|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96854_cuf2 >transcript:BL96854_cuf2-protein ID=transcript:BL96854_cuf2-protein|Name=transcript:BL96854_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=338bp
EQGANPLVKSRDYRSGEHGDSLLFHLNRLRRDNDYCDTYVTTDEGGFRVH
QAVLAAVSPRFKEEMELQTAEQEEKPLTTIRIKDISPTALSFLLDFAYTS
EISINLKHVEDIFKSAKKLAIPGVVFFCKEFLSQEINMDNCLKVLEVAGR
CDLHDIVEKVDGFILKNFDQMSESDLLQQLTYQQIASFMRSDDVRSSAEL
KLFNAAWRWLKYDSSRSAHAHDLMADIRFGLMSSLELKNHVQQVEFMRTD
PQCSRTLQEAYEYHLFPSLQPLRQNITTKVRSSKYYVITVGGAQKEPTNQ
CLYLDLAPELALSDGVAPRPEWKQFQRAPKARYQLTAA Run BLAST on NCBI mRNA from alignment at Sc0000007:6378630..6383253- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96854_cuf2 ID=transcript:BL96854_cuf2|Name=transcript:BL96854_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=4624bp|location=Sequence derived from alignment at Sc0000007:6378630..6383253- (Branchiostoma lanceolatum)
GAGCAGGGGGCCAACCCCCTGGTGAAGTCACGTGACTACAGGTCCGGTGA
ACACGGAGACAGTCTGCTGTTCCACCTGAACAGACTCAGGAGGGACAACG
ACTACTGTGATACGTACGTCACAACTGACGAGGGAGGCTTCAGGGTGCAT
CAAGTAAGGCTTCATTTCATAAATTAATTTCATACAGTTCGTCCATTTAT
TCACTCACTCGCTCACTCGCTCACTGACTCATTCACTCTTATCTTACTGA
CTGACTGACTGGCTGACTGACTCATTCATTCATTCATTCATTCATTCACT
CACTCACTCACTCACTCTCTCACACTCACACTTACTCACCCACTCACTCA
CTCACTCTCACTCTCTCTCTCACTCACTCACTCACTCACTCACTCACTCA
CTCACTCTCACTCACGCACGCACTCACTCACTCGTTCACTCACTCACGCA
CTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACTCACT
CACTGATAAATGGCTAGCTGTATTACCTTTGAACTCAACACCCTGTCACC
AAGCAAGTCAAACCTTTGCCACTCACTGATAAATGACTAGCTGTACTACC
TTCGTGAACTCAACACCCTGTCACCAAGCAAGTCAAACCTTTGCCACTCA
CTGATAAATGACTAGCTGTACTACCTTCGTGAACTCAACACCCTCACCAA
GCAAGTCAAACCTTTGCCACTCACTGATAAATGACTAGCTGTACTATCTT
CGTGAACTCAACACCCTGTCACCAAGCAAGTTAAACCTTTGCCACTCACT
GATAAATGACTAGCTGTACTACTTTCGTGAACTCAACACACTGTCATCAA
GCAAGTCAAACCTTTGCCACTCACTGATAAATGGCTAGCTGTACTATCTT
CGTGAACTCAACACCCTGTCACCAATCAAGTCAAACCTTTGCGGTGACAC
TATCCTCCCACGTTTTACCGTTTCATGCGACATTATCATTCCCCTCCCGT
GCCCAGGCCGTGCTGGCCGCCGTCAGCCCCAGGTTTAAGGAGGAGATGGA
ACTGCAGACGGCCGAGCAGGAGGAGAAACCGCTCACCACCATCCGCATCA
AGGACATCTCTCCTACTGCTCTAAGTACGAACTGTACTCCACAGGGCGCT
GGAAAAGTAGCGGAAATTGGCCAAATAGACAGATAACATGCCAAAGGTGT
TAGCTGGCCTGGGAATTTGCAATTGAGACCTAGGGAAACTGTACTCTTTG
GCCAGCTAAGTACTCTGCTATGTTTGTTATCTGTCTATTTGGCCAATTTC
TACTGTTTTCCAGCGACCTGTGGAGCCTGGTAGAGGCTACCTCCGTGAAG
CTTTTGGTCTGTCTGTCTGACTGTCTCAGCATCTGTGTTTCCGACCCACT
TCGGCCAACATAACTCAAGAAGCTCGATCTGGATGGATTGTAATGATATT
