transcript:BL96812_cuf1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96812_cuf1
Unique Nametranscript:BL96812_cuf1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96812_cuf1

>transcript:BL96812_cuf1-protein ID=transcript:BL96812_cuf1-protein|Name=transcript:BL96812_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=805bp
AVVACKSKLQLAFALSTVTSSIMFVLTAYVPRFCGSVPGLLCEDVDQEKW
WVVASVVAGMMLAEVVMVLCICLSPEEVMEPEAKLFWVPGYNGVFLNQHL
LLNKKTKLNSPQEFQKKHQTSKNTHVFICTTMFRESEEEMSQLIKSIRDM
ATSPSKEDRRKYESHILFDDGCKQGDLQHFAIQLLSIIHKMTKTGTERNP
QSLLDECIKWQTPYGLQLQFDWKADDGDNTRGMRFFIHLKDNLIVKNKKR
WSQIMYMTYILDYAAYYKPLGMESGAIEDAQIKPPSNRPDGSLRLHGQTP
WEGFRAPPNVEQVISIDLGEELWVTGIILQAGGAGGVVTGGDTSRRPGGL
VTKIMVADQEIQVPWPDKTEVDSTVTCLLEPEIWTKTLKIVLLDWEGRED
SPPNPPCLRMEILGYAKGDLDRDTYILATDADVKFTPKSANSLLDLAKWN
PDVGAVCGRTHCLGSGPMYWLQLFDYAVGHWFQKAANSTLGTVLCCPGCF
SVYRCSAVRECVSTYATKTEEAKDFLMKDMGEDRWLCTLMVERGKRLVYT
SIAEDSTFVPESFDEFFNQRRRWGPSTVANQIELLRKWKRGDINNSSVSF
LFMLYQLLLFFSFLIGPATAILIASGGLDFYVSGSFPLEATIAIMSILTF
LFGFICLRYKQDTQLKWAKALGSLFGVVMIMVMVALVEKIVMTVMDFVSR
GSIVPSSISNSSTGGIGLDQVLPAVDTFYFLATIGMFLVTGLVHLPEFYC
LFSGILYFLALPTTFIFLNIYGVCNLTDKSWGTREGASGGGNQDGGGDIF
DSIGK
Run BLAST on NCBI

mRNA from alignment at Sc0000209:77068..91745-

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96812_cuf1 ID=transcript:BL96812_cuf1|Name=transcript:BL96812_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=14678bp|location=Sequence derived from alignment at Sc0000209:77068..91745- (Branchiostoma lanceolatum)
TCGCAGTGGTCGCTTGCAAGAGCAAACTACAACTCGCCTTTGCGCTCTCC ACGGTGACGTCTTCCATCATGTTCGTTCTCACTGCGTATGTCCCACGCTT CTGTGGGTCCGTTCCGGGGTTGTTGTGCGAGGATGTTGATCAGGAGAAGT GGTGGGTTGTGGCGTCAGTAGTAGCGGGAATGATGCTGGCGGAGGTTGTG ATGGTGCTGTGCATCTGCCTCAGCCCCGAAGAGGTTATGGAACCAGAAGC AAAGGTACGTCAGTCTAGAGTAAGTCTAAGACACACCTTAACTGAAACTC ACTGAAATTTTCCACTGACTTAGTCTTCCTCAGCTGTCTGACCCAATTGG TGTGGACAAGTGACTTTCTGCGACTTCAACAACGGGTCAAATGTCGTCAA AAGTCGATGATAATATATGAGGCCATCCAATCCTCTCTCAACCGGGATGA GGGTAAATCGACTTCGGACGATATTGTGCCGTCACACGTACCAAAAGTCG ATTGGGTCAGACAGCTAAAGGAGAAGTTCTTGCCGGCGAGGTCAATGTTC AAGTCGGAGAACAGTTTTTTTTATATCAAAATGATCAAGAATTAAACAGA TCTATGTAAATCACAGCTAGACATAGATCACACGTTTTCTTCGATAAGTT TGACAATGGTCATTCTACTTTGCATCTTGTTGGTACATTGTCCAGCTTAC TTAGTTTCTATAAGAATATCTCTTCAAAACATGTCGGCGAACAGCTTGAA AAGATTGATCTTTCTACACTTTCCTTCTTAAGCTGTTCTGGGTTCCTGGG TACAACGGGGTGTTCCTGAATCAACATCTTCTTCTGAACAAGAAGACGAA GTTGAACAGCCCCCAGGAGTTCCAGAAGAAACACCAGACGTCTAAGAACA CCCACGTCTTCATCTGTACCACCATGTTCCGAGAGGTGAGTTATAATTAT TCACTGTCACATTGCGAATGTGGTATAATGGCGGCTGCTGTTAAGCCCCC CTCTCACTGGACCCGCGGCACGCTGGCGGCGTCGCTGCGGCCGATTGAAT TGACAAAGCACTCAACGAATTTCATCGACAAAAACGAACCTTTTTAAGCT