transcript:BL96872_cuf12 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96872_cuf12
Unique Nametranscript:BL96872_cuf12
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96872_cuf12

>transcript:BL96872_cuf12-protein ID=transcript:BL96872_cuf12-protein|Name=transcript:BL96872_cuf12|organism=Branchiostoma lanceolatum|type=polypeptide|length=1168bp
DILQQCTRYKTPYGLQLQWNLRYGSGDAASGMDFTVHLKDNVLVKNKKRW
SQVMYMSYTLDYAAYFHPLGMASKVIADTDVRATSTYGNDGSHGPHQARL
NSVGNGSGTGGWTAGESDIHQSLQIYLGEDMVVTGVVTQGKHGCEEWVTT
YHLYYSQDSESWECYRDKHNKPVAFEGNFDSDTPVQHILDTPIRARYVSF
NPVSWKDRISMRVELLGYCATDLDRDSYILATDADIKFSPQSAKALMEIM
STDPSVGAVCARTHPLGSGPMVWYQVFDYAIGHWFQKVANSVLGTVLCCP
GCFSVYRCKAVRDTLATYASTVSKGEEFLTKDMGEDRWLCTLMVEKGWRL
EYTAVSEDSTYCPEEFDEFFNQRRRWIPSTIANQLELIRKWGGGQVKSDY
VSKFFIMYQGFLLFSSMIGPSTVILIMAAGLELVVGSAGGGILPTVIVLS
LIFIGYGVLCLYAKQDTQLKWAKVLTMVFMVVMVIVLIGQAREMVEAFQD
LDDRLKQQNANHISDALKSCLDCENIGCGDCKTLTCEGPLEWSKDNVSTW
LKECFGPDDQFRNISGHFTQYSGLQLSLFDEQTLCDVFAMQNGDPAKERD
CKLIFREFVKVRDENAAVTSPPPPTISDHLPLPMSVIYFLSLAALYLLTA
LLHPSEFHKLLYGFVYLLSLPSGYILMTIYSVCNMTDRSWGTREIKVPGV
AVGGKSVIEVISNLCRTLCSCCRREDTKQPSVEEISNYDVDDQGTVGSES
GSEDEQSENQSLPGDVKPAPANKSSLWGGSGKGSVRGHRPSIHGTLRGHH
RMFARRVSQQLIHDVSDFLPSQWPAELRQKYEKKFREHGYENTSFIFGMT
NKDLEAIGITKKLHQNVLMKEIKKLPESELDDTIPENCRQWLESIGMEEY
INSFETYGIISKDHLASLKSTDVDDLLNELKITKMAHIKRIANAIKKMKS
PEETGRRIHLVKSIMKKVKTITMQHDSTRSLEFKFWDKLRQECLDPEIAL
FSTDTDIRTQLVQLRNSWIRVLLVLNVMWITLIVSLTYVEQLRVLGNNPL
SLLSLLVFGVLQLLQFLTMVYHRMRTLLHYLARLPYPASFTMRTKGTGSG
RADVIEIESPDPDADLSPGAYRRPSLFALPPPTLAAGRARRPSLFGLLRH
EQPQHWPGARTNPVYEED
Run BLAST on NCBI

mRNA from alignment at Sc0000007:689503..705437+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96872_cuf12 ID=transcript:BL96872_cuf12|Name=transcript:BL96872_cuf12|organism=Branchiostoma lanceolatum|type=mRNA|length=15935bp|location=Sequence derived from alignment at Sc0000007:689503..705437+ (Branchiostoma lanceolatum)
AAGACATCTTGCAGCAGTGCACCCGGTACAAGACGCCTTACGGGCTGCAG CTCCAGTGGAACCTGCGCTACGGGAGCGGAGACGCCGCCAGCGGGATGGA CTTCACGGTTCACCTGAAGGACAACGTGCTGGTGAGTCTTCAGGTGTTAC CATAACATCTGAGCTCTGGCAACAGAAGTCTTTGGATCTGGAAGATGATC CATCCACAAATTTTTGCTGTGTAGCTTTCAAAATGAAGTAGCAGGGTGTC AAGTAGCTCCTACTCCCTTTTTTATCACCTTCGTTCCTACGGTGTACCCG CTTGTTTTCTGACCCTGACATGTCATCCCAACATATTTCCTGTACATTCA GGTGAAGAACAAGAAAAGGTGGAGTCAAGTGATGTACATGTCTTATACCC TGGATTACGCAGGTAAGCATATGCATGAACGGCAGCAGCAAACTTTCAAG TATACATTCTTTCACTCTGACTTAGATTAGGTATTGTATTATAATGTATT CATGTGTTTAGCTCTGTTTGTTTGTTTCCTTGTTTTCAAATATGTGATGT AATGTTATGGGCCTCTGTGCCTAAAATACTATATCATTAAATAAATATTG TCAGTGGGAAAAAACAACAGATAGCTATAGTCACATTTGAAATTACCACA AATATAAGTTTACTTGTTTACTTTCAGCGTATTTCCACCCCCTCGGCATG GCGTCCAAAGTAATCGCGGATACGGACGTCCGCGCTACGTCAACCTACGG TAACGATGGGTCTCACGGGCCGCACCAGGCCAGGCTGAACTCCGTGGGGA ACGGGAGTGGCACGGGCGGCTGGACGGCGGGGGAGTCCGACATACACCAG GTAAACTAGATTTTTACCATCTCAACATCCGCATCTTCCTTACATCAAAA GCTATCTGCCACCGCAGATCGAGCTCATAGAACGTCCAGGACAAAAGATA CAAAAGTTGAAGTTCTGATGCAGTACCAAGGTTACACACCAGGGGGCTAG ACCTTTGTCGTCCCAAGACACACCACCATACCAAAAACCATCACAATCTA TCCAGAGGTTCTTAGAATATGCTGACTACGAATATCCGGAAACACAAGCA GACAGACAGAAACACATGTATACACAAACACGTAGAGAGACACCCAAAAC