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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96802_cuf8 >transcript:BL96802_cuf8-protein ID=transcript:BL96802_cuf8-protein|Name=transcript:BL96802_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=863bp
DHGSDEDNCTSKECFYPEHFKCESSGVCVRPDLQCDGGDDCEDGSDEDNC
TSKECFNPEHFKCESSGVCVRPYLQCDGGDDCEDGSDEKNCTSEDLECFN
PAYFMCESSGVCIPPNWECDGQFDCGDGSDEENCKGEECYNPDSFRCESS
GVCVPLSNECDGSNDCPDGADEENCTSYECYNPDHFKCQRGGGCVPRERQ
CDGVYDCEDGSDEENCTVCPLPNYFKCESGSKCVPPEEPCNGWVSCDDGS
DEDNCTSKECYNPEYFKCESSGVCVRPEWQCDGWVDCDHGSDEDNCTSKE
CFNPEHFKCESSGVCVRPYLQCDGGDDCEDGSDEKNCTSEDLECFNPAYF
MCESSGVCIPPNWECDGWFDCGDGSDEENCKGKECDNPDSFRCESSGVCV
PLSNECDGSKDCPDGADEENCTSYECYSPDHFKCQRSGGCVPREGQCDGV
YDCEDGSDEKNCTSKGIECDSPDHFKCASGEACIPPLEQCDYIYNCEDRS
DEEDCTSKECYNPDYLKCESNGVCVPPEKECNGWFECVDGSDEADCTSKE
CYNPDYLKCESSGICVPGKKCDGVGDCPGLSDEKNCTTSNGCPFLNQFKC
ESGSKCIDSEWQCDGWAQCEDGSDEDNCTSKECVDPTYFKCKSSGICIMP
DKQCDGDDDCEEGSDEKNCTSKECFYTYYLKCERSGVCFNPDKQCDGAYD
CEDRSDEENCTNKECDGFQCESSGICVGSWKRCNGQRECRDGSDEEYCWE
ECTIPGYLKARPDWQCDGISDCRDSSDEKYCTADDCPLPKHFCEPGSCIP
DAKLCDGVRDCGDQSDESGCVCTSVEFRCETSGSCVAPSGVCDGVTDCDD
ASDELLCQSCAEQ Run BLAST on NCBI mRNA from alignment at Sc0000090:759677..764537- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96802_cuf8 ID=transcript:BL96802_cuf8|Name=transcript:BL96802_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=4861bp|location=Sequence derived from alignment at Sc0000090:759677..764537- (Branchiostoma lanceolatum)
CGATCATGGTTCAGATGAGGACAACTGCACAAGCAAAGAGTGTTTCTACC
CCGAACATTTCAAGTGTGAAAGTAGTGGAGTGTGTGTCCGGCCAGACTTG
CAATGTGACGGAGGGGATGATTGTGAAGACGGTTCAGATGAGGACAACTG
CACAAGCAAAGAGTGTTTCAACCCCGAACATTTCAAGTGTGAAAGTAGTG
GAGTGTGTGTCCGGCCATACTTGCAATGTGACGGAGGGGATGATTGTGAA
GACGGTTCAGATGAGAAAAATTGCACAAGCGAAGATCTAGAGTGTTTCAA
CCCTGCCTATTTCATGTGTGAAAGTAGTGGAGTGTGTATCCCTCCCAATT
GGGAATGTGACGGACAGTTTGATTGTGGTGACGGTTCAGATGAGGAAAAT
TGCAAAGGTGAAGAATGTTACAACCCTGACTCTTTCAGGTGTGAAAGTAG