TTGTGTGTTTTGTTGTCTTTTTGGCCATACTTGAATGTTTTGAATGAAAA TTCCCATTATAAAGTCAAGGGTAACACAAATCCAGCTTAGGACGAAGCGA CGCCACCAGCTTGCCGCGGATCCAGTGAGAGGGGGGCTTAACTTCAGACG CTTTATTCACGAACTTACACTCATGGCGCTCCATCGCTAATTATAAATTG TCAAGAATTGGTCAGGCTCGAAGGGATGAAATCTAGACACCGGTAAATGC TGCAAGACTTTTTAGTCAATGTACCTTTCGATTTTGTGCTACACCACACA CCCTGGACTTGCACAATGGCATTTCATTTAAAACAGTAAACCCATGAGTA TGGATCCAGAGAATGTCAGCTATAGATAGAAAATTATTGTCAGGTTGAGC AGATTCATGATTTCACATAGCGATATGGTTGTTTATGTTAGTTCAAAATA CCTGCATGGGGAATTGGAATGTGTTAAAGTTAAGAATAAGTCGTTTCACA GAGCCAAGTGCGTATCATTACGAACTGGGTCAATTCAGAAGCGTATAATG CAAATGAGCGGTCTGGACGTAGACAGGCGGAGTTTATTGACTCTCGGCTA GGTGTTAATTACTATGCTAATCCCCACAGCACACACTGCCAGCCCTGAGC TACACCTCCCATTATGTTGAACAAATCTCCCTATAACATGTTTAAGTCGA ATTTAGACTATTTAAGTCTTTCCCCAACTGAGCTAGACATACCGTTATGT TTGAAACACACGTCCGCTAATTGTGGTATTCAGTCTCCCTATAAGTTGAG TTTCCTCAACAGGGCTCACTAAATCCATTCTTGAGCTAAACCTACCGTTA TGTTTCAAACACACGACCGCTAATTGTGGTATTCAGTCTCCCTATAAGTT GAGTTTCCTCAACAGGGCTCACTAAATCCATTCTTGAGCTAAACCTACCG TTATGTTTGAAACACACGACCGCTAATTGTGGTGTTCAGTCTCCCTATAA GATGAGTTCAGACTATGAAAGTCTTTCCCCAACAGGGCTCACTGAGGCCG ACCCTGAGCCAGTCCTAGCTAGAACTTTGGCAACACAAATACCATGGTTG ACGTAAAGATAGAAAGAAACCATGACAAAGTAGAAAGCCCGACAAAAACG CCTAAAAACACGTCAAAAACCTGCCGGACCCACTCCTCTGCTTGGAGAGT AGTTGATTCCTGCCATGGGGCTAGGACGATCCGCGTGTGTGGCCAACACC GCTTCCCACGCTAAAGTGACCACTCTGAGACAGATGGCCCGTGATATCTA CGTCACAGGAAAGGACGTCACAGGAAAGGAGAGAGCTGATTGGCTTCACT ATTGAAGCGAAATTCCGTCACCGAACTGTGAAGGAAGACCATTGTTTAAC TCTCTAATGAACGCATGTGAATACAGGAGACCGCTTCAAGCATCCACTGT TCCCAAATCAGCCAGCTAGAGAAACTCCAGTCAGCCAGAGAACCTCCGGG ATTGTAGCACACTTCGTAATGATTAATTCAAGGATACAAAGCATTGGTAT TTGGTGTCTTTGGTCTAGAGTCAAGCTACCACACGGTTATTTGCTAGCGC CAAGGTGCCAATAGCACTCCGCACAGCGGGGGAGCCGCAGAAACTGCGGT TTTCCATAATACGCTTCTGAATTGGCTCAGTTCGTAATGGCACATTGTGG TCTAATGTCCTAAAAATTTAGGACTCCTCGCAGGTGGACGAAATTTTTTT GTACATGTCAAAAGCCTTAACCTTTGACCTTACATCACAATGCATCACGA CTGCACATGCGCACTTGGCAATGCGATATGACTTATTTGCTGCAGTCCGA GGAGGAGATGAGTCAGCTGATCAAGTCCATCCGGGACATGGCGACGAGCC CCAGCAAAGAGGACCGCCGGAAGTACGAGTCCCACATCCTGTTCGACGAC GGCTGCAAGCAAGGTGACCTTCAACATTTCGCCATCCAGCTCCTGTCAAT CATCCACAAGATGACCAAAAGTAAGGAAACTATTTCATTGGTGTGATATT TGGAAATGCTGATTGACCGTTGGTTCAGAAATGTTAGAACATAAGGTAGA TGTTGTCTTAGGCTGGAAATATTTTTCATTGCCAACTTATGTGATAATTG TTAATCACAGAACAAGGTGAGTGACCACCAATGAAATCTATGGATACAGA AGAAGAATTTTATTGCGGGACAATTGTAACTGGTACAGTACTAGTGTATG GCAACTTAGGCACATGAGAGTTGAACTATTGCTAATTGTTGACAAATATA GAGAACTAATCTAATCTATGACTAACAGTTAAAAGAATCTATAGAAAAAT GCACATGCTAACACTCTAGAGTACAATATGTTGGTAACAGTATGCTGTGT CAGGAATACACAGTACTGTATTTGCTTTTGCTAGGGGTAGCATGCCTGTC TATTCCTTCCGTTAGTGGTTTCATCGGGTGGGTAATTCAATGGTTAACAA AGCTCTGTATACAAAACTCAGGGGAATATACCTGCCAACGTTTCGGTAGT