|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96888_cuf0 >transcript:BL96888_cuf0-protein ID=transcript:BL96888_cuf0-protein|Name=transcript:BL96888_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=404bp
DIFSKGTLGSGGGMGRNSRGGGRGGGLIHLDGFNFTLDGRITTDGEDATY
TDAGGGSGGSLWVTCDRFHGVGFIFSNGGNGNRYGGGGAGGRVTIYYNTG
NFKSGHIEAKGGTSSREPGGPGMAYLEGKNPVNKNLRVDNKCQQPTVTEP
TGDRAGEEQFAQYIQTGAIAYLFPPEDDFEYEFTLIEVYGSAHLTVKGNR
TMIRATQVLGDDTGHVHLPPYHTLHITEVSPYKRANITWAPYIYENATLI
LPTATIELRQPFDESQYNSDNCATARLRSAEVKIWGILDSSQAHVIVGSG
GTLTMQLPSPRNLEMVGLTIQDGGTLQLNSHYGMEDDQWVVQVYPDEKEG
KKRDGSVTLEGGGLLKARNLYLEAHTLTVDSAAVLHVSEQGDIEGPGAGS
NRAG Run BLAST on NCBI mRNA from alignment at Sc0000048:1876986..1879691+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96888_cuf0 ID=transcript:BL96888_cuf0|Name=transcript:BL96888_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2706bp|location=Sequence derived from alignment at Sc0000048:1876986..1879691+ (Branchiostoma lanceolatum)
GACATCTTCAGTAAAGGTACACTGGGGAGTGGGGGAGGAATGGGGAGGAA
CTCCCGTGGAGGAGGGCGCGGGGGAGGACTGATACACCTGGATGGGTTTA
ACTTCACCTTGGATGGGAGAATCACCACAGATGGGGAGGATGCAACGGTG
AGTACAAACATATAATGATAGGGATGAAGTTGTGTCATGTGTCAACATGT
GTTAAGATATTGGTTACACATACAGGGGTTTGTTACAAAGTTAAGATCAC
ATTCAATGAGATCTGAGGTTTTGTGAGGAAGTATATGGAAATATTAGAAA
AGTTGAGAACAATTTAAGATAGAGAAATGGAAGGGAATTAAACTCCAACT
TTTAAGGTAGGATCATATTCAATATTGTAGTCTAAAGTAAGTTTTATAGA
CTAACACCATTAAGTTACCAATAAGCAGCAAACACTTGCTATTGTTTGTA
CATTGATTGTTATGACATATCCTTTGACAATAGTATACAGATGCTGGTGG
AGGAAGTGGAGGATCACTCTGGGTGACCTGTGACCGTTTCCATGGTGTTG
GATTCATCTTCAGTAATGGTGGGAATGGAAACAGATATGGTGGAGGTGGA
GCCGGAGGGCGGGTAACCATCTACTACAACACCGGCAATTTCAAGAGTGG
ACACATTGAAGCCAAAGGTATTTTCAACATATGTAATTTGTTACTATTGA
GTGGCTTTGTAAGGCCATACCAATTTGATTCTTGGATCTAGCTGGGTTTT
TAAACAGGAAAATAATGGAGGGTGGCAAAACACAGATCAAAGACTTTGTG
ATTTAGTGTGCTGAATGCTAAGTTGACATGTATTTCGTTTTTTCATGAAG
GGGGCACCTCCTCGAGAGAACCAGGCGGTCCAGGCATGGCCTACTTGGAA
GGGAAAAATCCAGTTAACAAAAATCTACGAGTCGACAACAAATGTCAACA
GCCGACGGTAAGGAAGCCAAATGTAGTTTAGATAACTCGTTACTCTGAAT
GAATGGAATAAGGATTAGAATAGAGACAGTGGAAAGCAATGGTGGCTTGC
CTCAGCAACAGTTGAATTGTCACAAATGATGATGATGATGATGAGGAGGA
AAGATTGATAGTAAACTGACAAATCATTTTCATTCAATTATTCATTCATT
CATTGCAGGTCACCGAGCCAACTGGAGATCGTGCAGGGGAAGAGCAATTT
GCACAATACATACAAACAGGTGGGCAACTGCAACTGCACACAATCATGTA
CTTGTTGTAGCAAAGATGCATCATAAGTACTTTAAAACTATATACATTGT
GTGCCATCACTGATTTTTCAATTAAGGATTCAATACTTCCCAGATGTGCT
CTCTGACTACTTATCTGACAGCCATGTCACAGACTTCCCTTTAAGTAGTT
TTAAGGTCATTAATTCATGAACACTGTTTGATGACAATGTTTTTTTTGCA
GGTGCCATTGCCTACCTATTGCCACCTGAGGATGACTTTGAATANGGTGC
CATTGCCTACCTATTTCCACCTGAGGATGACTTTGAATATGAGTTCACAC
TGATAGAGGTATATGGCAGTGCACACCTAACTGTCAAGGGAAACAGGACA
ATGATACGTGCAACACAAGTACTTGGAGATGATACAGGACATGTACATCT
GCCACCATATCACACCCTCCATATCACAGAGGTACGAGCACTGTCAAACA
CTTTTCCAATGTTATTCATGCTGTTGGTTAAAGAAAAGGCTCTTGATGAA
