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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96916_cuf7 >transcript:BL96916_cuf7-protein ID=transcript:BL96916_cuf7-protein|Name=transcript:BL96916_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=424bp
SFSMGRGRSARFSVNSIRQSDVLTCAVNTIAGSDEKTVDPLVYELPQLVK
PPTALDRDIEATRLTVSFDQWTPDVDQGEGPAVSYLVKYRKVRDENWNSL
PPIQEDGLSAVHYQPITGLTSYTAYDISVQTFRIGERGGGPNGPAATVTT
KCLEPTEGPVNLRLGSVGARDATVMWDAPDIRTVRCREITGFRLYWKSPG
DFDYTVRYVESSKRNHTLSNLAPFSTYNVKMELINEIGPSPETPILSFKT
PEDVPEKVRSLTTSVLSPTIVGVSWDSPVRTNGILQGYDLSYNLTSRGQC
SPVTGTETVISVSRQTTNYIIQELFPYSTYEIAVSAKTSAGAGDAKVSTA
TTQEAVPSGPPSHIRAAQVDMEELTFSWDPPSCDVRNGVILRYDYIFDEV
EAATRESRTTGTVISTGATFNGLH Run BLAST on NCBI mRNA from alignment at Sc0000014:2997305..3000445- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96916_cuf7 ID=transcript:BL96916_cuf7|Name=transcript:BL96916_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=3141bp|location=Sequence derived from alignment at Sc0000014:2997305..3000445- (Branchiostoma lanceolatum)
CGTCCTTTTCAATGGGAAGAGGAAGGTCGGCCCGATTCAGTGTAAATTCG
ATCCGACAAAGTGATGTCTTGACATGTGCCGTGAACACCATAGCTGGATC
TGATGAGAAAACAGTGGATCCTCTTGTTTATGGTAAGTTTTGAAAAATAA
TGTCTAACTGTTCATTATCCAGAGGCCCATATCATTAATCTTTCAAAGCG
CTGTGATGCACGTAAAGCATGTTAGGTATTTGTTTTGCTTGTGCTTGAGA
GTTGGTTTGCATCACCTTGTCTTTTGGATTATGTTGGTAGCCAATGTGTG
TAGAATTGAGTTTAGAACGTTGTATTGTAATCTTATTAAGATACCTCTAG
TGGCTCAACTGCTGGACTAAGAAAAAGGCGTTTAGAAACTAGATGTTCCA
TTTATTTTTCAGAACTACCGCAGCTTGTGAAACCGCCAACCGCCCTTGAC
CGTGACATTGAAGCTACGAGACTCACCGTATCATTTGACCAATGGACGCC
CGACGTTGACCAAGGGGAGGGCCCTGCTGTATCTTATCTTGTGAAATATA
GAAAAGTCAGAGACGAAAATTGGAACTCACTCCCTCCTATTCAAGAAGAT
GGTTTATCAGCAGTGCACTACCAACCCATCACTGGACTAACATCGTACAC
AGCATACGACATTTCTGTGCAGACTTTCCGGATAGGGGAAAGGGGAGGGG
GGCCTAACGGCCCTGCTGCAACTGTCACAACAAAGTGCCTTGGTACGCTG
CCCTTTTATTGCTTTCCTAAATACACTATAGATTTGTATACAAGTGAATC
TTAAAGTACATTTTCAGTATTTTTTCTCAATNCAACAAAGTGCCTTGGTA
CGCTGCCCTTTTATTGCTTTTCTAAATACACTATAGATTTGTATACAAGT
GAATCTTAAAGTACATTTTCAGTATTTTTTCTCAATTAGAACTTTGTTGC