TCTTCTGCTATTAATTACCAGGACAATATTGACTGGCAGTTATAGATTAT ACTGCTAGGCGGCGCTGCAGTGAGAAGTATGCGGTCCAAAACGTGACTAA GTTTGTATCCCCCCTCTCCCCTTCAGCATTGCCATGAAGAAGGCAGCAAT ACATAAGCTGTACATATGTCCTTTGTATAAGGAACTTTGCTAACCGTCTA TCATTTTACATACAGCCGGGACCGAGAGGAACCCCCAAAGCCTGCTTGAT GAGTGCATCAAATGGCAGACGCCGTATGGGCTGCAGCTCCAGTTCGACTG GAAAGCTGATGACGGCGACAACACCAGAGGCATGAGGTTCTTTATCCACC TCAAAGATAACCTGATCGTAAGTACATGCCTTATATGGGAAAGTGGGCGT GAATAATTATATCACTGTCCCGTCAACCACAGTGATTGACAGCGCTTCCG GGCACCGTCTTGGACAGTCATGCTGTATCCCGTTCTGTGCCCGAATGGGC ACGGAACAGGATAGGCACGGTTCGGGACACGACACCTGTCACACATGAGT CAGATACTTAGTACGGGGGGCAGTCAGAAACTAATGCAAGTGGTTTCGTT TCATAACAGGCTCATTTTTACATCAAATGAGTTGAAATTTGGCACAAATG TGGAGGCATATATCTTCTTGGGACTAGAATATTACAGTTTATTGTTCAAA TTTTCATGAGCGACTGAGTTGGTTTCAAGCTCACCACTCACTTGAAAGTC CTTTAGAAGCAAAGAGCAGCACAAGGGAGAATCAATTACCATTTATCATG TAGAATCTTTTCTGCCTTCCCTTAGGTGAAGAACAAGAAGCGTTGGAGTC AGATCATGTACATGACCTACATACTAGACTACGCAGGTAAAGAAGCACCC TTGCCAGTTTTGTCTCTTAGCAATGAAAGCATATTATCACATAGCCAGAT GGCGTCAACCAATCAGAAGCCTCCATTGCCCATGTGTTAATCGCCATAAC ACACCGTGATCGTGATCATCATTCCTCCCATTATGTATAGGATAACACAC CGGGTCCCGTGATCATCATTCCTCCCTTTATGTCATCATTCCTCCCATTA TAGAGGGGGAGGTCATTTTTTTGTTAACATTCGTATAATGTATATTTTTT CCCAAAAATGTTTACTATCTTAGAATAAATCAAATCTTTTGTAAGCATAT GACAAAATAGAATCAACCATTTCAATACAAGTCAAATCTAAACGGGCGAA ACTATATGTTAGTGCGATTATAGTCAATGTTCATACCGTACAAATTCCAA ACACAGCTAGCAGTAAATGTAGAACGATAATTTCACCTCACGTATGGTTA GTAGGGCTAAATGCAGAAATGTTCGCGGTGGTTTTATGTTCGCGGTTTTC GCGGCGACCGTTTCACCGCGAACTTAAAGCCACTGCAAACATTTTGTCCA TTACGTAACATGACCAGTTTACGTCCGATTTATTCAAAACGTTATTTATC CTAAAACCGCGCGGACAGAGCCAAATGTTTAACCCATGGGTAGAAATATC AGCTCTTCTAACAATAAAATGCATAGTCTGTAAGTTTTTCTCCGCCTGTT TAACGCCGTACGAGCATATATTTATACTGGGGTATATGGTGTAGAATTGT GCTAGGCTTACCCTTTATCGTCCACCTCAGTATTTTCCCTTCTAGCGCTA TGCTTAAAGAACATAGACCGGAAAAAATACACAGTCACTGTCGAAAGTAG TCTGCAGACAAATGACAGTAAAGTCACTATGTTTGTCCGTCCGCTTGCCC GACGCGATGGAAGAAAACAATTTTTGTATTATGAATTTCCCCGAAATCGG CAGCACGTGGCGTTCACGTGATAAACGCATGGCCATGATGTTATGTCGTA CAAAAATGTATCATCTGAGCGGGGGTCGCTAGGTTGTATCAAACCTGCCT AAAACTGGCAAGAGTTTCAAACCTCGAATCACCATGGATAGTCTGCATAT CAAAGAAAGGTTTAACGTCAGGTACTTTTAAAAGATACTAGCTATCGTGT AACTTAGAAAAAAACATGATGGAATACGAGCTGTCGAATTACATATGAAA TGCGTCATGTATGACGCTTCCGTGCAACTTGTTGTTACAGGTTCAGGAGC TTATTCTGTTATGTCGCTGGACGTAAACCCTTTTAATGTTTTGTATAATA GAGAGAAATGGCTGAGGATCATACTTATGACGTTCTTTGTTTCTCATGAG AACAGGCTTTGGCATAATACACCGCGACATGTGGACATGACCCAATCTGG ACGTTAACTACTCCCGCACGTAAATAGGTCATGTTACGTTAGCAGTATGT GACTATAGCGCTGCCGCGAACTTAAAACCACCGCGAACACTCAATTTTGC CTTAGCGCGAAATAAAAAACACGCGATCTTCAATGCATTTACAGTATCGA ATTAAGGCATTTTTCAACAGATATGTTGACCAGCCTTAGACCTGCATATT GATACTACCTTTTCTTATATTAGCTTACTACAAACCACTGGGTATGGAGA