AATGATACTTACAAAATTTTTTACTCCAATATTTTTTCCCACAGGTTTCT
CCATACAAGAGAGCTAACATCACCTGGGCTCCCTACATCTATGAGAATGC
TACACTGATTCTCCCCACAGCCACCATTGAACTGAGGCAGCCCTTTGACG
AGAGTCAGTACAACAGTGACAACTGTGCCACTGCAAGACTTCGAAGTGCT
GAGGTGAAGATATGGGGCATCTTGGACAGCTCACAGGCACATGTAATTGT
TGGGTCAGGTAAGGATTAAAACTCACTCACTAGTCACAGAGAGAGAGAGA
CACACACACTCACTCACTTTATTGCTCACTTATGTCACCCTCTTATTTCT
GCCAGGTGGGACTTTGACAATGCAGCTGCCAAGTCCCAGGAATTTGGAGA
TGGTAGGACTGACTATCCAAGATGGTGGCACCTTACAACTGAATAGTCAC
TATGGGATGGAGGATGACCAGTGGGTAGTGCAGGTAATTAAAGTTTTATG
TTGTTAATCTGTGTACATCTTCCCAGGCTAAAGAAAGTATTTAAGTATTT
CCTCATTTATACTCTTCAGTAACTACATATTGACGTGCCTTGTATATGAA
AATATATTGAATTTACAGGGTTCATTAGTAAGCAACATTTAATTGTTTAT
TTTTTTAATCCAAAAGAAGTTTTCATGTCAGTAACTTTGTATTATTCATC
TAGGCAATTACCATACTAAGCCTTTCATACAGGCTAGTAGTAACCAGTTG
TTCCTATTGTCCAATTCCAGGTTTACCCAGATGAGAAGGAAGGTAAGAAG
AGGGATGGTTCAGTAACGCTAGAAGGTGGAGGGTTGTTGAAGGCCAGGAA
CCTGTACCTGGAGGCGCACACCCTGACTGTGGACTCTGCAGCTGTCCTGC
ATGTGTCTGAGCAGGGCGATATCGAGGGACCGGGGGCGGGGTCCAACAGA
GCAGGG Coding sequence (CDS) from alignment at Sc0000048:1876986..1879691+ >transcript:BL96888_cuf0 ID=transcript:BL96888_cuf0|Name=transcript:BL96888_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1212bp|location=Sequence derived from alignment at Sc0000048:1876986..1879691+ (Branchiostoma lanceolatum)
GACATCTTCAGTAAAGGTACACTGGGGAGTGGGGGAGGAATGGGGAGGAA
CTCCCGTGGAGGAGGGCGCGGGGGAGGACTGATACACCTGGATGGGTTTA
ACTTCACCTTGGATGGGAGAATCACCACAGATGGGGAGGATGCAACGTAT
ACAGATGCTGGTGGAGGAAGTGGAGGATCACTCTGGGTGACCTGTGACCG
TTTCCATGGTGTTGGATTCATCTTCAGTAATGGTGGGAATGGAAACAGAT
ATGGTGGAGGTGGAGCCGGAGGGCGGGTAACCATCTACTACAACACCGGC
AATTTCAAGAGTGGACACATTGAAGCCAAAGGGGGCACCTCCTCGAGAGA
ACCAGGCGGTCCAGGCATGGCCTACTTGGAAGGGAAAAATCCAGTTAACA
AAAATCTACGAGTCGACAACAAATGTCAACAGCCGACGGTCACCGAGCCA
ACTGGAGATCGTGCAGGGGAAGAGCAATTTGCACAATACATACAAACAGG
TGCCATTGCCTACCTATTTCCACCTGAGGATGACTTTGAATATGAGTTCA
CACTGATAGAGGTATATGGCAGTGCACACCTAACTGTCAAGGGAAACAGG
ACAATGATACGTGCAACACAAGTACTTGGAGATGATACAGGACATGTACA
TCTGCCACCATATCACACCCTCCATATCACAGAGGTTTCTCCATACAAGA
GAGCTAACATCACCTGGGCTCCCTACATCTATGAGAATGCTACACTGATT
CTCCCCACAGCCACCATTGAACTGAGGCAGCCCTTTGACGAGAGTCAGTA
CAACAGTGACAACTGTGCCACTGCAAGACTTCGAAGTGCTGAGGTGAAGA
TATGGGGCATCTTGGACAGCTCACAGGCACATGTAATTGTTGGGTCAGGT
GGGACTTTGACAATGCAGCTGCCAAGTCCCAGGAATTTGGAGATGGTAGG
ACTGACTATCCAAGATGGTGGCACCTTACAACTGAATAGTCACTATGGGA
TGGAGGATGACCAGTGGGTAGTGCAGGTTTACCCAGATGAGAAGGAAGGT
AAGAAGAGGGATGGTTCAGTAACGCTAGAAGGTGGAGGGTTGTTGAAGGC
CAGGAACCTGTACCTGGAGGCGCACACCCTGACTGTGGACTCTGCAGCTG
TCCTGCATGTGTCTGAGCAGGGCGATATCGAGGGACCGGGGGCGGGGTCC
AACAGAGCAGGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000048 | genome | Sc0000048:1876986..1879691 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96888_cuf0 |
| Biotype | protein_coding |
|