AATACTTCTATTTTTCATGGTGGCGATTCCCTTTTAATTCCCCTTTCTCA GTCGTTGCAGATCTACCTGGGAGAAGACATGGTAGTGACGGGAGTTGTGA CGCAGGGGAAGCATGGGTGTGAGGAGTGGGTGACCACGTACCACCTATAC TACAGTCAGGACAGCGAGTCATGGGAGTGCTACAGGGACAAACATAACAA ACCTGTGGTAATTTGTTTTGCAATATGTTCAGTAGAAATTCTTTAGTGCT TATACCCCCGCCCTCACCAAATTCCGTTTCTTTTAGCCTTTGTTTATTCA TTAAAAACTCAAATCGGTCTGCAGGCCGCTTTGCAATGGTTTCATAAAGT AAGTGGTAAGGGTCAGGTACCTAAACGTAACATCAGGTACAGGTACAGGT ACAGGTTTAGGTACAGGTCCGGGCCTGTACCTGTACCTGAACAATTTGAA AAATTAACATGTGTTCTTCTGAACTTGTTCAATAAATGAATAATGACATT ATCTTTATTCAAAGAACATAACTAGGTTTCCTACCGCCAAACTCCCTTGG CCTTGCTATCAAAACTCTCGGACCAGCCTGAAGGATCTGTTTTATATTAG TTACACATGTCCCAAGGTGTCACTTTGGTCATGTTTCGTGTCGCATGAGG TCATGAGGTTAGGAGATCAGTCACAAAATAAGCATGGACTTGGTGTAAAT TTATATCGGTACAGTACCGGTACTTCATGATCCGGTATTTTGGATCTGTA CCGAATAGATTTTCACGGTACAGTACCGGTACGCAGTACCGGTACGCAGC ACTGATAAACATACATCCTCTAAACACATGGTATGGAAAAGTAAGTAAAG CTATACAATTAATCATCGAGCGGAATCTAGCTGGAAAAAGATAGTTTCGA GTGTATCACGTGGAACACTTGTCTCACTGAATGATGCAGTGATATTATAC CAAGTAGGTTCTCCAAGTAGGGGACTGTCGTATATACAATATACAGCGTT ATCATTGCGAGTATCAGGGACCTCACATTCTGACCTTTCACCTGTACCTT TCCGGAGGTCAATCATTTTGCGGGCTTTATTTTTTGTTTTTCTTGTGCAA GAAGTCTGGAAGCGTCTGTTTTTTCAAGGCAAAGTCTCTTATACGTGTGA TCTAGAGAATAGTTGCATCAAATTATCGTCCTGTGCTAAGTCGAAATTTG AAATACCTGTATCTGACAGCGACGTTATTTGGACTTTCAGGTATATGATT CATGACCTCTTTAGATTGACCTTTGTGTAGAAGTTTTGCTCCCTGAAATA ACTCGGCTGCTTTGACACATATTTGAGGGTTTACAAAGCCATAGAAAATA TGTAGGAGAACCCAATTGTCCCAGATAGTCCGCAGAACCAAGAATTTCTT CAGGTTAGGCTATATTTCCTCCGTAGTGTTACCTAGCAAAGTGAAAAGGG GAGGGGCGATAAACCGTGAAGGTCACAAAGGGTCAAATCTTGTTATCCCT GATATTACAAATAACGTCGCTGTATGATAGAAGTGGGACATGGCTTCATT TGATCATGAATCCACCATTAGCTTCACAATTAACCCAGAAAGAGCAGAGA GAAACAAATCCAGATAATTTCCAACGTTCAATAGTTGTTTGTGTCCTGTT TTTTTTCGGTTTCGAGTGTGTCTTATAACGTTATGTAAACACAAGCGGCG AGTAGCACAGTCTCCTGGCTCCTGGGGATCGAACCCGGCCAGCGCACAAA GCACACACACTAACCGCTAGACTAAAAGGTTCGAACCAGTTAGACCGGTC ACAACGACTGGACTGGTCAGTTAGTTATGCTTGAACCCCACTGTTACATA TGCATTGTGATATTCAGGGACCTCACCATTGAGTTAAATCCTCATATAAA TATATACGTATCAAGGGTCTTACCTCTTTTGAACCGTTCCAGGCATTAGA CAATCAGTCGGAAGAATCTTACCTCAAATACAGCTTTTGATATAATAATG ACAAACGCCAGGGATCTCACCTTTAACCTGTTCCAGGCATTCGAAGGCAA CTTTGACAGCGACACCCCCGTGCAGCACATCCTGGACACCCCGATCAGAG CGCGGTACGTCAGCTTCAACCCTGTCAGCTGGAAGGACAGGATCAGCATG AGGGTGGAACTGCTCGGGTATTGTGCAACGGGTACGTGCTAGACGCTATC ACCATTCACTTCCAGTCTTTTTCATCATCATAAGACTTCACCAAGTATGC TTAAAATGTATGTCCATACTAAACGAAACTTTTTGTGTGCTTCGACTGAT TTTCTTAACCGGAAAGAGAAATAGAGACAAAATCAATCCATGCAATACTG TTGATAATTAAAAAAAGTAACATTTGACCAAAGACAAAAGAGATGGGTCA GTCATCAAACAAGGATTCGGCAAGCTGTTTTTGAGTGGGACCAAGAGTTA AACTTTTAACATGGTTCTGGACAACCTGCATGGTTTTTCATCAATGTCCC AAACAAACATTCAAACGAAAAAACAAACAAGCCTATCTTACTGTACAAGC TTTCTCCACAGACGTTAATTAAAGTACATTTCATCTTTCCTTTCAGACCT AGACCGAGACAGCTACATCCTGGCAACAGACGCGGACATCAAGTTCTCCC CGCAGTCTGCCAAGGCTCTGATGGAGATAATGAGCACGGACCCTAGTGTC GGCGCCGTGTGCGCGCGGACTCATCCCCTGGGGTCGGGACCCATGGTCTG GTACCAGGTGTTCGACTATGCGATTGGGCACTGGTTCCAAAAGGTTAGGA AAATAAGAACCTGTACTCAAGCGTACAAATGGTATACTCTTTTAAGTGCG CTAAAATTAGACGTTTGAGTTCGATAGAAGAACCGAACGTNGCCAAGGCT CTGATGGAGATAATGAGCACGGACCCTAGTGTCGGCGCAGTGTGCGCCCG