GTGGCGCCATCGAAGACGCTCAGATCAAACCGCCTTCGAACCGTCCAGAT GGCTCCCTCCGTCTGCATGGGCAGACGCCATGGGAAGGCTTCCGGGCCCC TCCTAATGTTGAGCAGGTGAGAACAGATGTTTGCAGTCACGTGACTCATG ACGTAATGTAGCGTCGGCCATGTTGGTAGGTTAAGGTCTCATTCCTGTGT TAGGCTGTTACATTGGAATCAACGTTGAAATACGCAACTTTATGACTAAA AATATAGAAAAAAAATTATGGAGTCGTTTAACTTTCTCTTGGAAGCACAC GTGTTTGTCATGCAGCAAAAAAAGATTCACCCAAAACTAACCGTGACAAC GATATTTATCGCATTTCAAACTGCAAGTATCCACTATCCGCACGAGGCCG CTGTTGTACCGCCAGCGCCGACCGCAGCACTCATAGAAAAATGCGTATCG CTCGTATCCTATCGCTCGAATGACGAAACTTTCCTACCTAATTCTGACAG TTGTAAACAAGCTTTCATCTCAAATTCTTCTTATATCAAGTCGGGCCGAT AAAAGGCAATTTATGATCCACCTAAACACACGCCTCTCATGCCCGGATAT TGTTTTTGGACGGATTCTTTGGGAGGGTACACGCGGAGTAATACAGGAAT GAGACCTTAAGATGCGTGCGTAGTTATGCATTATGACAGGAATATTCCGA GCATTTAATGTCACCCTACCGCGAGATGTCTGTTGTTTCTCTATGCCTAT TCAGAGAGCACCAACGTATGGATAATTCTTTTTTATTTATTTTTAGAATC CTTATCTGTACGTTCCGCCATCTTGGATCATGTAGTTCGCCTACATGGAG GCGCGGTGATATATAGGAGTAGTAACGTTAACGTTACGTAACAAGAGAGT GTTACTTCTTCTTAATGTTGGTGGTTATTTTACATTTTCCACATCTCACA TTGTTCTTTCATGATGTACTACTAAAAAGTGACAGTGACAGCGGGCGAAA GCCTCTTTTCTTATAACGTTTTGTTGTTATTTACAGGTGATATCGATCGA CCTTGGAGAAGAGTTATGGGTGACGGGAATTATATTACAGGCAGGCGGCG CAGGTGGGGTTGTTACGGGCGGGGACACGAGCCGTCGCCCGGGGGGACTA GTAACGAAGATCATGGTTGCTGACCAGGTAGGGAAACATGATTCGCATTG ATATCTTGTCCACTACACTCATCTTCACCGAGTTATCAAGCATTTCCACA GCCACGATGTGTAGGCCAATCGAAAGCCTCCGTTATTGTTGGTTATACAG CCATAATGTCAAAAGCATGGGGTAATGAAGAAGAAAGCTGTGCATTGATG GTAGGCCAATAACCCACGCTTCTAGGAATGATGGGATTTAAACTTTTTAA CAATGCTAGTGTCAGTTCGAATTGCTTTTATGATAAAGATATTAATGACC CAATTTTCTCTTGGTGTTTTGGGTGATATAACGCTTGGCCAGTTTTCTAT TACCATTTCATAAACCACCTCATTTGCTTCGCTCACTCGGTGGTTTATCC GGAGGTTGTAGGTCACGACCAGGCCCTATGTCGCCGTCAGCACCTTCGGG TAGGCCAGAAACCCCTTATCATTTGAATGATAGATATCTGATTGGACAGC TGTCTAGTAACATTACATATATCTCAACCCAGGAAATACAGGTTCCGTGG CCGGACAAAACCGAAGTCGACAGTACAGTAACATGCCTTTTGGAACCAGA AATCTGGACAAAAACCTTAAAGATTGTACTTCTTGACTGGGAAGGAAGAG AAGACAGCCCACCGAATCCACCATGTCTGAGGATGGAGATACTGGGATAC GCCAAAGGTACTACACAGTCTTATCCTTGAGTCACATTTACTAGGGGCCC CTAGGGGTGTAGCCGATTTTATAGGCCCCCGCGGCTGCGCTGGCTCTTTC ACAGTCATGCTGCAATCACATTTCAAAACCGATCCCTTGTGGGCTAGTTG AGTATCCTTTGATTTTTTTCAACATTCTCTGTCATAAAAAGCGTTAAGCG CCCGACTTGTTTCCTAGGTGACCTTGACCGTGACACGTACATCCTGGCAA CCGACGCCGACGTCAAGTTCACCCCAAAGTCAGCCAACTCGCTGCTCGAC CTGGCGAAGTGGAACCCGGATGTAGGGGCCGTCTGCGGAAGGACACACTG CCTGGGCTCCGGGCCGATGTACTGGTTACAGCTGTTCGACTACGCCGTGG GACACTGGTTTCAAAAGGTACAAATCAATCCGCCGGAAAGCACCACTTCT GTGACGTCATGTTATGCCAATAGAACACATGACACGGTGAACAGTTAATT GCAAGTTGTAAAAAGTTGCGTTAGGGTTGGAAAGCCGTCACCAACCAATC ACGCTGCCGCCTACGGACAAGAGGCAACGTGATTGGTTGGTGCTTTCCCC TCCAACAGCAAGAGAGGGAGCATCTGATTGACTGACGGCTGGTCAGCTCT AGATCTATTGAGCGGTTAGGACGGACTTATATGTGATATACATGTATATG