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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96882_cuf1 >transcript:BL96882_cuf1-protein ID=transcript:BL96882_cuf1-protein|Name=transcript:BL96882_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=260bp
HNCHASAQCANTYGGFSCTCSDGYIGDGTNCTDVDECTSGTASCDENASC
ENTDGSYTCTCNENYESTVPESTGFMGQCREVRLFPDGLEGHRLFGNSTT
EGMSPLIEIPEGLPMPGGRLCNSAYILENGVIVITTLKASQRSAVRPTYR
HPTTDPNAFGETVCGVIAPFWADVIMGENYPSEVRYEVYQQETGRGRVRS
SLRVPPSRGLNKXAQQRTRQKCHTSSAVYAYRFGVRHNRYDDVRSCGHVE
ENDDGRRSCQ Run BLAST on NCBI mRNA from alignment at Sc0000241:62824..65317- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96882_cuf1 ID=transcript:BL96882_cuf1|Name=transcript:BL96882_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2494bp|location=Sequence derived from alignment at Sc0000241:62824..65317- (Branchiostoma lanceolatum)
CACAACTGCCATGCATCTGCTCAGTGCGCTAACACCTACGGTGGTTTCTC
TTGTACATGCTCAGATGGATACATTGGAGATGGAACCAACTGTACAGGTA
TACGTTATTGTTATTGTAATATAACAGTGGTATATCATTCCGTCTGAATT
ATTTTGCTTTTGCTGATATTCTCTTCACAACACGCCTACCACATTGCCCT
AATCTACAGTTAGATATAATGTTATACAGTCAAAGTTGCATTGATCTCAA
ACACACACTCAAGGAACGGAGGGGAAATGGTTTGTAAGTAGGGACAGTTA
CTCCAGACAAGAGGGTCTTAATTATGGACAGGACTGTTTTTATGTGGCTT
ATGGCTGGGAGCGTTGGCTGCGCCAGGTGGTTGGCCGGTCAGGTTTGACT
TACTATGCTTAGGCAGGGTTTACACATGCATTTCCAAGCACACTCGGAGT
GTGAATGTACTTGGAAACGCGCGTGTAAACCGGGCCTTCATCAGAATCAC
CTCTTTGTTTCTCAGATGTGGATGAGTGCACCTCCGGAACAGCCTCTTGT
GACGAGAACGCCTCCTGTGAGAACACAGATGGTTCCTACACCTGCACCTG
TAATGAGAACTATGAGAGCACCGTGCCAGAAAGTACCGGATTCATGGGCC
AATGCAGAGGTATGTGTGTCCAGACTTTTCCATCATTAGTGCAGCATAAA
AAAGCTACCGTCTTGATTTAGTCTTGTGTTTGTATCCTCTTTGTGTATCA
TATTCACCCATATTGACCATATCCTGACGCTGTTACAGAACACACGCATC
TGTACATTTACTACGTTCCCATCGCTGTAGCTCATACATAATCAGTGAGT
AGTTGATTAGTGCACACATTCTAGCCACTGTCATTATAGGATTATTCGAA
TCAGACATAGTAAAAATCCCCCAAATGTGGTAGAGTTTGCAGTTAGTTTA
ACTTTTGTTCTCTCCTTGTCAGAGGTTCGCCTGTTCCCGGATGGTCTGGA
AGGACACCGGTTGTTCGGTAACTCTACAACAGAGGGGATGTCTCCACTCA
TCGAAATACCGGAGGGTTTGCCGATGCCTGGGGGGCGATTATGCAACTCT
GCCTACGTAGGTCCACTTTTTAATCAAGCTACAGAACAAGGCTTAACATA
TTAAGGAAAAGGATTCAACACTTTGTCAGAACAAGAGACGGGCTAAGATA
GACCCTGGAACAAGTTGTCGAAATTCTTGGTACACGATTTTGTTTTCATA
ACTTTCCTACGAAAGTGATTGAAAAGAACCTCATCATCTTCGTTTGAAGC
AAACTTAATGGCAGTACAAATGTCCATGGACATCAGCAAGCTAATCATCC
CCAAATCTATATACCACCTTGTTTAACACTTGCCAAGGAACAACGAGAAA
GATTCCAACTGACCTTGTAGATTTTATTTGAAGACCACGTGTTCTGTTTT