TGATACGTGGCGTTGATATCATTGAGGTCTGCGTCGGATCAAGGACGTCA
TGTTTTATGTATGGATTCTTGACTTTAAGTGTTGCTAGCTCCGTGAAGCT
TTTGGTGTACATGTGTCTGTCTGCCTCAGCAATTGTGTTTCCGACCTACT
TCGGTCGGCACAACTAAAGAAGCTATTGATTGTGATGATGTTTGATGCGT
TGTGGTCTAAGTCGAGTTTGAGTATCCTAGCTAGCGGGTTTTCTTGGTAC
TACAGTGGAACGGCCGTTTCTAATATCTTCTGTTCTGGGTATACAATGGT
CTTGATTTTTCAGCTTCAGATAGCCTTTTTTCTGGACTTGAATAGGCCTT
TCAAGTTCTATTTACCCATACAACGACAAATCTAACAATTGTGGTTGATA
TATCAGTACATGGATTTATTGAGAAATGCATGATCGATATCCTCTAATGT
AGCTAAAAATCATGAGAACTGAAGACGTATCTAGATGTTTCTGTCCTTGT
ATTTCTTCTAGGTTTTCTATTGGATTTTGCTTACACCTCTGAGATCTCCA
TTAACCTTAAGCACGTGGAAGACATCTTTAAGTCGGCCAAGAAGCTGGCG
ATACCTGGAGTCGTCTTCTTCTGTAAGGAGTTCCTGTCTCAGGAGATCAA
CATGGACAACTGTCTTAAGGTTTGGGCACAACCTTGAGTAACATTATATA
GTCTTAACGATGAATTTCTTTATAGGTAAAAAACTGCATGTTGAACAGTT
CAGAGACAGTTTTCAAGATTACCATTTTGTGACATTTTGCCTTCTTTCGA
CTAGCATGTTTACTTTCCTGGTGTTGCAATTGATACTTCATCACAAAATT
GTGTTTTTTTTTCCCCGAGAAACATTGAAAACCTGCTATATGCGACACGT
TTTTCTAGTTAAAAGGCTTAAAACAAAGTTTCTATGAGCTTCCCTAATCC
TTTGTTGTTCTTTGAAAATGAAGACATTGATTTTAATTGATTTATAACAA
TGTTGAGTACTTCGTACCCGCATCGCACAGGTATTGGAGGTTGCTGGCCG
GTGTGACCTACATGACATAGTGGAGAAGGTGGACGGGTTCATCCTGAAGA
ATTTTGACCAGATGTCGGAGTCAGACTTACTCCAGCAGCTCACCTACCAG
CAGATAGCATCCTTCATGCGCAGTGATGACGTCAGGTCAAGCGCAGGTAC
AAACACACGGGGGAATGAGTGTGTGAGGGAATGAATGAATGAGTGATTGG
ATTGATAAATGAATGAACGAAGGAAAGAAGGAATGGAGGAAGAAAGTAAA
GATGGAATGTAGGAGGGAAGAAAGAAATATGGGAATGGAAGGAATAAAAA
AAGGAATGAAAAGTAAGTAGAAAGCAAATGAAAGAGAAAAGAGAAATGAA
AGAATGAGAGTGGAAAGGAAAATGAAGACGACATATATGGTAGAATAGAT
GTCATGGAATTCTAAATATTATGTTGATTAGATAAGACTTATAATTCGAT
AAAAGGTTGCTGTAATTTGTCTTTATCCGACTCTTTCTTTCAGAATTGAA
ACTTTTTAACGCCGCCTGGCGGTGGCTGAAGTACGACAGTTCACGAAGCG
CGCATGCGCACGACTTGATGGCTGACATCCGATTCGGGCTGATGTCGTCA
CTGGAACTCAAGAACCACGTGCAACAGGTAAGACGTAAAAAAAACGTAAA
AAAACCTCATGCTCAAAGTTGTCATGGAGCCTTTGTTTAACACTGTTAAA
CTATTTAACAATGATATTCCAAGACCAATCATAGGACCGCAATGCAAGCA
AAGAGTAAAAGTATCCTTAGCACTCAGCGTGGTGCCTTGACAGAGTAAGG
TACCTTTACCCTGTTCAATTACCAGTCTCAAAGTCCTTTTACAGCAACAG
GCTCTTTCTACAATTTGCCAAACTATGCAACTCTCTCGATGACGACTCCC
GTAAACAAACCGCAAGCCTTCAACACCAATGTTAAAAAAGAAATCACTAT
TGCAGTACCAGTTGACTAGTCCCCTGCTGTAGTATCATCTGTACTGTACT
TGCACAACTGTGTGGTCCAAGGGCCAAGGAAATCGAGATGGGCGCCGTCC
TATGTACAATATGGTGTCGGAAGGACTTCATTATTACTTCTAACTCTACT
TGCTCTCTCTTTTCAGGTTGAGTTCATGCGGACGGACCCACAATGCAGCC
GGACTCTACAGGAAGCCTACGAGTACCACCTCTTCCCTTCCCTGCAGCCT
TTGCGGCAGAACATCACCACCAAGGTCAGGTCATCCAAGTACTACGTCAT
CACTGTGGGCGGGGCGCAGAAGGAACCAACCAATCAGGTAAAGGTTCTAC