TACGAGAGAATACTAGGAGTGAAACTTGTACTTAGTCTATTATATCATGC AACTATTTTCAGGATCCAGCTACATTGTTCCTTTTGACGGCACCCCTCAG ATTTATCTTAAATCTGAAATGCTGAATATATTTACTAAATGCTGTAAACA AAATGGCGGTTTCTGTCTGGTCTGTTCCTGAACAATGACGTCAGAGCAAC CCCAGAACGAGGCTGCAGACCATTACGTAATTGCCAATCGCGGAGGGGGA GAGCGAGGAGAGCGCGAACGCGTGCACAGGTTAATTATTGGCGGATTGAT GTAAAAGAAATAAATAATCAATTTTCAAGATCCTGTGGTGCTTTCCTTTA TCTTAGGCCGCTAACAGTACCCTGGGAACTGTACTGTGCTGCCCGGGATG CTTCAGTGTGTACCGCTGCAGCGCCGTCAGGGAGTGTGTCTCCACCTACG CCACCAAGACAGAGGAGGCCAAAGACTTTCTCATGAAGGACATGGGGGAG GACCGCTGGCTATGCACACTCATGGTTAGTCGTATACTTCAAATGACCAT TTTTGACGACGCCTCAGGGGCGAGCCTATTGGTATATATATATATTGTGT GCTATTTGCAAGAATTCTAGGAATTGTACAGGAATGTGAAATACCACGGG ACGATAACTCAAGAGTACCTGGATGGATTGTCTTTAGGTGGGTAGGTCTT TGTGAGACCTTGAAATGATTGGATTTTGGGCCTCCTAGCAACTTTCTATG GTACTGCAGGGGAACTTTCGCTTTTTAAATCTCGCGTTCTGAACATGCTA TGGTTACGATTTTTTAGTGGTGGATAACTCATGTAAATTTGGACCTCCTA GCGGCCTTTATGAACTGCAGGAGCTGATTTTGTCTCAAAATTTGAAAGCG TACAAACAAAATAACACACCAAAGGCACATGATATACCATGCAGTACAGA GTGCCAACAATTCATAAACATATACGAAAAAAAGGAAATGTAGATTAAAG TGAACTTTTGAATACAAATCAAGGACATTGTACAAACGACTCTTAAACAC CGCTATATCGTTTTGAAATGGGTTCTTAACATGACAGTGAGTTAAACGGA ATTCCGGAAGTATGTCAATATGTGTAATCATATGCGGGAAGTAGGGATGT GTTTCATATTGTGATAAAAAACATCAGGTTCGCTATTTTGCTCCCTCCTA GGTTGAGCGCGGGAAGCGACTTGTGTACACCTCCATTGCCGAGGACAGCA CCTTCGTGCCTGAATCTTTCGACGAGTTCTTCAACCAGCGCAGGCGGTGG GGGCCTTCCACCGTGGCCAACCAAGTACGCGGCATTCAATTACTATCATA ATATGTTCACGATGACATGGGTGATAGTAATAGAGAGGGAAATATTTTGC CATTACTAGTGAATTCCTGAAATTGGCATGAGGCCAGATTGATGTTTAAT TATGAATTTTTATCCTAATACCCAATGGCTATGGGCAAGACTACTTTTCA GTGATGGTAGTACTGATTTTGAAGCAATGAAAGAATTCGAAATGGAATGT CATCCTCTCCGCCAGACTCACTGCGTTTGTATCTTAATTAAACGCATTAC CCGTCCTTCTCACCAGCCGTCAGCCAATCAGATGCTCTCCCTCGTGTTTT TGAAGGGAAAGATGCTAGCCAATCACGTTGCCTCCTTACCGTAAGTAGTA ATGTGATTGGCTGGTAATTTTTCATCCAACAACAGCATTGGGGACATCTG ATTAACGCAGGATGGTACGTCAGTATCGTTGCTTGACATACACAAACGGC TGGCATGGAAGAATGTGTAATGTATCTTAACACCCTTTCAATTTAGATTG AGCTCCTGAGGAAGTGGAAGAGGGGTGACATCAACAACTCCTCCGTATCA TTCCTCTTCATGCTGTACCAGCTGCTGCTCTTCTTCTCCTTTCTGATCGG CCCAGCCACTGCAATTCTGATCGCATCTGGTAGGTGTCGCGACAATGAGT TTGTCCGTTGGCGTGAATGCTTATCTCTATTAGCGAGGTGGTTCGGGACA TATTTCAATTGCCGCTCCACTTTACATATCTGCGCTTGCACAATAATGTC TTATCTATCAAACAGGTTAAGAAAAGTAAATATAGCGTTGACATTCTTAG CTAAGAAAGTAACATTATAGTGATGTGTGTAACGTTAGCTACATGTATTA GGTGCTGCAATTTTTGCCAGGATATGTTCGAATAGAAAACACTTATCGCC TTGTATCTCCTCTGTACTAACTCCAGTTCACTCATGTGATCCCTTCCCTA CCGAATATAGTCTGGGACAGGTTGATTTGGCAGTGAAGCGATCAAATGAT TGTGCAATCTGGAGCTAGATTTAGAATATATACAAGGCAAGAACACTTAT CGATACATATACAAACATTACAGGCGGTTTAGACTTTTACGTGTCTGGCA GTTTCCCACTGGAGGCGACTATAGCCATCATGTCGATCCTGACTTTCCTG TTCGGATTCATCTGCCTGAGGTATAAGCAAGACACTCAGCTGAAGGTACG