TGGAGTATGTGTCCCTCTGTCGAACGAATGTGACGGTTCTAATGATTGTC
CAGACGGTGCAGATGAGGAAAACTGCACAAGCTATGAGTGTTACAACCCC
GACCATTTCAAGTGTCAAAGAGGTGGAGGGTGTGTTCCTCGAGAGCGGCA
GTGTGACGGTGTGTATGATTGTGAGGACGGTTCAGATGAGGAAAATTGCA
CGGTGTGCCCCTTACCCAATTATTTCAAATGTGAAAGTGGTAGTAAGTGT
GTCCCTCCAGAGGAACCATGTAACGGATGGGTTAGTTGTGATGACGGTTC
AGATGAGGACAACTGCACGAGCAAAGAGTGTTACAACCCCGAATATTTCA
AGTGTGAAAGTAGTGGAGTGTGTGTCCGGCCTGAATGGCAGTGTGACGGG
TGGGTCGATTGTGATCATGGTTCAGATGAGGACAACTGCACAAGCAAAGA
GTGTTTCAACCCCGAACATTTCAAGTGTGAAAGTAGTGGAGTGTGTGTCC
GGCCATACTTGCAATGTGACGGAGGGGATGATTGTGAAGACGGTTCAGAT
GAGAAAAATTGCACAAGCGAAGATCTAGAGTGTTTCAACCCTGCCTATTT
CATGTGTGAAAGTAGTGGAGTGTGTATCCCTCCCAATTGGGAATGTGACG
GATGGTTTGATTGTGGTGACGGTTCAGATGAGGAAAATTGCAAAGGTAAA
GAATGTGACAACCCTGACTCTTTCAGGTGTGAAAGTAGTGGAGTATGTGT
CCCTCTGTCGAACGAATGTGACGGTTCTAAGGATTGTCCAGACGGTGCAG
ATGAGGAAAACTGCACAAGCTATGAGTGTTACAGCCCCGACCATTTCAAG
TGTCAAAGAAGTGGAGGGTGTGTTCCTCGAGAGGGGCAGTGTGACGGTGT
GTATGATTGTGAGGACGGTTCAGATGAGAAAAATTGCACAAGCAAAGGTA
TCGAGTGTGACAGCCCCGACCATTTTAAATGTGCGAGTGGAGAAGCATGT
ATCCCTCCATTGGAGCAATGTGATTATATTTACAACTGTGAAGACCGTTC
AGATGAGGAAGATTGCACAAGCAAAGAGTGTTACAACCCTGACTATCTCA
AGTGTGAAAGTAATGGAGTGTGTGTCCCACCAGAGAAGGAATGTAACGGA
TGGTTTGAATGTGTAGACGGTTCAGACGAGGCAGACTGCACAAGCAAAGA
GTGTTACAACCCTGACTATTTGAAGTGTGAAAGTAGTGGCATCTGTGTCC
CAGGGAAGAAATGTGACGGTGTGGGCGATTGCCCGGGCCTTTCAGATGAG
AAAAATTGCACAACGAGCAACGGATGCCCCTTTCTCAACCAGTTCAAATG
TGAAAGTGGTAGCAAGTGTATCGATTCAGAGTGGCAGTGTGACGGGTGGG
CTCAATGTGAAGACGGTTCAGATGAGGATAATTGCACAAGCAAAGAGTGT
GTCGACCCCACCTACTTCAAGTGTAAAAGTAGTGGCATCTGTATTATGCC
AGACAAACAATGTGACGGTGATGATGATTGTGAAGAAGGTTCAGACGAGA
AAAATTGCACAAGTAAGGAGTGTTTCTACACCTATTATTTAAAATGTGAA
AGAAGTGGGGTGTGTTTTAATCCAGACAAACAATGTGACGGTGCGTATGA
TTGTGAAGACCGTTCAGATGAGGAAAATTGCACAAACAAAGAGTGTGACG
GTTTTCAGTGTGAAAGTAGTGGGATATGTGTCGGTTCATGGAAGCGATGT
AACGGACAGCGTGAATGTCGAGACGGTTCAGATGAGGAATATTGCTGGGA
AGAGTGCACCATACCCGGCTACTTAAAGGCCCGTCCAGACTGGCAATGCG