GACTCATCCCCTGGGGTCGGGACCCATGGTCTGGTACCAGGTGTTCGACT ATGCGATTGGGCACTGGTTCCAAAAGGTTAGGAAAATAAGAACCTGTACT CAAGCGTACAAATGGTATACTCTTTTAAGTGCGCTAAAATTAGACGTTTG AGTTCGATAGAAGAACCGAACGTTCGGGCTCGATGGAAGAATCGAACGTT CGGCTGCGACGGAAGAATAGAACGTTCGAGCTCGGTAGAAGAATCGAACG TTCAAGCTCGGCGGAAACATTGAATGCTTGAGGTCGATGCGCGTGCTATT AGATAAATAGACATATGCTGGTTGTTGCCCTAAGTTGTATACTGTGGAAG CCCACTTTAGGAAGATCCACTTGTTTTTAAGAAATATACTTTATGTATAT GTAACTTCATTATTTTTCAGTCCCTCATGCTGACGATCTGGCACACAGCG AGAATCAGCGATGATGTTTTTGTGTATAAAAACTTTTGATTTTTACTCCC CAGGTTGCCAACAGTGTTCTGGGCACGGTGCTGTGCTGTCCAGGCTGCTT CAGTGTGTACAGGTGTAAGGCTGTCAGGGACACTCTGGCCACGTACGCCT CTACAGTCAGCAAAGGGGAGGAGTTCCTCACGAAAGATATGGGGGAGGAC CGCTGGCTGTGTACGCTCATGGTAAGACATTTGTTTAGTTTTTCTTCACA TTATACGGTCAAACCTGCCCAAGAGGACCACTCAGGGGACTGATAAGATC TAATTTATGTGGACAGGTGGTCACTATTGGAGGGGTTCCTAAATGCTTGG TTCAAAGGGTACACTTTAAGTTATCCAAAAGACCACCAACAAATGGTCCC ATTGGTTAGGGGGTGCTTTTCTGGGTGTGGTCACTTGTATCTGTAGGTTT GGTTGTATAAACATTATATTCTTGACTTACTTTTAGCAAGGTGTAGGTCT TTGTCTTACAGACATTCAAGTCAGATCCGCATCGCATTAGAATGGCTTGA TTTTGAGATGTCTGGATTTATTACGTCTGGATTTATTAATATAATAGTAA ATCATAGTATGGACCATATCACAAATTGCTTCTAAACAAAGCTTGTAGTT AGCCATAAGAGGCTTTAGTATGTCGACATTATGTATGACCAAGAAAACAC ATACGATTCACAGACGAATGTTATCTGATTCTCCAGGTAGAGAAGGGCTG GCGGCTGGAGTACACGGCTGTGTCCGAGGACAGCACCTACTGCCCGGAGG AGTTTGACGAGTTCTTCAACCAGAGGCGGCGGTGGATCCCCTCAACTATC GCCAATCAGCTGGAACTCATCAGGAAGTGGGGAGGGGGGCAAGTCAAGAG CGACTACGTCTCCAAGTTCTTCATTATGTATCAGGGCTTCCTGCTGTTTT CATCCATGATTGGACCATCGACGGTTATCCTGATCATGGCTGGTAGGAAA GCTTCCTTGTTGAAATTTAAGATTAGACCTGATCATGGCTGGTAAGGAGG GTTTCGTATTGTTTGTGTTCAAAGTCAGACATTCTACTACAAATGCCAAA ATGTCTTGATGGTCCTCATGTCAACACATCGTCATTAAAAGTTGTCATTA AAAATCCAGCACTAAAAATATGAACGGATCTTTGATAGATATTCTGAGTT ATCATCTCTGAAGGCTACCTTTATCCTCATTGAAATAAGCATTTTAGTTT GAATTATTTGATAGGGAAAGTCTTAGATTTGTGCCAGATAACCATCGAGA TATACTTTTTTTATCTATCTTTTTAAACATATGTTGGTGATCAAAATATG TATATCGGATATCTGTGGGCCATAATTCCGTAGGTGTAGGTCAATCTATT GACAGTTGATCAGAAGAAATGTTATAATGATTTTTATTGTCCTCATCATT CAGCCGGCCTGGAGTTGGTGGTTGGCAGTGCCGGAGGAGGAATCCTGCCG ACAGTTATTGTGTTATCTCTGATCTTCATCGGGTACGGAGTGCTGTGCCT TTACGCCAAGCAAGACACACAACTCAAGGTATTTTTCAATGAAAACATCT TGTCATCATACTGATAGTAACTCATCATGGCTATGACCTTAATTATGCCT TGTACTCTTATATTACTTTCAATAAAGTTTTGTGATACCTTCTCAATCCT CTTGCAGTGGGTGAATGTAATTTCCCTGGTATCGATGGTAAAGGTAGTTA TACCACTGCACGAAATGGCCTCGTATCCCGGCGTATACGTACAGGGATTC CTCCGGAAATATTCCATATCCTAAATCCGCACCGGGATATGGAATATTTC CGGAGGAATCCCTGTACGTATACGCCGGGATACGAGGCCATTTCGTGCAG TGTACCCTTAGGCATACATGACTTCGGAAGTAGGACAAATAGATATCGAT GTATTATGTACATGTCTAATCTTCGCCAACGTATGGTCTTATCCATCCTG TTGCAGTGGGCGAAGGTCCTGACCATGGTGTTTATGGTAGTGATGATGAT GCCAAAAGAAATGATAATATATTATGGGCATGGATGTCTAATGTTCATGG ATAAACATGATTTTTACCATCATGTTGCAGTGGGCGAAGGTCCTGACCAT GGTGTTCATGGTAGTGATGATGCTGCCAAAATGATAATGTATTATGGACA TGGATGTCTAATGTTCATGGATAAACATGATCTTTACCATCATGTTGCAG TGGGCGAAGGTTCTGACGATGGTGTTTATGGTAGTCATGGTGATCGTGCT GATTGGGCAGGCGCGCGAGATGGTGGAGGCCTTCCAGGACCTCGACGACA GGCTAAAACAGCAGAACGCCAACCACATCTCGGACGCTTTGAAAAGTACG TTCAGATGTAGTCATGTCTTAGCCAAATATTCTCACACATCTAATTAAAC TTTGCACGTTATACAACGGTTGTCCAATGAAGTTCATTCATAGATCGCAC TTATAAACGCTGTGTGATATGTTAGCAGTTGAAGTTCAACTTTGATTCAG