TCTGCTGTGTAATCAAACATTTGACTAAAAGAACAGCTGCAGTTTAGACA TAGAGCATAGAGAATAGAGCATAGAGCATACTCTTTTTGTCTTTATGAAT GTATACTATTATACAATGTAGTAGAGACTTAAAAGATATTTTCTGTACCA GGAGACGCCGCTCCACGTAGCTTATCTCTTTAAGCCTTAATGCCGAATTA CCTCCATATAGATTACAAGCACTCTTATATATGTATTTTAGCATTTGTAA TTGTATTGCTGATTTCTAATAAGTCGTATTCTCTTGAAAATCATAAATAT ATCAAAATCAATATTGTTTAAATTAGCTGTAATTCAGATTGTTGTCTTGG TTGTCTGCTAAATGCTAATAAAGATCTTTTGACTTTTTTCTAGTAACATA TACAATGTACAACATATGAAAAATTGTCTAACAGTCTAAATCCTAATCGG ACTTTGACTATCACGGAGTTCACGTCTCCCTCCTATCTTATGCATAGAGA GTGTATATATTTTTTCGAAGTTGACTGAAAATTAGAGCTTGCAATGGATG ACAGCAATTGCAAAGGAACTGTTACAACAATTATTGCTCAAACTAACAGT TATAGGTTTTTCTTTTATAAAAAAAAACTTAATTGCCCTTCCTTCCTAAA CCCAACATTTGACTCTTGCAGTGGGCCAAGGCTCTGGGCTCCCTGTTTGG AGTCGTCATGATCATGGTTATGGTAGCTCTGGTGGAGAAGATTGTGATGA CTGTTATGGATTTCGTAAGCAGGGGCAGCATCGTCCCATCAAGTATCAGC AACAGCTCGACCGGAGGGATTGGCCTAGACCAGGGTAAATATGCCCCCCC TCCCCCTCTGGCTTTAGAATGTGACAATATTGTTGATGCATTTGTGTAAG TACTGTATTGTGTTATCTAATGTCTTACTTTTAGATTTGGAAGTTTATTG GATAAAGGAGATTCTTTTTACACAACCAGGTAATCTCACCTGCTAATGTT TTGGTGTCTGTCTGTCATCTTCATCAGAGCTTCTGACTGGAGTTCTGCCT CTCACCGTCATAAGCAGCCGATGTAGGTGGCGCTTTTGCGGTTAGAACAC TGTCCCAACCGTGGCTGAGTTTGTATCGCCCTCTCTGAAGCTCTGATGAA GGTGTCTGACAGACACCGAAACGTTAGCAGGCGAGATTACCTGGTTGTGT GAAAAGAATCTCCTATACCCGATATTCTACCAACCTGATGAAATTATTTT CGGTTGGAAGTTTATTGTTTATTGCAAGGGACAGGACTGCTTGGAGGATC CTCCTGAAAAGCAAGGGGTCAGTTTCTGGCCTGAGCACGTAGGCAGGTTT ATTGTTTTTACATCTAACTACAGCTACGTTGGTGTATCTTTTTTTTCTTG TCCTTTAGTTCTGCCAGCGGTTGACACGTTCTACTTCCTCGCTACCATCG GGATGTTCCTAGTGACAGGACTGGTACATCTTCCCGAGTTCTACTGTCTC TTCTCGGGAATTCTTTACTTCCTCGCCCTCCCCACAACTTTCATCTTCCT GAACATCTACGGGGTCTGCAACCTCACTGACAAGTCCTGGGGTGAGAAAG ACTGTCAATCATGATTAGGAGTTTAACCAATGATAGCATGTCAATCAATC ATGGTTCGACCAATGAGAGAGTGGCTGTATGTCCGTCAAATAGTAGCATT TTTATGTTTATATCCTGGACCTCTATGTTTTGACGGTGGTAATCGGGGCT ATGGGATTGGTCTATTTGGTCATCTTTAATAGAAACCAACTGAAGATCCT TATTCTTATTCTCAGACATTGCTTGGATTTTTCATAAGAACATTGTATGC AATGTATATTACCAAAATTATGGTGTTGCTGAGGGATGTTGGATACTGTA ACTACTATGATAAGATGAGTTCAGTTTTGGTATAAAACCTAGTTCTGCCA GATCTTTCCTTAGTCACCGACGAAAAATAGCGGATGCTGTCTGAAACATC TGACGGAGTAACAGCCGTTGCATAAGATATTTCTTTGGACACAACTAAAT GAACCTATATGCGAGACAGTGACAATGCTATGACAGAGGAAGCGACGCAG CTGGACAACTGGGCCGACCGCAACGACATGCTCTTGAACGGCAAGAAAAG TCAGTCGCTGCTGATCTGCTTTACCAGACACCCACCTGTACTGTCGCCTC TGTCTCTCGGGGGCGAACCTGTGCCAATCACCAGAGTCGCCAAAGGGCTC GGTTTCATCTTTGATGACAAACTTTCCTGGCGTGACCATGTGATGTCTAT GGTGTCAAAGGCATCGAGTAGGCTTCACTACCTCCGTCTGCTAGCAAAGC AGGGCATGAGTGTCGACGACCTTATTCAAGTGTACCTGAGTCTCATACGC TCGGTTCTAGAGTACGGGCACGTCCTTTTGGTTGGTTGCAGTGAGGAGCT GGAAGCTAGTATGGAGAGAGTGCAGAGGCGCGCCCTCCGGATTATCTCGC GCGGTGGCAGGCGCTCCATTCCAGACCTTCCCTCCCTGAAGGAGAGAAGA