ACGGTATCAGTGATTGTCGCGATAGTTCCGATGAGAAATACTGCACAGCC
GATGATTGTCCACTGCCCAAACATTTCTGTGAACCTGGCTCCTGCATCCC
TGACGCTAAGCTCTGCGATGGCGTCCGTGACTGTGGCGACCAGTCCGACG
AGAGTGGCTGCGGTAAGCCCACCTTCTCATTTATAATATGTTCATCCTTG
TGTGGCCGCGGGATGCATAGTAAGTCATAAAAATGGTTTGAAATTGGCAC
ATGACACGGACAGCTTATTACTACATACAAATGTACTTCTAAATGTTTAT
TGGGCTCTAAAACGCGATGGCGTTTGCAGACTTTCCGATGCACAAATGTA
CATAAACACCATGGTTTCACTATGATAGGAAACGTCGTCTTGAACCATGG
GGATAAGGGGATTAATTTTGGGTCGGCAACAGGACCCTTTAAGACACTAG
CAGTGTTTATACCAGGCGCATTTGGCGAACTTTGAAACCTTGTTTTGGAA
AATTGACGGGTTGCTCCAGTCCTTGCTGGATATGGTTTATAACGGTTTTA
CTGCCACGGCCCGTTACGTACATGGGATACTAGATGGATGGGCGGATGGA
TGGATATATAGTTAGATGAATAGATAGATTGATAAAATTTACTTGTGGAA
CAATTTATGATAATTCGTCTTATATTTTCATATCCTTTTGTCTAGCCAAA
GACTTTAAAAATGGCCTGTTTGCTTAGCGCTCAACATTTTAGAAATAGTA
TGGACGTTGAAATACACACACGACTAGTACCCTGGTGTAGTGATTGCACA
AACGTGTGTGGCCCAAGGGCTACTGAAACGGAATAGGGCGCTGCCCTTTG
CACAATCTGGTTCAGGAAGGACTAACTTCAACTCTTGTCAAAAGGGTCCT
GCCAGTCTTGTAACCTATGCTGCATGCAGTATGCATATAAAGCTGAATGA
GTGATGTCGCACTAAATAATTCAACTGCAAATACCTGAACTGTTTCAGTG
ACTAGACCTCGTGGTATGGAAACAAAATGGCATCTATTTGGGAACGCTTT
CAGCGGACCTATCAGTAAATTATTTAGATTGAAAAAAATCCGGGAACTGT
ACGGGAATTTACACAGGGCATTAGAGATAAATAGTGGACAATACGGTTAA
ATCTGTGTTTATCATTAGGCAGGATCAAACTTTCTGACAGAAAGATTCTG
TCGACAGTGCCAAAAACCACTTTCCTGTCAATTCATTCCTATGCTTCATT
TGTCTCATTTTCCTCTAGTCATATGTTACCGTCGCTAGAGCAACAATGCC
TTTATTGCCAGTCTTGCCATTTCTATTCTGAAGCTTGCATATTCCCCTGG
TATAGAATATTGAAGTAGAAGCCAGTAATGTAAAATGTTGGATATTTGTT
TTTGCACAACCAGTAATGTCTTTAGCCTACTAATACGTTTCGATGACATC
TTCCTCATTGCTTATCGCCACTATATGTAGACGTGAAATGTTAGTTTCCT
TGCGTTTTTCTACGTAATTTTTTTTTTCCTTTTCAGAGATTCATTATACC
AATAATTGTTTTTCTGTGGATCTTTTTCTGACAGACAAATATTTGTGTTC
ATGAAAGACTGGAGACAAAAAAGACCTTTTGAGAAGTTTAAGAAGTCATT
TTTTTCTCACAGTGTTTGATACTTTTATGTTTTTTTTATTTATTTTGCTT
TTGGACAAACAAGGACGATATGGCTCTGCACTCAAGTTTTTTTATAACCT
ATTTTTTAAAGTGCCATATACAGCGAACAACAAGTCAATTTTTACACCTT
GGTGGTTTGACTGTTTGAACAATGCGGGTATCAAAAAGCCTACAAATAGG
TCAAGTATGCTGATTATGGTACGTCTGCGCACATCAAACGCGCCTGTACA