AATGTAGTCGATGTTGTTTCACATGTAAAACAAACAAACAAATAAACAAA TAAACAAACAAACAAATAAACATGTCTATTTCTTTTCCCACAGGTTGTCT TGACTGTGAAAATATTGGCTGTGGTGACTGCAAAACGTTGACCTGCGAGG GACCTCTCGAATGGTCAAAGGATAACGTTTCGACATGGTTGAAGGAGTGT TTTGGGCCAGATGACCAGTTTCGTAACATATCCGGCCACTTCACACAATA CAGGTGAACAAAAAATGCTAAATATATCAATATGATTACGACATGTACAA TATGCTCAAAAGTGGCAGCAAACAGGTTGTTTTAACATTTACAAAGTGTT AAAATCCGCTAACACAAAAATTAAACAATTGAAATATGATAGTCACAGTA CAATTCTCACATCGACCTTAAAACAATTGTCTCTGAGCGAAATCATTTTT AGAACTCAAAGGTGGTCATTACATTGACGTACATAATTAGCAGGCAGGGA AAATCGTTTCGCTGTTTTGGGGGAAGTTATTCCTCTCATGCTCAATTTAT TCCTTTATTTTTAACGTGAATCATGATTATCAACTTTTAATCCATCTAAA ATCACGTGAATATGTGTCACACACTGTTTTCAATCCTTAGTGGTCTCCAG CTGTCTCTGTTTGACGAACAGACGCTCTGTGACGTGTTCGCGATGCAAAA CGGAGACCCTGCCAAGGAGAGGGACTGTAAGCTCATATTCAGAGAGTTCG TCAAGGTCAGAGATGAAAACGGTAAACTGTTTAAAAAAAATTGTTTTCAT TTGTTATACATGAGGAACTGTGCGGACCAGAATTCGTGTCTAGTATTTCG CTATGGCCATGAAAGACTAGAAAGACACTCATCAGTGTTTTCTTATAACC CAAAGACAAATACACTGACAAACCTGCAGTGCTTCCACAGCATACATATC CCAGTTGCTCTGGACGCAGCAAACCTCCCCAAACGAGAGGCTTTTTTTGT ATTAAAGAAAATGGTTTTATTTCTTGTTGAAACCTGGAACTGATGATTGC CACGAGTACACAGCATTGAATTAAGACAAACGATAAGAGGGCTTGTTTGA CACATATATGTAGAGATGACATTTACCCTCTTCTTTTCTACTGCCAAGCC CGATAGTAATTAGATTATCGGCAGTCTGCACATAAGTTAATAACAAGAAA GGTGACCGGTACAAGTAAACTAGGGGAAAATAGCTAAGGGCGCTAATCAT CAGACATCAGATGATGTATAGTTTGTTTGTTGCTTCTGCAGCTGCGGTAA CAAGCCCACCGCCGCCCACGATCTCAGACCATCTGCCCCTGCCGATGAGC GTGATCTACTTCCTCAGCCTGGCGGCTCTGTACCTCCTCACGGCCCTGCT GCACCCGTCAGAGTTCCACAAACTACTGTACGGGTTCGTGTACCTGCTGA GTTTGCCGTCTGGATACATCCTGATGACCATCTACAGCGTTTGTAACATG ACGGACAGGTCCTGGGGTAAATAAGGATATATCATGAGTGGAACCTATTT CATGTAACAATTACTCATTAACAAGGAACTGTCAGACGTTTATGGTAGCA TCCACTACCTCTAGCCAGCATTTTCCGCGCATTGATAAAACTGTTTACAT GTTCAAATCATTTAAGTTGTTTGTAACTGCTATTTTGCATATTTTATTTT ATTTTAATTTCTAACCTTCCTCGAGACTTTTTAACAGGCTGCAAACGTTT TGGGTTCGGGTTTGATGGAAGAATCGAACGTTCGGTTTCGATGGAAGAAT CGAACGTTCGAGCTCGGTGGAAGAATCGAACGTTCGAGCCCGTTGGAAAC ATTAAATGCTTGAGCTCGATGGATACGTCTTATAATCAGCAACGGGTAGC TCTAAGTAGTGTGCATTTTCCTTGGATTAAGATAACTGTTTTTCAGTTTT GCCTTTCATAGCCCGTTTTTTGTTTTCTTTGCAGGTACACGAGAAATAAA AGTACCAGGTGTGGCCGTTGGAGGTAAAAGTGTCATCGAGGTGATCTCCA ACTTATGCAGAACTTTGTGCAGGTCAGTGTTGTAGAGACGAGAAAATGCT TTAATTTGTAAGTGTCAGAAGTTAAACAGTAATCCTGTTACTTGAACAAT GTTGACTGGTGGCAAATAAAAGTTGACATTTTAAAGGAGGCTATGGTTTT TCTGTGTCAGAATACAAGTTGTTCTGGTTTTTACTTGGTTTTGTTGTGCC CCATGTATGTCCATCTTCCGTATATCTATTTGAATGTGTAATTTCCTTTT CGAAATTCAATAAAGGGGGAAAACCAACAAACAAACAGTAATCCTTAGTT GAAACATTTTAACTTCCTTACAAAGCTGTTGCCGGCGAGAAGATACTAAG CAGCCGTCAGTGGAGGAGATTTCCAACTATGACGTTGACGATCAGGGAAC TGTCGGGAGCGAGAGTGGATCAGAAGACGAGCAGAGTGAGAACCAATCGC TGCCAGGTAAGAATTGTCATAACTTTGCTACATGAAATTCACATGTTCTT GAGGCTTGATTTTGGTCCTTGGCCATTTAGTGACGGAAGAGAAGGATTTG AGTTTGTGATGTCCTCAAGCATTTGGGCACACTATCCTTTCTCGATAAGT GTACAGAAGTTTGACGTCGAATGAAGGGCCCAATGCACAGGAAGAAAGAC TTAACGCCACCTTCTAGACCACCCAATTTGACGACCTGATCGACATTGCG CGTTGTGCTACGTTGTACCTTTTCCGTCATGATATTGATGCATATTCTTG TGAATCTAATATCTATAACATTCATATTAAATCATTGTTTCTGTTAATTC TAACAAAGGCGACGTGAAACCAGCTCCTGCAAACAAGAGCAGTCTGTGGG GCGGGTCAGGTAAAGGCTCGGTCCGTGGGCACCGGCCATCGATACACGGG ACACTGCGGGGGCACCACCGTATGTTCGCCAGAAGGGTCAGCCAGCAGTT