GAAGCGGCTGCTATGACTCTGTTCAAGGCCATGCTGAGAACTGAACATCC TTTGCACGACCTGGTGCCTGCTCTAAGACACTCTGCCACAGGAAGAACAC TAAGGAACAGTCACAACATCACTGTTCCCTATGCCAGAACTAAGAGACTG CAGCAATCCTTCCTGCATTGCGCCATCAGACTGTACAACAACTTACCTTC CGGGTCCTGAACATTCAGTCTTCCGTTTGACTTGACTTGACTTGAAGTAG TGCAGTGAATTTTCTTTAACAGCTCTGTATTTGTCTTTGTACATTGGTAA TGATTTTAATGAAATCTGTAACAAATGGTACACAATTCAGAGGGAACGCA GTTGTGTTCTCTGCCTATGTACTTTTGACGAAGAAATGTGTGTAAAATGT ATGTAATGAATAAAGTATGTATGTTTTCATATTAGCCTTAAATACGCGAA CACGACCTTAAACGTAAGTTCTTGCTTACTTCCGGCGACGTGCTTTAGAG CACTGGACTCAGAACCAATATGTCCCTGGTTCGATTCTCACCATGCACCG ACGTTGTGCCCTTGCCCTTGGGAAAGGCACTTTACATGACCTTCCCTGAC GGTGGAGTGACGCCCACCGAGCCCCTTTGGCTAATCTGTCAAAAATGTGT GCCGAAAACATACTACGGATTTGGTGCGCCAATGTGCCAACATCTGCACA TTGACATCTACCAATAACCGTTAATTTTTTAAATATTTTTTATATGATTG ATCTTAGGAACTCGAGAGGGGGCGAGCGGTGGTGGAAACCAGGACGGCGG CGGTGACATATTCGACTCTATCGGGAAG

Coding sequence (CDS) from alignment at Sc0000209:77068..91745-

>transcript:BL96812_cuf1 ID=transcript:BL96812_cuf1|Name=transcript:BL96812_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=2415bp|location=Sequence derived from alignment at Sc0000209:77068..91745- (Branchiostoma lanceolatum)
GCAGTGGTCGCTTGCAAGAGCAAACTACAACTCGCCTTTGCGCTCTCCAC
GGTGACGTCTTCCATCATGTTCGTTCTCACTGCGTATGTCCCACGCTTCT
GTGGGTCCGTTCCGGGGTTGTTGTGCGAGGATGTTGATCAGGAGAAGTGG
TGGGTTGTGGCGTCAGTAGTAGCGGGAATGATGCTGGCGGAGGTTGTGAT
GGTGCTGTGCATCTGCCTCAGCCCCGAAGAGGTTATGGAACCAGAAGCAA
AGCTGTTCTGGGTTCCTGGGTACAACGGGGTGTTCCTGAATCAACATCTT
CTTCTGAACAAGAAGACGAAGTTGAACAGCCCCCAGGAGTTCCAGAAGAA
ACACCAGACGTCTAAGAACACCCACGTCTTCATCTGTACCACCATGTTCC
GAGAGTCCGAGGAGGAGATGAGTCAGCTGATCAAGTCCATCCGGGACATG
GCGACGAGCCCCAGCAAAGAGGACCGCCGGAAGTACGAGTCCCACATCCT
GTTCGACGACGGCTGCAAGCAAGGTGACCTTCAACATTTCGCCATCCAGC
TCCTGTCAATCATCCACAAGATGACCAAAACCGGGACCGAGAGGAACCCC
CAAAGCCTGCTTGATGAGTGCATCAAATGGCAGACGCCGTATGGGCTGCA
GCTCCAGTTCGACTGGAAAGCTGATGACGGCGACAACACCAGAGGCATGA
GGTTCTTTATCCACCTCAAAGATAACCTGATCGTGAAGAACAAGAAGCGT
TGGAGTCAGATCATGTACATGACCTACATACTAGACTACGCAGCTTACTA
CAAACCACTGGGTATGGAGAGTGGCGCCATCGAAGACGCTCAGATCAAAC
CGCCTTCGAACCGTCCAGATGGCTCCCTCCGTCTGCATGGGCAGACGCCA
TGGGAAGGCTTCCGGGCCCCTCCTAATGTTGAGCAGGTGATATCGATCGA
CCTTGGAGAAGAGTTATGGGTGACGGGAATTATATTACAGGCAGGCGGCG
CAGGTGGGGTTGTTACGGGCGGGGACACGAGCCGTCGCCCGGGGGGACTA
GTAACGAAGATCATGGTTGCTGACCAGGAAATACAGGTTCCGTGGCCGGA
CAAAACCGAAGTCGACAGTACAGTAACATGCCTTTTGGAACCAGAAATCT
GGACAAAAACCTTAAAGATTGTACTTCTTGACTGGGAAGGAAGAGAAGAC
AGCCCACCGAATCCACCATGTCTGAGGATGGAGATACTGGGATACGCCAA
AGGTGACCTTGACCGTGACACGTACATCCTGGCAACCGACGCCGACGTCA
AGTTCACCCCAAAGTCAGCCAACTCGCTGCTCGACCTGGCGAAGTGGAAC
CCGGATGTAGGGGCCGTCTGCGGAAGGACACACTGCCTGGGCTCCGGGCC
GATGTACTGGTTACAGCTGTTCGACTACGCCGTGGGACACTGGTTTCAAA
