCATCTTGCCAAACGGATCATACGTTCACGCGGCAACACCTGATGA
GCCAACGGAAAAGGAACTGTATTACAACTTTGGCAAGATGTGGTCTATTC
GGAGTGTGTGCCTTTGCGACCACACCAACGTTAACAACGCCACACTTTTC
CACAACTACCCGACGGATCCGTCTAACAACTCGCCGGAAAACTACGGAGA
TGACAACTTTGTGCCGAAGTTTTTCGACGACGACGATCTCTTTCCCAACG
AAGAGACGAGGAAGATGGCAGTAGCCGCTTGTGGAGCAGACAACAGGGAG
TGTATCTACGACATTGCCCTGACGAGCCAGGTCGACATCGGCCTCACCAC
CACGCAGTCGGAGACGGAGTATAGAACATCTAACGAGATCTTACGGAACA
ACGCGCCGGAAGTCTTTGCACCAACGGAGATCCGCGCTGTCGTCAACAAA
ACATACACCACTAAAGTACGCGGCATGGATGCGTGTCCATATGTTAACAT
TGCCGTGACGGGGGCTGGGAAGTTGACTAAAACCGGAAACTACAGCGCCG
ACTTCAGCTGGACGCCTACGAGCGAGCAGTTTGTAGCCATTGAGTTCACC
GTGAGCGACGACATGGGGGCCTCGACCATCACTGTCCCCGATGTCACCGT
CTGCGCATGTCAAAATGGCGGCATCTGCGATTTCGACGGCGTCACCGACA
GAGTCGAGGGATTCGCGCTCGCTGTTTGTATCTGCCCGACTGGTTTCATC
GGGACGACGTGCCAGACAGACGTGGACGCCTGCGAGGGGAACCCTTGCTT
TCAAGGAGTGGAGTGCACCGACCAACCTGCACCCCTTGCCCCGGGACAGC
CCGGCTACATCTGTGGAGCCTGTCCTTTCGACATGGTGGGGAACGGAGAG
ACATGTGCAGATTTGAACGAGTGTCTCCTTGATCCTTCGGACCGACGTGT
TCACCAATGTGTGAACGCCGACTGTGAGAACACGCCCGGTAGTTACTCCT
GCGTGTGTCACGACGGCTTCGCCAAGGAAGGGGACTCACACACTTGCACC
GACATAGATGAGTGCCGCAGCTTGAACACCAACGACTGCGACCCGCTGCA
CGGGATCTGTAACAACACCGTGGGATCCTACACCTGCTCCTGCCAGGCCG
GTTGCTACACCAACGACAACGGAAGAACTTGTCTAGATATAAACGAGTGC
ATGACCCAGAATGGTGGTTGTGAGCGGCTGTGCACCAACACCAAGGGAAG
CTACAGCTGTGAATGCGGGGTCGCCTACGTGCTGGCAGAAGACGGACACA
CGTGTGAAGAGCTGGATGAGTGTGCGGCGGAGCATGTTTGCGAGCAGATC
TGTGTGGACAAAGTGGGGTACTACGACTGTGAATGTGACGAACTCTTCAC
CTTGAACCTGGATGGACGCACGTGTGATCCCATCATCAACTGCTCAACCA
ACAACCCCTGCACTCCACCTCCCATCGGCCATTGCGCGATGAACCTCACG
GACTCGGGTGACCTTGAAGAGCAGTGTGTCTGTGCCGCCGGGTACCAGAT
CCTGCCAAACAACACGTGCGCAGACATCAACGAATGCAACAACGGGCACA
AGTGCGACGAGCACGGAGACTGCGTCAACACCGAGGGAAGCTACGAGTGC
TCCTGTCATCCGGGGTACAAGCTCGACAAGGATCATGGGAAACGGCATTG
TCAAAATATCGACGAGTGTGCCATTGACAACGGCAACTGTACCCACCTCT
GCGTGGACACCCCCGGATCCTTCTACTGCACATGTCCACTGGGCATGGTC
CTGGACAAGGACATGTGTACTTGCGTTGACATCGACGAATGTGCCGAAAA
CCTTGCCGAGTGTTCTGTGAACGCCCGCTGTAACAACACGAGCCCAGGGT
ACGACTGCATCTGCGATGCGGGCTACACTGGAGATGGCATCAAGTGTGGA
GATATCAACGAGTGTCTCTACCAGGACACTCATGATGTGCGGTGCAAGGT
CGGCTGCCAGAACACTCTTGGTTCATTTGTTTGCATCTGTTCCGTTGGCT
GGCAACGGGACAACGACAGCATTTCCTGTACAGATATGGACGAGTGTCTG
CTAGGTACGGACGGGTGCGATCACAACTGTCAAAACGCACCTGGCTCCTA
CACCTGTTCCTGTCGGGAGGGCTACCTGCTACGGCCGGACGGCCACACCT
GTCGACCAAACCTTTCTTCAGTAAGGACGACAGCACAGCCCGTGACATTA
CCACCATTACCACCAAGACCTAGCGAACATCCTAGTACAACAACAACGCA
GACAACCAAGACAAGTCGACCAGAGACCGTAACATTACCACCAAGAACTG
TCAGTAGCGAAAAGCCTAGTACAACAATAACGCAGACAACCCAGACAAGT
CGACGAGAGACCGTAACATTACCACCAAGAACTGTCAGTAGCGAAAAGCC
TAGTGTGAGAACAACAACACAAACATCATCAATGAGAACTGAAGCGTCTT
CTCTGCCTCCTTCCACAACCTTGATGGCAGCCTGCCAGGGAGGCTGTGGA
ACGGGAGGACGGTGTGAGATCGTAAACGGTTCTTCTACATGTGTCTGTGA
CGAAGGCTTTCAACTGACCAACGGAACATGTGTCGGGGCGGTCATTCCAG
TCAAGACGAAGGTACTGCTGCCGGCAGTCGCCCTCTCCGTCGGCATCCCT
CTGCTGTGCCTGGTTTGCGCCTGCCTCGCCGCTTACAGACGCAGGAAGAA
GCAAGTCAAATATTACACAGTCGACGGCGGCAGCACCAACAGCGGAGGAC
GTTGGATCTGGCTACCCAAACGTGAAGGCTCCTCTAGCAGCGGCTACTTC