GATACATGACGTAAGCGACTTTCTCCCAAGCCAATGGCCGGCAGAACTAA GGGTAAGGTCAACATATGAATAGCAAATGATAAAGAATGAATAATGAAAA ATGAACAATAAACACAAAATAGATAATGAATAATATAAATAGTATAGATA GTATCAGTAATATAATTGATATGGATAATGTAAATAACATAAGCGATATA AATGATACAAAAATATACATGATATAATCGATATGTACTTAATTCTCCCA TATTTACAGATCTACTTGTATCTTCTTGAAATTTCTGATACTGTAACAGT TATATCTTTATGTATATTGTTCTAATATTGTTGTGCTATTGACGATGTTG AATATTCTTAACGTTGGACTTTACCATCTTCGTTTCAGCAAAAGTATGAG AAAAAGTTCAGGGAGCACGGTTACGAGAACACGTCGTTCATTTTTGGGAT GACCAACAAGGTTGGTGAACCGATACTAGATCTATTATAATTAACTTCAA CATGTTGTCTTGGGGTTAATGCGTCTCTATCAATATAATCACTCCTGTTG AAAACCCCAGTGTTTGTTAGATACCAGATGTAGTTTACTGTGAAGTGTGG ACTGTTGTTTGAAGAAAAGAAATTCAGGATAAACTCCAATGTAAAAAGTT AGAATTTATAGTTTTTTAAAGGTGACGTATTTTCTTGTGAATGACCTATG CATTTAGTTACACTCTGTGTACGTGTTTATCGTATAAGCTGTAATAAATA CCGGCAACAATTGTAATAATTGTAACTGTGGCTGTCATACATGATTTTAT TACGTGATATCTTTATTATGAAATAAACCAGTACACAAAATCCACTAACC TCTTATTTCATCTTCATGCACTAGGATCTTGAGGCTATTGGCATTACCAA AAAGCTGCATCAAAACGTTCTCATGAAGGAAATAAAAAAACTCCCGGAGT CTGAGCTGGATGACACCATCCCGGTAAGATGATTTTCAGTTCAAACCCAT TTTTACAGTATCGGACATANTTTTACAGAATCGGACATACACGCATCGTT GAACGACCTGGAGATAAAGTTGTACAGAATGAACGAATGTCCAAATATGG TCTAGAAGATGTTTTTTGGAAACGTATATTCTCAGCATAATCTCAAGGAT ATTGCCGTGTATACGTCAGGGTATTAATCTACCGGTAGAGATAGCGATTG GAGCTTTTTGTCATCAAAGATCTTGATCAGGATATCTGCGCAATCGACAA TCGGTGATTCTAAGTGACTATGTGTAATCATCGATTCAAACAATGTTTAC CCCGATCGGAGTTTCTGTCGACAGAGATTGCGTTCACGATTCTTTTGGTA GAATACTTAGTAAGTAGCTGATTCGGCCAAATCGTCATCTCTGAACTTAC ATCTAAATCTATGAAGTGTATCTCGTTGACTTAAATCAGTTTTGTTTATT TGCCGCAGGAAAACTGTCGGCAGTGGCTAGAGTCTATCGGCATGGAAGAG TACATCAACAGTTTCGAAACGTACGGAATCATCTCGAAGGATCACCTGGC CAGTCTCAAGTCCACGGACGTGGATGATCTGCTGAACGAGCTGAAGATAA CAAAAATGGGTATGTTGTCAGCTGTGTAACCAATAGGAATTAAGCATCTA ATTGGCCTGACTATATGACGATTAGCTTTAATGATCTAATGTGTAATCGT ATTAAACTTCAATTACAGATGATATCAAGATAATAAGTGTTCTTTCCTTG GCTGTATGATTGAAAGCAAACGTATTTCATTGCGTTTTTTTATACTAACA GTAATACCTTACATCTTGCATTTTTATTGTTTTTCTTCCCAGCTCATATC AAGAGGATTGCCAACGCTATCAAGAAGATGAAGAGTCCAGAAGAAAGTAT GTACTGTTTCTCTTTGAACCTGATATTGATAAAGCTATTATAACTAATTT ATTGGCTCATTAGTACCGCGTTTGTCTATTTTCTACGCACCTTTTTCAAT AATAGATATCTTGTCGACGATGTTTAGCAAATGTTGATCCAGTTATCTGA CATTGGTGAAGATGCACCGTGCATATATGCGGAGTTACAAACAATGTAGT TAATGGGAATAGGTTTGGGATTTTTTGATTTCGTGCAATTAACAGAAATG TGCGTTAATCCGATGTGTATTCAACTGGCTTCTACTGTAAATGCTTTTCA TAATGTATTCCGTAATTATCTCTTGACAGATTACTTTCATGGCAGCTGTC TTTTTTCTTTTACTATTCTTCGTTTGACATGTTTCTCTTCATCGAATCCT TATATCTTAAGCTGGCCGAAGAATACACCTTGTCAAGAGCATCATGAAGA AGGTGAAGACGATCACCATGCAACACGACAGCACGAGGTCACTTGAGTTC AAGTTCTGGGACAAGTTACGTCAGGAGTGCCTGGACCCGGAGATCGCCCT CTTCAGTACTGATACAGACATCAGGTAACTGGACAGACAAAACTACACTG CACCAAATGGCTTCGGATCTCGGCGGATACGTACAGGGATTCTTCCGGAA ATATTCCAAAGTTACGTTGGATCCGCCTGTATCCGTCAGTATCCGTCCGT AACCGCCAAAAATACGGAAAAATCCCTGTACGTATCGGTCGGGATCCGAA GCCATTTCGTGCAGTGCTAGCGCTAATGCATCTTTTATCTATGTTTTTTT TCTTTGATAGACATACAGCCAAGCCAGGGCAACCCAACTGGCCAAAGCCT ATTACAATGTCTCAGGACAACATAGAATGTGGTACTAAGATATTTGGCAC CAACCGAATAGATTTTGTATACAACTTAACTTATCCCTGATCGTCCAAAT TCTACCTATCTATCAAAGATCCTTATTTTGACCTATATTATGATTGCAGA ACGCAGCTCGTGCAGTTGCGTAACTCGTGGATCCGGGTCCTGCTGGTGCT GAACGTGATGTGGATCACACTGATCGTGTCTCTGACGTACGTGGAGCAAC