AGGCCGCTAACAGTACCCTGGGAACTGTACTGTGCTGCCCGGGATGCTTC
AGTGTGTACCGCTGCAGCGCCGTCAGGGAGTGTGTCTCCACCTACGCCAC
CAAGACAGAGGAGGCCAAAGACTTTCTCATGAAGGACATGGGGGAGGACC
GCTGGCTATGCACACTCATGGTTGAGCGCGGGAAGCGACTTGTGTACACC
TCCATTGCCGAGGACAGCACCTTCGTGCCTGAATCTTTCGACGAGTTCTT
CAACCAGCGCAGGCGGTGGGGGCCTTCCACCGTGGCCAACCAAATTGAGC
TCCTGAGGAAGTGGAAGAGGGGTGACATCAACAACTCCTCCGTATCATTC
CTCTTCATGCTGTACCAGCTGCTGCTCTTCTTCTCCTTTCTGATCGGCCC
AGCCACTGCAATTCTGATCGCATCTGGCGGTTTAGACTTTTACGTGTCTG
GCAGTTTCCCACTGGAGGCGACTATAGCCATCATGTCGATCCTGACTTTC
CTGTTCGGATTCATCTGCCTGAGGTATAAGCAAGACACTCAGCTGAAGTG
GGCCAAGGCTCTGGGCTCCCTGTTTGGAGTCGTCATGATCATGGTTATGG
TAGCTCTGGTGGAGAAGATTGTGATGACTGTTATGGATTTCGTAAGCAGG
GGCAGCATCGTCCCATCAAGTATCAGCAACAGCTCGACCGGAGGGATTGG
CCTAGACCAGGTTCTGCCAGCGGTTGACACGTTCTACTTCCTCGCTACCA
TCGGGATGTTCCTAGTGACAGGACTGGTACATCTTCCCGAGTTCTACTGT
CTCTTCTCGGGAATTCTTTACTTCCTCGCCCTCCCCACAACTTTCATCTT
CCTGAACATCTACGGGGTCTGCAACCTCACTGACAAGTCCTGGGGAACTC
GAGAGGGGGCGAGCGGTGGTGGAAACCAGGACGGCGGCGGTGACATATTC
GACTCTATCGGGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96812gene:BL96812Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96812_cuf1-E1BL96812_cuf1-E1-1564476830-389616Branchiostoma lanceolatumexon
BL96812_cuf1-E2BL96812_cuf1-E2-1564476830-389613Branchiostoma lanceolatumexon
BL96812_cuf1-E3BL96812_cuf1-E3-1564476830-389611Branchiostoma lanceolatumexon
BL96812_cuf1-E4BL96812_cuf1-E4-1564476830-389609Branchiostoma lanceolatumexon
BL96812_cuf1-E5BL96812_cuf1-E5-1564476830-389607Branchiostoma lanceolatumexon
BL96812_cuf1-E6BL96812_cuf1-E6-1564476830-389605Branchiostoma lanceolatumexon
BL96812_cuf1-E7BL96812_cuf1-E7-1564476830-389603Branchiostoma lanceolatumexon
BL96812_cuf1-E8BL96812_cuf1-E8-1564476830-389601Branchiostoma lanceolatumexon
BL96812_cuf1-E9BL96812_cuf1-E9-1564476830-389599Branchiostoma lanceolatumexon
BL96812_cuf1-E10BL96812_cuf1-E10-1564476830-389597Branchiostoma lanceolatumexon
BL96812_cuf1-E11BL96812_cuf1-E11-1564476830-389595Branchiostoma lanceolatumexon
BL96812_cuf1-E12BL96812_cuf1-E12-1564476830-389593Branchiostoma lanceolatumexon
BL96812_cuf1-E13BL96812_cuf1-E13-1564476830-389591Branchiostoma lanceolatumexon
BL96812_cuf1-E14BL96812_cuf1-E14-1564476830-389589Branchiostoma lanceolatumexon
BL96812_cuf1-E15BL96812_cuf1-E15-1564476830-389587Branchiostoma lanceolatumexon
BL96812_cuf1-E16BL96812_cuf1-E16-1564476830-389585Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96812_cuf1transcript:BL96812_cuf1-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000209genomeSc0000209:77068..91745 -
Properties
Property NameValue
Transcript idBL96812_cuf1
Biotypeprotein_coding