GTAGATCCTGGAGAATGGGGTGATTGTGATAACGACGCTGAAAGCATCTC
AGCGTAGCGCTGTGAGACCCACCTACCGACACCCCACTACAGACCCGAAC
GCGTTCGGAGAAACCGTCTGTGGGGTCATCGCGCCCTTCTGGGCTGACGT
CATCATGGGAGAGAACTATCCATCCGAGGTAATTATCTTTAGATATCATC
ATCATCATCGGTTGTCTGTGCAGTAGGCGACAGTGAGTTTCGACCAGTTC
CTTTTGTAGTTGGCCAGTTATACAATCTGCTGTGGTGTGAGTTGACCGTA
GTTGTCTCCTAGGAGCTGCTGAATGTATTGCAGATAGGTGGTTGGCGTCT
GCGTCTGCCATGAGATGTTTAGATAATGACATCTATCAAGTGAGTAAAGA
TAAAATGTCACTCAGTAAGATGAAACCAAACAAACCCCAGAGATATCAAG
TACAGATCATAATGAATAATATACGTGAATATGCCTGGCAACTATAGATT
TTGCCTATTATCTTTGGCCTTTTATGTTTTGTACCCTGTAGGTCCGATAC
GAAGTGTACCAACAAGAAACGGGCCGTGGACGCGTACGGAGCTCGCTGCG
AGTACCGCCCAGCAGAGGACTCAACAAAAANGCCCAGCAGAGGACTCGAC
AAAAATGCCATACTTCGTCGGCTGTCTATGCTTATAGGGTAGCTATTCAC
CACTACTTTACACAGTAGTATCAGTAGCAGCAATAAGTGAGTGAAGGATG
TCCTTATCCTCNTAAGTGAGCGAAGGATATCGTTATCCTCAGAAACACGC
CAGATTAACTAACCAAAATATGTGTCAACATGCGTCAAGTATCTCTAGTG
GGTGTCAAAAAACATGAACGTATATAAACAAGTTCGGCAGATTTGAATTG
CACATTTCATTTGAATTGCTTGAATTCATTTTTTCAACTTGTATCCCTTC
TTTAAAAGTTTGGAGTTCGGCACAACCGATATGATGACGTACGCTCTTGT
GGTCACGTGGAAGAAAATGACGATGGCAGGAGATCCTGCCAGGG Coding sequence (CDS) from alignment at Sc0000241:62824..65317- >transcript:BL96882_cuf1 ID=transcript:BL96882_cuf1|Name=transcript:BL96882_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=780bp|location=Sequence derived from alignment at Sc0000241:62824..65317- (Branchiostoma lanceolatum)
CACAACTGCCATGCATCTGCTCAGTGCGCTAACACCTACGGTGGTTTCTC
TTGTACATGCTCAGATGGATACATTGGAGATGGAACCAACTGTACAGATG
TGGATGAGTGCACCTCCGGAACAGCCTCTTGTGACGAGAACGCCTCCTGT
GAGAACACAGATGGTTCCTACACCTGCACCTGTAATGAGAACTATGAGAG
CACCGTGCCAGAAAGTACCGGATTCATGGGCCAATGCAGAGAGGTTCGCC
TGTTCCCGGATGGTCTGGAAGGACACCGGTTGTTCGGTAACTCTACAACA
GAGGGGATGTCTCCACTCATCGAAATACCGGAGGGTTTGCCGATGCCTGG
GGGGCGATTATGCAACTCTGCCTACATCCTGGAGAATGGGGTGATTGTGA
TAACGACGCTGAAAGCATCTCAGCGTAGCGCTGTGAGACCCACCTACCGA
CACCCCACTACAGACCCGAACGCGTTCGGAGAAACCGTCTGTGGGGTCAT
CGCGCCCTTCTGGGCTGACGTCATCATGGGAGAGAACTATCCATCCGAGG
TCCGATACGAAGTGTACCAACAAGAAACGGGCCGTGGACGCGTACGGAGC
TCGCTGCGAGTACCGCCCAGCAGAGGACTCAACAAAAANGCCCAGCAGAG
GACTCGACAAAAATGCCATACTTCGTCGGCTGTCTATGCTTATAGGTTTG
GAGTTCGGCACAACCGATATGATGACGTACGCTCTTGTGGTCACGTGGAA
GAAAATGACGATGGCAGGAGATCCTGCCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000241 | genome | Sc0000241:62824..65317 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96882_cuf1 |
| Biotype | protein_coding |
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