TCAGAGTGTTGGGCAACAACCCCCTCAGTCTGCTGTCTCTGCTGGTGTTC GGCGTTTTGCAGGTAAGCCCCACCCCCCTCTCACTGGACCCGCGGCACGC TGGCGGCGTCGCTGCGTCCTAAACTGGATTTGTGTTACCTTGACTTTATA ATGGGGATATCATTCAAAACGTACAAGTATGACCAAAAAGACAACAAAGC ACACAAAGCTTAAAAAGATTGTTTTTTTGTCGATGAATTCCGTTGAGTAC TTTGTCAATTCGATTAGCCGCAGCGACGCCGCCAGTGTGCCGCGGGTCCA GTGAGAGAGGGACTTCAGGAGTTCTGTACTACTCTTTTTAGGGTGTGATG TACAGTTGTAACCTCAGAAGCTTAAGCGCCCTCTAGAAGTATGAGCAGAA ACTGCACTGCAGAAACAGGCACAGAAAAAAATCGTTCACCTCGTTGGGTT GAAATGATTGCTAATTCGGAATATAGCTGCCTGTTACGACAAATATCTTG CAATATTGTATACACAGACACTAGTACATACAGAGAGGCAAATTAGGAGA CATGTATATATAGAGAAAGACAGATAGAAACATACATACTGACAGACAAA CAGACAGACAGAGAATGGCGGACGTCAAAAATATTGCTTCATCCCACGGT AAAAGAGTAACAAAAATCACGTTATTTGTAACTAGCTTTTTGTTTAAAAA GTAAAATATCTTAATTGATTTTATTAAACTTGTGTCATTCAAACATTACC TTGCTACATTTTCAGTTGCTTCAGTTCCTGACGATGGTCTATCACCGGAT GCGGACTCTACTGCACTACCTGGCGCGGCTGCCTTACCCAGCATCCTTCA CGATGCGCACCAAAGGAACCGGAAGTGGCAGGGCTGACGTCATAGAGATC GAATCTCCTGGTCAGATATTTTTCTGTTATTAAACTTAATTTTTGGGGCA TTCTTGTTACGCTTTAATCGTTACTTATATGCCAAAGAATCCTTCTTTTT GTACATTTCTTGACAACATATAACAACCATGTAATATTCATCGCACACAT TACTTGCTTCACTCTCACATGCTATCCTCGGAATTCTGATTTCATCAACA GCAACATTCATTTTCTTTATACCTGTGGAATATATTTGGAGCCTGGCGCA TTACGGAAACTCGCTTTCACATACATACAAACAGACAGACAGACAGACAG ACAGACGGACTGAAAACATTAGCTCCATTTCACAGAGATTAAATAGTAAT GATGAATTGGTATTTCATTACTAATCTTAATAACTATGTAGCAGCAGTAT AAGGAGTCTTTATTGTAACAAGTTTATTTTTCTTTTACAGATCCCGATGC TGACTTGTCGCCAGGAGCATATCGTCGGCCGTCCTTATTTGCGTTACCTC CACCAACTTTAGCTGCAGGACGTGCACGTCGACCTTCCTTATTTGGACTG CTCAGACATGAACAACCGCAACACTGGCCAGGGGCGCGGACAAACCCGGT TTATGAGGAGGATTAAAGGAAACAAACAATATAAGGGCCCGAAAATAGGA TTTGAAAGTCAATTTATTCAATCATTTCCATACATGATTAGTTAGAAAAA TACTATCATAATGTAAAGCAACGTCCGTCATACGACGTCCTTGTGATGTG AAACCTCACTTATAATCGTCGCCAGGGTTTTTGTAGGCTCGAGAAACTAA GGGAATCATCTTACGGCACGCTATTGCGCGGTTTTGAAATACGCAAATGT GCTAAATAGTGATAGAAAATGTCACTACCATAGAGATTATAGCATTTTTT TATTTCCATATTTTGGGCCTTAATATTGCTTTGGTTGCCTTTAAGGAAGC CAGCAGTTCCACTGTAGTACCGGTGGGAGCTGCTAAGAGGCCAAAATCTA ATAATTGTCTTTAATTTTGCAATGCGTCACTACATATACATAACACATAT CATAATAATCGGTTTATGTAACCGCTGATGTACAGGACACGGTTTTGTTT TTAACCCGAAGAGTGTTACATATATATCAAGAAATATCCTCCAGATCAAT TTTGTGTGTACGTGTCGTCTGGGGTGATATCTTCTACCTCTATTTTATGT TTTCTGAGGTTTGCTGCTGCTTATTATCTGATAATTTTCTGTTTTATGCT GCTTTTGTGCAATCCGACAATTTTGTTGTTTCTGTTGCTTTTGTGCAATC CGACAATATTGTTGTTTATGTTGCTTGCTTTAAAGCTAATGGTTTTGTAC TCAATGTCACTTATATTAAATCTGATCATTTTGCTTATTGTGTTGCATAA TAGTATGTTAAATCGGATAACTTTATGCTTTATTTTACTAATTTCAAATC TGATAATTTTCATAAAATGTTTGCCCTGAACATTAAAGGTCATTGTTTTC TACATTCATTCAGTGCAAAAAATATCATACAGCACTTTTGGGTACTCTTG TAGTATTTTAATGCATAAAAGTTGAAAAAGTACATACAATACAAAGTTGA TATTACTAATAGTATAAGGCACTTGTCAGCCTCAAGTGCAAGGCACAATA ACATGACCTTAGATTAATCAATGCTTTTTTAGGTATTATACAGAGGCCGA TTCCACGGATAAACATTTGCCGATATGTAAACCTGAAGTTATATATTCAG AAATTAGCGAAAACTTCATATTTCTCAGTTTCTCTTACCGGCAATATCAA ATAAATACGAATTACTCTTTGTGTCTGCACAGCACGACAAGGGTGTCTCT CCATTTTTTTCTCAATCGTCTTTGTAGCCATGCATGATACCTTCAAATAA TCTTCAATGTAAGTACTTCTAATACAAAGGACCGG

Coding sequence (CDS) from alignment at Sc0000007:689503..705437+