GCCATCACTGTGGAACCAACCAATCAGGTAAATGTATCACGTCGTCACTG
TGGGCGGGGCACAGAAGGAATCAACCAATCAGATAAAGGTTCTAAGCCAT
CACTGTGGAACCAACCAACCAGGTACTACGCCATCACTGTGGGTGGGGCA
CAGAATGAAGCGACCAATCAGGTAAAGGTTCTACGTCAGCACTGTGGGCG
TGGTGGAGAAGGACCGACCAATCAGGTAAAAGTTCGGTTAAGCAATCTGC
TGATTTGACAATACAAAAAAGAATGAATATTACAAAATTTAAGCATCTAG
ATCTGTACATAAAACTATTGCTGATACCATAGAAATTTGCCAATGTCGCT
TGTCTTTTCTGCTATACAGTGTCTATACCTGGATCTGGCTCCAGAGCTCG
CCCTATCCGATGGTGTTGCACCGCGGCCTGAATGGAAGCAGTTCCAAAGA
GCACCCAAAGCCAGGTGAGAGCTTTTCAACAGCACCCTTTAAATGTTTAG
TATCATAGACTGGTTTGCAGGTTCTGAAGTCTTTTTAGATTACTTTCGCT
GACGGATGTAAGATTAAGAGGGTAAGGCAAATGCACAGGTGTGTGCTTTG
AAGAACGTACTGACTATAGCCTGGGGTCCATCCTTGTTAGCTCTGGCCCG
GTCCAACGTCCCCAGTTGCCAACACGTCGGGAGCGAGCCATGGCGCCAAA
GCTAATATGGCTTGACTCCAGGCTACGTACTGTCAAAACCTTGGCCCAAT
TTACCCACGCGTTTTTGTGTCGACTGCGAGTCTAAAAATCTAAACCTTTC
TCCAGATACCAGTTGACGGCTGCT Coding sequence (CDS) from alignment at Sc0000007:6378630..6383253- >transcript:BL96854_cuf2 ID=transcript:BL96854_cuf2|Name=transcript:BL96854_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1014bp|location=Sequence derived from alignment at Sc0000007:6378630..6383253- (Branchiostoma lanceolatum)
GAGCAGGGGGCCAACCCCCTGGTGAAGTCACGTGACTACAGGTCCGGTGA
ACACGGAGACAGTCTGCTGTTCCACCTGAACAGACTCAGGAGGGACAACG
ACTACTGTGATACGTACGTCACAACTGACGAGGGAGGCTTCAGGGTGCAT
CAAGCCGTGCTGGCCGCCGTCAGCCCCAGGTTTAAGGAGGAGATGGAACT
GCAGACGGCCGAGCAGGAGGAGAAACCGCTCACCACCATCCGCATCAAGG
ACATCTCTCCTACTGCTCTAAGTTTTCTATTGGATTTTGCTTACACCTCT
GAGATCTCCATTAACCTTAAGCACGTGGAAGACATCTTTAAGTCGGCCAA
GAAGCTGGCGATACCTGGAGTCGTCTTCTTCTGTAAGGAGTTCCTGTCTC
AGGAGATCAACATGGACAACTGTCTTAAGGTATTGGAGGTTGCTGGCCGG
TGTGACCTACATGACATAGTGGAGAAGGTGGACGGGTTCATCCTGAAGAA
TTTTGACCAGATGTCGGAGTCAGACTTACTCCAGCAGCTCACCTACCAGC
AGATAGCATCCTTCATGCGCAGTGATGACGTCAGGTCAAGCGCAGAATTG
AAACTTTTTAACGCCGCCTGGCGGTGGCTGAAGTACGACAGTTCACGAAG
CGCGCATGCGCACGACTTGATGGCTGACATCCGATTCGGGCTGATGTCGT
CACTGGAACTCAAGAACCACGTGCAACAGGTTGAGTTCATGCGGACGGAC
CCACAATGCAGCCGGACTCTACAGGAAGCCTACGAGTACCACCTCTTCCC
TTCCCTGCAGCCTTTGCGGCAGAACATCACCACCAAGGTCAGGTCATCCA
AGTACTACGTCATCACTGTGGGCGGGGCGCAGAAGGAACCAACCAATCAG
TGTCTATACCTGGATCTGGCTCCAGAGCTCGCCCTATCCGATGGTGTTGC
ACCGCGGCCTGAATGGAAGCAGTTCCAAAGAGCACCCAAAGCCAGATACC
AGTTGACGGCTGCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000007 | genome | Sc0000007:6378630..6383253 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96854_cuf2 |
| Biotype | protein_coding |
|