TTACCATGAGGGGAATGTGAGCTTTTTTTGCCAACTATTGAATTTTTGTA
CATCTGTTTGTTCAGAGCCTACAGAGGGTCCTGTCAACCTTCGCCTGGGA
AGTGTGGGTGCGCGGGACGCTACCGTGATGTGGGACGCACCCGACATCAG
GACCGTCCGCTGCAGAGAGATCACAGGTCCGAAATGCGTACCGTCTTCGA
ATGACGTAAAGAAAATGAAGACATAAACGCGCGTGCATATTCCGCGTGTG
GTTAGGAACTTCACGTGTGTATTTTCGTAGAATTAGGTCTCTACAAACTC
TACGACAGGCAAGTTTTTTCTATCTATTAATCAACAAGAACCATTTTCCG
CCAGTAAAAAACCTCTAACGTAGCTATAGACCAAAAGCATATCATGAGAG
AGTACAACACAGACTGTTAGTTAAGTATTGGGGGATGTCCTTGGTTCTGA
AAGGGGGGGGTGTTCCTACCGCCTGCCATGCGCTGGCCCGCCCCGACGCA
TGGCAAAGAGCGGTAGCTACTTGTAGCTTGGGCCCACTCCGATGTTAAAC
TTTCTTGAAGTCTGACGGGCTGAATAAAGTTCTTGGGAACCATGCGGCTC
CAGCTAGATGTTTTACAGGAGGATAACTGAGGTGCGATAGATGTCGGTTC
ACTGCGGAATGAGTCCACTCTACTTTATACTTCTTGAAGTCTAACTTTTT
TTGTTGTTACAGGCTTTCGTCTGTACTGGAAGTCCCCAGGAGACTTTGAC
TACACGGTGAGGTATGTGGAGTCCTCGAAAAGAAACCACACCCTGTCCAA
CCTGGCCCCGTTCAGCACTTACAACGTCAAGATGGAGCTGATCAATGAGA
TCGGACCTAGCCCAGAAACACCTATCCTGAGCTTCAAAACTCCAGAAGAT
GGTAAGGAGCTTATCTTTTTTTGGCGACGCCTTAGGGGTGGAGGTAGTTT
ACTCATGTTACTTAGTACAATGGAGTAGATTGGAAATTTGGAACTGTTTC
GGAATCCTCTTTAACCTTCTCCCTGATAAAGCGATGAATTAGCATTTGGG
CATCAAATTCGTACTGGTTACAGGGTTAAGCAGCATGAAGAGGGTACCAC
TTATCAATTCTAGATACTATCACGCCCTTAACTCTCCAGAAGGCTTTGGA
CCTAAAGCCCTACATTTGGAAAAGCACTATATGTTCTAAGCTTACATAAT
TCTTGTTGTAATTTCCAGTTCCTGAGAAGGTCCGAAGCCTGACCACTTCC
GTCCTCTCCCCGACCATAGTCGGTGTCTCGTGGGACTCGCCCGTCCGCAC
CAACGGGATTCTACAGGGTTACGACCTGTCGTACAACCTGACATCCAGGG
GACAGTGCAGTCCTGTTACCGGCACCGAGACTGTCATATCTGTCTCACGG
CAGACAACTAACTACATCATACAGGAGTTGTTTCCCTACTCCACCTACGA
GATAGCGGTCAGCGCCAAAACCAGCGCTGGTGCGGGCGACGCAAAGGTGT
CCACAGCCACAACGCAAGAAGCAGGTAGAAGTCTACAATGTGTCAAATTG
TATTTCTAGCTTTTCTTTTATATGAACTACTGTAATTTCTTTCCATACTT
ACTATAACATAAATATGTTGCCAGCTTCTTCTGAATTCACAATTTGTGTT
GGTACTTTTTTCACATTTTTTTAATTATCAAATATTCTTCTATGTTTATC
AACCAGCTACATCTATTCAGAGATGTCTATGGTGTCATAAAAGCGTGGTA
AATCATGATTCCGAATTTGATTATTATCATTAGTAACGGAGGTGGCCCAA
AATTTGCCACTTTTTTTAAAATCAAGTTTTGTAAAGGGGAATTTTACTTG
CATAAGTATTAAGTTGTTTGCTTATTTTTTGCCTTCCAACAGTACCAAGC
GGACCTCCCTCACACATACGTGCGGCCCAGGTAGACATGGAGGAGCTGAC
TTTTTCATGGGATCCGCCATCTTGTGACGTCAGAAATGGTGNGACCTCCC