>transcript:BL96872_cuf12 ID=transcript:BL96872_cuf12|Name=transcript:BL96872_cuf12|organism=Branchiostoma lanceolatum|type=CDS|length=3507bp|location=Sequence derived from alignment at Sc0000007:689503..705437+ (Branchiostoma lanceolatum)
GACATCTTGCAGCAGTGCACCCGGTACAAGACGCCTTACGGGCTGCAGCT
CCAGTGGAACCTGCGCTACGGGAGCGGAGACGCCGCCAGCGGGATGGACT
TCACGGTTCACCTGAAGGACAACGTGCTGGTGAAGAACAAGAAAAGGTGG
AGTCAAGTGATGTACATGTCTTATACCCTGGATTACGCAGCGTATTTCCA
CCCCCTCGGCATGGCGTCCAAAGTAATCGCGGATACGGACGTCCGCGCTA
CGTCAACCTACGGTAACGATGGGTCTCACGGGCCGCACCAGGCCAGGCTG
AACTCCGTGGGGAACGGGAGTGGCACGGGCGGCTGGACGGCGGGGGAGTC
CGACATACACCAGTCGTTGCAGATCTACCTGGGAGAAGACATGGTAGTGA
CGGGAGTTGTGACGCAGGGGAAGCATGGGTGTGAGGAGTGGGTGACCACG
TACCACCTATACTACAGTCAGGACAGCGAGTCATGGGAGTGCTACAGGGA
CAAACATAACAAACCTGTGGCATTCGAAGGCAACTTTGACAGCGACACCC
CCGTGCAGCACATCCTGGACACCCCGATCAGAGCGCGGTACGTCAGCTTC
AACCCTGTCAGCTGGAAGGACAGGATCAGCATGAGGGTGGAACTGCTCGG
GTATTGTGCAACGGACCTAGACCGAGACAGCTACATCCTGGCAACAGACG
CGGACATCAAGTTCTCCCCGCAGTCTGCCAAGGCTCTGATGGAGATAATG
AGCACGGACCCTAGTGTCGGCGCAGTGTGCGCCCGGACTCATCCCCTGGG
GTCGGGACCCATGGTCTGGTACCAGGTGTTCGACTATGCGATTGGGCACT
GGTTCCAAAAGGTTGCCAACAGTGTTCTGGGCACGGTGCTGTGCTGTCCA
GGCTGCTTCAGTGTGTACAGGTGTAAGGCTGTCAGGGACACTCTGGCCAC
GTACGCCTCTACAGTCAGCAAAGGGGAGGAGTTCCTCACGAAAGATATGG
GGGAGGACCGCTGGCTGTGTACGCTCATGGTAGAGAAGGGCTGGCGGCTG
GAGTACACGGCTGTGTCCGAGGACAGCACCTACTGCCCGGAGGAGTTTGA
CGAGTTCTTCAACCAGAGGCGGCGGTGGATCCCCTCAACTATCGCCAATC
AGCTGGAACTCATCAGGAAGTGGGGAGGGGGGCAAGTCAAGAGCGACTAC
GTCTCCAAGTTCTTCATTATGTATCAGGGCTTCCTGCTGTTTTCATCCAT
GATTGGACCATCGACGGTTATCCTGATCATGGCTGCCGGCCTGGAGTTGG
TGGTTGGCAGTGCCGGAGGAGGAATCCTGCCGACAGTTATTGTGTTATCT
CTGATCTTCATCGGGTACGGAGTGCTGTGCCTTTACGCCAAGCAAGACAC
ACAACTCAAGTGGGCGAAGGTTCTGACGATGGTGTTTATGGTAGTCATGG
TGATCGTGCTGATTGGGCAGGCGCGCGAGATGGTGGAGGCCTTCCAGGAC
CTCGACGACAGGCTAAAACAGCAGAACGCCAACCACATCTCGGACGCTTT
GAAAAGTTGTCTTGACTGTGAAAATATTGGCTGTGGTGACTGCAAAACGT
TGACCTGCGAGGGACCTCTCGAATGGTCAAAGGATAACGTTTCGACATGG
TTGAAGGAGTGTTTTGGGCCAGATGACCAGTTTCGTAACATATCCGGCCA
CTTCACACAATACAGTGGTCTCCAGCTGTCTCTGTTTGACGAACAGACGC
TCTGTGACGTGTTCGCGATGCAAAACGGAGACCCTGCCAAGGAGAGGGAC
TGTAAGCTCATATTCAGAGAGTTCGTCAAGGTCAGAGATGAAAACGCTGC
GGTAACAAGCCCACCGCCGCCCACGATCTCAGACCATCTGCCCCTGCCGA
TGAGCGTGATCTACTTCCTCAGCCTGGCGGCTCTGTACCTCCTCACGGCC
CTGCTGCACCCGTCAGAGTTCCACAAACTACTGTACGGGTTCGTGTACCT
GCTGAGTTTGCCGTCTGGATACATCCTGATGACCATCTACAGCGTTTGTA
ACATGACGGACAGGTCCTGGGGTACACGAGAAATAAAAGTACCAGGTGTG
GCCGTTGGAGGTAAAAGTGTCATCGAGGTGATCTCCAACTTATGCAGAAC
TTTGTGCAGCTGTTGCCGGCGAGAAGATACTAAGCAGCCGTCAGTGGAGG
AGATTTCCAACTATGACGTTGACGATCAGGGAACTGTCGGGAGCGAGAGT
GGATCAGAAGACGAGCAGAGTGAGAACCAATCGCTGCCAGGCGACGTGAA
ACCAGCTCCTGCAAACAAGAGCAGTCTGTGGGGCGGGTCAGGTAAAGGCT
CGGTCCGTGGGCACCGGCCATCGATACACGGGACACTGCGGGGGCACCAC
CGTATGTTCGCCAGAAGGGTCAGCCAGCAGTTGATACATGACGTAAGCGA
CTTTCTCCCAAGCCAATGGCCGGCAGAACTAAGGCAAAAGTATGAGAAAA
AGTTCAGGGAGCACGGTTACGAGAACACGTCGTTCATTTTTGGGATGACC
AACAAGGATCTTGAGGCTATTGGCATTACCAAAAAGCTGCATCAAAACGT
TCTCATGAAGGAAATAAAAAAACTCCCGGAGTCTGAGCTGGATGACACCA
TCCCGGAAAACTGTCGGCAGTGGCTAGAGTCTATCGGCATGGAAGAGTAC
ATCAACAGTTTCGAAACGTACGGAATCATCTCGAAGGATCACCTGGCCAG
TCTCAAGTCCACGGACGTGGATGATCTGCTGAACGAGCTGAAGATAACAA