ATGTGAAAAGACCAACAGGGCATTTTTTCAGTCTACTAAAGGTGATTGAT
TGATTGATTGATTGATTGATTGATTGATCGGTCGATTGGTTGATTGTCTG
ATTGATTGAAGATGCTTCGAACTTTAAATGTTGTATAGTGTGCACCAGTG
TCGAGTTCCGGTGCGAGACCAGCGGCAGCTGCGTGGCGCCCTCGGGAGTG
TGTGACGGCGTCACCGACTGCGACGACGCGTCGGACGAGCTGCTGTGTCG
TGAGTTTTATACAGATTACTAGAATGATTAGATATAAAGAATCATGGCTT
GGAATTACTAGGATTTCTAAATGTATAACAATCATGACTGTCTTAGATAG
CTTGAAACAGCGGGGCACAAGGTCCGATTATGTCAGTAGCCTCAGCGATA
ACCAACTTTCTGTTGCATTGCATTTTTGTCAAGGTGTACTTCATACAATC
TGGTTATCATATTCGATTACTACTACTACAAGTAATGATAATAATGGGTT
TTATTAAAAGAACATTGAATTGAGGGGCACCACTTAGGAAATAAGTTATC
AATACATAACAAGTCGTGATTTATTTTTCAATTGTTATTGTGGAAGGTTG
TACAAAAAGCTGACGTTGCTTTCCAAATCTACATTTCTGCAGAGTCGTGT
GCAGAGCAGAG Coding sequence (CDS) from alignment at Sc0000090:759677..764537- >transcript:BL96802_cuf8 ID=transcript:BL96802_cuf8|Name=transcript:BL96802_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=2589bp|location=Sequence derived from alignment at Sc0000090:759677..764537- (Branchiostoma lanceolatum)
GATCATGGTTCAGATGAGGACAACTGCACAAGCAAAGAGTGTTTCTACCC
CGAACATTTCAAGTGTGAAAGTAGTGGAGTGTGTGTCCGGCCAGACTTGC
AATGTGACGGAGGGGATGATTGTGAAGACGGTTCAGATGAGGACAACTGC
ACAAGCAAAGAGTGTTTCAACCCCGAACATTTCAAGTGTGAAAGTAGTGG
AGTGTGTGTCCGGCCATACTTGCAATGTGACGGAGGGGATGATTGTGAAG
ACGGTTCAGATGAGAAAAATTGCACAAGCGAAGATCTAGAGTGTTTCAAC
CCTGCCTATTTCATGTGTGAAAGTAGTGGAGTGTGTATCCCTCCCAATTG
GGAATGTGACGGACAGTTTGATTGTGGTGACGGTTCAGATGAGGAAAATT
GCAAAGGTGAAGAATGTTACAACCCTGACTCTTTCAGGTGTGAAAGTAGT
GGAGTATGTGTCCCTCTGTCGAACGAATGTGACGGTTCTAATGATTGTCC
AGACGGTGCAGATGAGGAAAACTGCACAAGCTATGAGTGTTACAACCCCG
ACCATTTCAAGTGTCAAAGAGGTGGAGGGTGTGTTCCTCGAGAGCGGCAG
TGTGACGGTGTGTATGATTGTGAGGACGGTTCAGATGAGGAAAATTGCAC
GGTGTGCCCCTTACCCAATTATTTCAAATGTGAAAGTGGTAGTAAGTGTG
TCCCTCCAGAGGAACCATGTAACGGATGGGTTAGTTGTGATGACGGTTCA
GATGAGGACAACTGCACGAGCAAAGAGTGTTACAACCCCGAATATTTCAA
GTGTGAAAGTAGTGGAGTGTGTGTCCGGCCTGAATGGCAGTGTGACGGGT
GGGTCGATTGTGATCATGGTTCAGATGAGGACAACTGCACAAGCAAAGAG
TGTTTCAACCCCGAACATTTCAAGTGTGAAAGTAGTGGAGTGTGTGTCCG
