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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96863_cuf1 >transcript:BL96863_cuf1-protein ID=transcript:BL96863_cuf1-protein|Name=transcript:BL96863_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=246bp
EMMAVIESGCHDNVSLIVCAACLDRPPCQSHCDDVMAQCDDILEIFNVTR
QCEDLPNEFSLISDCISRGVCPEGQMECWSPLSNRTDPQCVNASLACDGD
WDCPFGEDEDHCEGFCTSWQFQCDLDFLGGGINSSSVSGRIRSSSPECVD
PWQVCDGVRDCSSGADERDCCSPGETECWNPGGNVTCVVLGLVCDGIRDC
LFGEDEDNCTRGNCTEGEIECWSWNGNATCVNSSLACDGNWDCPFG Run BLAST on NCBI mRNA from alignment at Sc0000007:360052..363049+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96863_cuf1 ID=transcript:BL96863_cuf1|Name=transcript:BL96863_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2998bp|location=Sequence derived from alignment at Sc0000007:360052..363049+ (Branchiostoma lanceolatum)
AAGAGATGATGGCGGTGATAGAGAGGTAAGGCGGTTTTGCAACTGACAAT
AAATTTTAAAAAACTATAAGTATTGCAGTTCTGTTGTAAACCGCTAGACT
ACACTCCAACACCTTCAGATCTATGAATAGTTTTAGACATTGCTCTAGCA
AAATACTTTTTTGCATATGCCTGTACTCTGTTTACTTATAGCTTAATTTT
CTGTTTCTAGCCTGTTCTTTACCAATCAAAGGTCAAATCACTTTCTTTCT
CATTTTGCAAGTTATTACGTAATTAATCCTCTCATATACCTCCCTCTCAG
TGGTTGCCATGACAACGTGTCTCTGATCGTCTGCGCCGCCTGCCTGGACC
GTCCGCCCTGTCAGAGCCACTGTGATGACGTCATGGCGCAGTGTGACGAC
ATCCTGGAGATCTTTAACGTCACCAGGCAGTGCGAAGACCTACCTAACGA
GTTCAGCCTCATCAGTGACTGCATCTCACGTATGTTGATTAACAGTTGTT
CGTCTTTACCATGATGTATCGCATTGGTTGCATTTGCTTCTTTTACTTAA
ATGCCGGTTTTATGAACATGTTTTCTGAAGGAATAATGTTCTCATTCATA
AAGCCAAAGAACTCCACAGCTACTTCCCTAAATAGATCCTACTACTCTTT
GCCGTATTCTTGCCGCATAGCCTAAATAGACTTTTTGCCACATGGCTACG
CTATGGCTAAGCAAGAAATCAATTAGTATCTAACATTCTAGTATCTACTG
TTCCGTTATGTACTGCGCACACATTTGGTCTGACGTTATTAGCGTGGGCG
TTATCTCAAAACTTCATGTGGCTTTTAATAGCGCTCTAAAATTACTGCTC
GGTGTGAGCAGGCAGACAAGCACTAGTTGGTTATTTGCAAACAACAGAAT
CGATTCTTTTGATGCCCGACTTCGAAAAGTATCACATTCTTTTGTCTCCC
GTTTGCTTTGTTCTGAGAATAATATCATACAGACACTCGTTCATTCCGAG
TCATTCTACTACAGCACATTCTGGAGTCATCATGTCAACATTGTTTTTTA
AAGATAGTATAAGTTAGTTCTTTCTCCTTTGTATGTTGTATGATATGGGC
CAGGTGCCTGAATTAAAGTTGAAATGAAATGAAAAACAAATTTGATACCT
CCCCCCTAATTTTATAAGGCGGCGTGTGTCCTGAGGGACAGATGGAGTGC
TGGAGCCCCTTGTCGAACCGGACGGACCCGCAGTGCGTGAACGCCAGCCT
GGCCTGCGATGGCGACTGGGACTGTCCTTTCGGAGAGGACGAGGATCACT
GTGGTACGCATTTCTTTAGTAAACGTTAAATATGAGGAGTACCCATATGA
TAACACACACAAACATCGAAACCAGCAAACACACACGCACACATACATGG
ATGCAAACACACACACACAAACACACACACACACACATACACATAAATAC
ATACACGCATACACACGCAAATATGCACACACACACAGACACACACAAAC
ATACATGCATACATGCCTGAGCATCTACAGACTTAGAAAGATAAAGATTC
AAATGCAGATGCAAATGCAGAAACAGACAACTATAGCCCACTTACGGGAT
AAAAGATTGAATGAGAGAAACATAGCTAAAGTTAAAGCTATTGGTCTGTT
TATACATGTTCATCAGCCTTACCGCGACTTTCATCCGTCTTATACTATCT