ACTTGGACTCAGAACACACCAAACAGCGGCTCCATCGACAGTCTCTTCAA
CAGCAACGTCTTTCCCTGGACGTACAGCACACCCAACCAGAGCTCTAAAA
ACAGCGATATGAATAGCAACAGCTTCCCATGGACGTATAGCACACCGAAC
CAGAGCGCTAACAACAGTGACATGAACAGTAACGATTTCCCCTGGACGTA
CAGCAAACCGAAACCGAAAGATTTTCCTTGGACGTTCTGGAAAACAAACA
CCGATTCTGGAAACAGCGACAGCAAAAGCAACGACTTTCCATGGACGTAC
AGCAAACCAAACCAAAGCTCTACCAGCAGCGACGGAAAAACCAACGACTT
TCCATGGACTTACAGCAAACCTAACAGCAGCTCTGAAAACAGCGACAGGA
GCAGCAATGATTCTCCACGGACGTTCAGCAAACCAAACTGTAACTCAACC
AGCAGCGACTCACAAGAACTTGAACTGCCGGGTTTGAACAGGTATTTGCC
GTATCCGAACTCGTACCGGAGCTTGCGCAGTCTGAGCAGCGGCAGCATGT
CCCGGAGGTCCCTATCTATCCGGCTGACTGGTACCCTGAGTAACATGTCC
AGCATGGCCAGTCTGGGAAGCTCCTACCGACGAAACAAGTCGCCCGGCTC
TCCCGCGTGCGAACCCATCGCGTGTCCGAAGGAGGAAGATCCGGAGGCAT
TGAAAGAACATGACACCATCTTTGGATCGGACACAAAGTTTTGTATCCAG
CGACCACGATTCATCGATCCCAGCGCGTTTAAAGAGAAGAATGACGACCC
GCCTCAGAGCGAAGAACTGAAAGGCGACAAGGATGATGATGAGGAGGAGG
AGGAGGAGGAAACAAAACAAGCTTGCTTCAATCTACTTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96760gene:BL96760Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96760_cuf2-E1BL96760_cuf2-E1-1564476830-230369Branchiostoma lanceolatumexon
BL96760_cuf2-E2BL96760_cuf2-E2-1564476830-230371Branchiostoma lanceolatumexon
BL96760_cuf2-E3BL96760_cuf2-E3-1564476830-230373Branchiostoma lanceolatumexon
BL96760_cuf2-E4BL96760_cuf2-E4-1564476830-230375Branchiostoma lanceolatumexon
BL96760_cuf2-E5BL96760_cuf2-E5-1564476830-230377Branchiostoma lanceolatumexon
BL96760_cuf2-E6BL96760_cuf2-E6-1564476830-230379Branchiostoma lanceolatumexon
BL96760_cuf2-E7BL96760_cuf2-E7-1564476830-230381Branchiostoma lanceolatumexon
BL96760_cuf2-E8BL96760_cuf2-E8-1564476830-230383Branchiostoma lanceolatumexon
BL96760_cuf2-E9BL96760_cuf2-E9-1564476830-230385Branchiostoma lanceolatumexon
BL96760_cuf2-E10BL96760_cuf2-E10-1564476830-230387Branchiostoma lanceolatumexon
BL96760_cuf2-E11BL96760_cuf2-E11-1564476830-230389Branchiostoma lanceolatumexon
BL96760_cuf2-E12BL96760_cuf2-E12-1564476830-230391Branchiostoma lanceolatumexon
BL96760_cuf2-E13BL96760_cuf2-E13-1564476830-230393Branchiostoma lanceolatumexon
BL96760_cuf2-E14BL96760_cuf2-E14-1564476830-230395Branchiostoma lanceolatumexon
BL96760_cuf2-E15BL96760_cuf2-E15-1564476830-230397Branchiostoma lanceolatumexon
BL96760_cuf2-E16BL96760_cuf2-E16-1564476830-230399Branchiostoma lanceolatumexon
BL96760_cuf2-E17BL96760_cuf2-E17-1564476830-230401Branchiostoma lanceolatumexon
BL96760_cuf2-E18BL96760_cuf2-E18-1564476830-230403Branchiostoma lanceolatumexon
BL96760_cuf2-E19BL96760_cuf2-E19-1564476830-230405Branchiostoma lanceolatumexon
BL96760_cuf2-E20BL96760_cuf2-E20-1564476830-230407Branchiostoma lanceolatumexon
BL96760_cuf2-E21BL96760_cuf2-E21-1564476830-230410Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96760_cuf2transcript:BL96760_cuf2-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000053genomeSc0000053:98867..112401 +
Properties
Property NameValue
Transcript idBL96760_cuf2
Biotypeprotein_coding