TTACACATACGTGCGACCCAGGTAGACATGGAGGAACTGACTTTTTCATG
GGATCCGCCATCTTGTGACGTCAGAAATGGCGTCATCCTGCGATACGACT
ACATTTTTGACGAAGTCGAGGCGGCAACAAGGGAGTCCAGAACCACAGGA
ACAGTCATTTCTACCGGAGCAACCTTTAACGGTCTTCACCC Coding sequence (CDS) from alignment at Sc0000014:2997305..3000445- >transcript:BL96916_cuf7 ID=transcript:BL96916_cuf7|Name=transcript:BL96916_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=1272bp|location=Sequence derived from alignment at Sc0000014:2997305..3000445- (Branchiostoma lanceolatum)
TCCTTTTCAATGGGAAGAGGAAGGTCGGCCCGATTCAGTGTAAATTCGAT
CCGACAAAGTGATGTCTTGACATGTGCCGTGAACACCATAGCTGGATCTG
ATGAGAAAACAGTGGATCCTCTTGTTTATGAACTACCGCAGCTTGTGAAA
CCGCCAACCGCCCTTGACCGTGACATTGAAGCTACGAGACTCACCGTATC
ATTTGACCAATGGACGCCCGACGTTGACCAAGGGGAGGGCCCTGCTGTAT
CTTATCTTGTGAAATATAGAAAAGTCAGAGACGAAAATTGGAACTCACTC
CCTCCTATTCAAGAAGATGGTTTATCAGCAGTGCACTACCAACCCATCAC
TGGACTAACATCGTACACAGCATACGACATTTCTGTGCAGACTTTCCGGA
TAGGGGAAAGGGGAGGGGGGCCTAACGGCCCTGCTGCAACTGTCACAACA
AAGTGCCTTGAGCCTACAGAGGGTCCTGTCAACCTTCGCCTGGGAAGTGT
GGGTGCGCGGGACGCTACCGTGATGTGGGACGCACCCGACATCAGGACCG
TCCGCTGCAGAGAGATCACAGGCTTTCGTCTGTACTGGAAGTCCCCAGGA
GACTTTGACTACACGGTGAGGTATGTGGAGTCCTCGAAAAGAAACCACAC
CCTGTCCAACCTGGCCCCGTTCAGCACTTACAACGTCAAGATGGAGCTGA
TCAATGAGATCGGACCTAGCCCAGAAACACCTATCCTGAGCTTCAAAACT
CCAGAAGATGTTCCTGAGAAGGTCCGAAGCCTGACCACTTCCGTCCTCTC
CCCGACCATAGTCGGTGTCTCGTGGGACTCGCCCGTCCGCACCAACGGGA
TTCTACAGGGTTACGACCTGTCGTACAACCTGACATCCAGGGGACAGTGC
AGTCCTGTTACCGGCACCGAGACTGTCATATCTGTCTCACGGCAGACAAC
TAACTACATCATACAGGAGTTGTTTCCCTACTCCACCTACGAGATAGCGG
TCAGCGCCAAAACCAGCGCTGGTGCGGGCGACGCAAAGGTGTCCACAGCC
ACAACGCAAGAAGCAGTACCAAGCGGACCTCCCTCACACATACGTGCGGC
CCAGGTAGACATGGAGGAACTGACTTTTTCATGGGATCCGCCATCTTGTG
ACGTCAGAAATGGCGTCATCCTGCGATACGACTACATTTTTGACGAAGTC
GAGGCGGCAACAAGGGAGTCCAGAACCACAGGAACAGTCATTTCTACCGG
AGCAACCTTTAACGGTCTTCAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000014 | genome | Sc0000014:2997305..3000445 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96916_cuf7 |
| Biotype | protein_coding |
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