GCCATACTTGCAATGTGACGGAGGGGATGATTGTGAAGACGGTTCAGATG
AGAAAAATTGCACAAGCGAAGATCTAGAGTGTTTCAACCCTGCCTATTTC
ATGTGTGAAAGTAGTGGAGTGTGTATCCCTCCCAATTGGGAATGTGACGG
ATGGTTTGATTGTGGTGACGGTTCAGATGAGGAAAATTGCAAAGGTAAAG
AATGTGACAACCCTGACTCTTTCAGGTGTGAAAGTAGTGGAGTATGTGTC
CCTCTGTCGAACGAATGTGACGGTTCTAAGGATTGTCCAGACGGTGCAGA
TGAGGAAAACTGCACAAGCTATGAGTGTTACAGCCCCGACCATTTCAAGT
GTCAAAGAAGTGGAGGGTGTGTTCCTCGAGAGGGGCAGTGTGACGGTGTG
TATGATTGTGAGGACGGTTCAGATGAGAAAAATTGCACAAGCAAAGGTAT
CGAGTGTGACAGCCCCGACCATTTTAAATGTGCGAGTGGAGAAGCATGTA
TCCCTCCATTGGAGCAATGTGATTATATTTACAACTGTGAAGACCGTTCA
GATGAGGAAGATTGCACAAGCAAAGAGTGTTACAACCCTGACTATCTCAA
GTGTGAAAGTAATGGAGTGTGTGTCCCACCAGAGAAGGAATGTAACGGAT
GGTTTGAATGTGTAGACGGTTCAGACGAGGCAGACTGCACAAGCAAAGAG
TGTTACAACCCTGACTATTTGAAGTGTGAAAGTAGTGGCATCTGTGTCCC
AGGGAAGAAATGTGACGGTGTGGGCGATTGCCCGGGCCTTTCAGATGAGA
AAAATTGCACAACGAGCAACGGATGCCCCTTTCTCAACCAGTTCAAATGT
GAAAGTGGTAGCAAGTGTATCGATTCAGAGTGGCAGTGTGACGGGTGGGC
TCAATGTGAAGACGGTTCAGATGAGGATAATTGCACAAGCAAAGAGTGTG
TCGACCCCACCTACTTCAAGTGTAAAAGTAGTGGCATCTGTATTATGCCA
GACAAACAATGTGACGGTGATGATGATTGTGAAGAAGGTTCAGACGAGAA
AAATTGCACAAGTAAGGAGTGTTTCTACACCTATTATTTAAAATGTGAAA
GAAGTGGGGTGTGTTTTAATCCAGACAAACAATGTGACGGTGCGTATGAT
TGTGAAGACCGTTCAGATGAGGAAAATTGCACAAACAAAGAGTGTGACGG
TTTTCAGTGTGAAAGTAGTGGGATATGTGTCGGTTCATGGAAGCGATGTA
ACGGACAGCGTGAATGTCGAGACGGTTCAGATGAGGAATATTGCTGGGAA
GAGTGCACCATACCCGGCTACTTAAAGGCCCGTCCAGACTGGCAATGCGA
CGGTATCAGTGATTGTCGCGATAGTTCCGATGAGAAATACTGCACAGCCG
ATGATTGTCCACTGCCCAAACATTTCTGTGAACCTGGCTCCTGCATCCCT
GACGCTAAGCTCTGCGATGGCGTCCGTGACTGTGGCGACCAGTCCGACGA
GAGTGGCTGCGTGTGCACCAGTGTCGAGTTCCGGTGCGAGACCAGCGGCA
GCTGCGTGGCGCCCTCGGGAGTGTGTGACGGCGTCACCGACTGCGACGAC
GCGTCGGACGAGCTGCTGTGTCAGTCGTGTGCAGAGCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000090 | genome | Sc0000090:759677..764537 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96802_cuf8 |
| Biotype | protein_coding |
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