CAAGGTTCATACTATTATTGTCTTCATGTTGTTTTTAGAGGGTTTCTGCA
CCTCCTGGCAGTTCCAGTGCGACCTGGACTTCCTGGGGGGCGGAATTAAC
AGTTCCAGCGTGTCCGGGCGTATACGTAGCTCAAGTCCGGAGTGTGTCGA
CCCCTGGCAGGTGTGTGACGGAGTCCGGGACTGTTCGTCGGGGGCGGACG
AGAGGGATTGCTGTTCCCCCGGAGAGACGGAATGTTGGAACCCCGGCGGG
AACGTGACCTGTGTGGTCCTAGGACTGGTCTGTGACGGCATCCGGGACTG
CCTCTTCGGGGAGGACGAGGACAACTGCACCAGAGGTACGTTTATGACAG
GTTTGCGTAGCAGAACCTTTGTTGGATCCGTTGGCATGTATGGTGGCTAC
CATCTTGAATTGTGACGTCACAGGGCCGTCATACCATTTTTTGGAGGTGT
GTTTTTGGGGTAGAGTTCTCTCTATTCTTAACAAATCGGCACACAACTAT
CACACATTCAACTCATATAAAAATTCAATACCAATTCAAATTTATGAAAA
GCCCTTTATACCTTAGACCCCGTAATCGCTAAACTAACATAGCAAAGCTG
AAGTATATGTAGCACAAATACTTAACTCTAGTTTTCTTTGTTTGCATCAA
TTTCTTACAGTATTGATGGTGGTGAAATATTACAAATTTTACAGTACTAT
AAGAAGAAGTATCGTCATCGTTAAGATTCTGCAGGGGATAGATTGGTAGA
AGGAATCCATGATGACCAATTGTGACATGATTACTTCCGTTCTCTTTGCT
TGTATTTCTAACAGTCTCAATAAGGATGATATGTATCTCAACAGCTGGGA
GCAAAAAAATCCTAATTCTAATATAGTTTCAAATGTCTATCGGGGTTGAT
TGTCAAATGATATTATCATATAGATAACAGCTCTGCTTTGAATGTGGATG
TGGTTGTGTATATCTCCAGTAGGCTGATCTGATACTTTGCATCATATAGT
TTTCAAAAAAAAATCAAATTCATTGTCGAATGACGTTGATCACCAGGGAA
ATTTACACTTACCGTTTATTTGCAAATTGTCCGAGGGCTAAAAATATTGA
AAGCGAAGTTAATTCATATGGCTCTGATATGGCTGTGATCCATTTTATTC
AGTTTCTACCTCAGAAACAATTGTTTTTGTGTATGTTTTTTCAGGAAACT
GTACGGAAGGAGAGATCGAGTGTTGGAGCTGGAACGGAAACGCGACCTGC
GTGAACTCCAGTCTGGCCTGCGACGGTAACTGGGACTGTCCTTTCGGA Coding sequence (CDS) from alignment at Sc0000007:360052..363049+ >transcript:BL96863_cuf1 ID=transcript:BL96863_cuf1|Name=transcript:BL96863_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=738bp|location=Sequence derived from alignment at Sc0000007:360052..363049+ (Branchiostoma lanceolatum)
GAGATGATGGCGGTGATAGAGAGTGGTTGCCATGACAACGTGTCTCTGAT
CGTCTGCGCCGCCTGCCTGGACCGTCCGCCCTGTCAGAGCCACTGTGATG
ACGTCATGGCGCAGTGTGACGACATCCTGGAGATCTTTAACGTCACCAGG
CAGTGCGAAGACCTACCTAACGAGTTCAGCCTCATCAGTGACTGCATCTC
ACGCGGCGTGTGTCCTGAGGGACAGATGGAGTGCTGGAGCCCCTTGTCGA
ACCGGACGGACCCGCAGTGCGTGAACGCCAGCCTGGCCTGCGATGGCGAC
TGGGACTGTCCTTTCGGAGAGGACGAGGATCACTGTGAGGGTTTCTGCAC
CTCCTGGCAGTTCCAGTGCGACCTGGACTTCCTGGGGGGCGGAATTAACA
GTTCCAGCGTGTCCGGGCGTATACGTAGCTCAAGTCCGGAGTGTGTCGAC
CCCTGGCAGGTGTGTGACGGAGTCCGGGACTGTTCGTCGGGGGCGGACGA
GAGGGATTGCTGTTCCCCCGGAGAGACGGAATGTTGGAACCCCGGCGGGA
ACGTGACCTGTGTGGTCCTAGGACTGGTCTGTGACGGCATCCGGGACTGC
CTCTTCGGGGAGGACGAGGACAACTGCACCAGAGGAAACTGTACGGAAGG
AGAGATCGAGTGTTGGAGCTGGAACGGAAACGCGACCTGCGTGAACTCCA
GTCTGGCCTGCGACGGTAACTGGGACTGTCCTTTCGGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000007 | genome | Sc0000007:360052..363049 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96863_cuf1 |
| Biotype | protein_coding |
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