AAATGGCTCATATCAAGAGGATTGCCAACGCTATCAAGAAGATGAAGAGT
CCAGAAGAAACTGGCCGAAGAATACACCTTGTCAAGAGCATCATGAAGAA
GGTGAAGACGATCACCATGCAACACGACAGCACGAGGTCACTTGAGTTCA
AGTTCTGGGACAAGTTACGTCAGGAGTGCCTGGACCCGGAGATCGCCCTC
TTCAGTACTGATACAGACATCAGAACGCAGCTCGTGCAGTTGCGTAACTC
GTGGATCCGGGTCCTGCTGGTGCTGAACGTGATGTGGATCACACTGATCG
TGTCTCTGACGTACGTGGAGCAACTCAGAGTGTTGGGCAACAACCCCCTC
AGTCTGCTGTCTCTGCTGGTGTTCGGCGTTTTGCAGTTGCTTCAGTTCCT
GACGATGGTCTATCACCGGATGCGGACTCTACTGCACTACCTGGCGCGGC
TGCCTTACCCAGCATCCTTCACGATGCGCACCAAAGGAACCGGAAGTGGC
AGGGCTGACGTCATAGAGATCGAATCTCCTGATCCCGATGCTGACTTGTC
GCCAGGAGCATATCGTCGGCCGTCCTTATTTGCGTTACCTCCACCAACTT
TAGCTGCAGGACGTGCACGTCGACCTTCCTTATTTGGACTGCTCAGACAT
GAACAACCGCAACACTGGCCAGGGGCGCGGACAAACCCGGTTTATGAGGA
GGATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96872gene:BL96872Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96872_cuf12transcript:BL96872_cuf12-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96872_cuf12-E1BL96872_cuf12-E1-1564476830-73948Branchiostoma lanceolatumexon
BL96872_cuf14-E2BL96872_cuf14-E2-1564476830-73950Branchiostoma lanceolatumexon
BL96872_cuf14-E3BL96872_cuf14-E3-1564476830-73952Branchiostoma lanceolatumexon
BL96872_cuf14-E4BL96872_cuf14-E4-1564476830-73954Branchiostoma lanceolatumexon
BL96872_cuf14-E5BL96872_cuf14-E5-1564476830-73956Branchiostoma lanceolatumexon
BL96872_cuf14-E6BL96872_cuf14-E6-1564476830-73958Branchiostoma lanceolatumexon
BL96872_cuf14-E7BL96872_cuf14-E7-1564476830-73960Branchiostoma lanceolatumexon
BL96872_cuf14-E8BL96872_cuf14-E8-1564476830-73962Branchiostoma lanceolatumexon
BL96872_cuf12-E9BL96872_cuf12-E9-1564476830-73964Branchiostoma lanceolatumexon
BL96872_cuf15-E2BL96872_cuf15-E2-1564476830-73966Branchiostoma lanceolatumexon
BL96872_cuf12-E11BL96872_cuf12-E11-1564476830-73968Branchiostoma lanceolatumexon
BL96872_cuf12-E12BL96872_cuf12-E12-1564476830-73970Branchiostoma lanceolatumexon
BL96872_cuf12-E13BL96872_cuf12-E13-1564476830-73972Branchiostoma lanceolatumexon
BL96872_cuf12-E14BL96872_cuf12-E14-1564476830-73974Branchiostoma lanceolatumexon
BL96872_cuf12-E15BL96872_cuf12-E15-1564476830-73976Branchiostoma lanceolatumexon
BL96872_cuf12-E16BL96872_cuf12-E16-1564476830-73978Branchiostoma lanceolatumexon
BL96872_cuf12-E17BL96872_cuf12-E17-1564476830-73980Branchiostoma lanceolatumexon
BL96872_cuf12-E18BL96872_cuf12-E18-1564476830-73982Branchiostoma lanceolatumexon
BL96872_cuf12-E19BL96872_cuf12-E19-1564476830-73984Branchiostoma lanceolatumexon
BL96872_cuf12-E20BL96872_cuf12-E20-1564476830-73986Branchiostoma lanceolatumexon
BL96872_cuf12-E21BL96872_cuf12-E21-1564476830-73988Branchiostoma lanceolatumexon
BL96872_cuf12-E22BL96872_cuf12-E22-1564476830-73990Branchiostoma lanceolatumexon
BL96872_cuf12-E23BL96872_cuf12-E23-1564476830-73992Branchiostoma lanceolatumexon
BL96872_cuf12-E24BL96872_cuf12-E24-1564476830-73994Branchiostoma lanceolatumexon
BL96872_cuf12-E25BL96872_cuf12-E25-1564476830-73997Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000007genomeSc0000007:689503..705437 +
Properties
Property NameValue
Transcript idBL96872_cuf12
Biotypeprotein_coding