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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96919_cuf10 >transcript:BL96919_cuf10-protein ID=transcript:BL96919_cuf10-protein|Name=transcript:BL96919_cuf10|organism=Branchiostoma lanceolatum|type=polypeptide|length=289bp
VVILYLVSMLTMRFQCSGVVPDVTLVNEFPWVPPQSEFQFTYLKCVTSLP
LASFPFGIAEDTGRGLTFSMWRFAGTIREPAPWPGKEVNLLPNANLDRIG
AFYCTVQSGIKTYQVTTIKMSTTASIKPVVFTKTVNAGDTVTLEMQSVVS
IMAPIRWRHNDVIITMATGLSLPISGVSTLDEGIYECYYEGTRTSTTADQ
GIMRLIVRRCPANLWGSSCQDKCPGCYNGGVCDPDSGECVCPPGFTGGNC
DEACPVGVFGQGCDRECAEPNCTGRLLCLPDPYGCSCIS Run BLAST on NCBI mRNA from alignment at Sc0000014:3009451..3014903- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96919_cuf10 ID=transcript:BL96919_cuf10|Name=transcript:BL96919_cuf10|organism=Branchiostoma lanceolatum|type=mRNA|length=5453bp|location=Sequence derived from alignment at Sc0000014:3009451..3014903- (Branchiostoma lanceolatum)
GTTGTTATCCTTTACCTCGTCTCTATGCTGACAATGAGATTCCAATGTTC
AGGTGAGTGTTAATGTCATTTACATTCGCCTGGTCGTCTCATTTCTTTCT
TTCTCTCTTTCTCTCTTTCTCTCTTTCTCTCTTTCTCTCTCTCTCTTTCT
TACTGTCTTTCTTTCTTTCTTTCTTCAATGTTGCCTGTACGTCATTTTTT
CTGAGTCTGTCTTTCATCTTTTTAGATTGTTATAGTAAAATATACGCAAT
ATATAGTTAGAAAACGAGAGAACGTGTCATCAACGTTATTTGTCTCCTGT
GTTCAGATACATGTATGATGTTATGCAGTTAAGAGTCACATTTTTATCAT
CAAAGACAAAGTTCTACTTTGAAGAAGTGTCCACTTAGGGGCAAAATGCG
TTCGTTCGATTCAGTGGCTTGAATTTCAAACCAGTCTGCCATATGTATAA
AAAACAATCAATCATTTGGACTATCTAAACATTAAAGTAAATAGCCATTA
AAAATATATGTTATCTCAAGTCTTAAAATTTACGTTTCATTTAATTTTTG
TCAAACACATCTGTCGGTCATAGAAATATCATTGCAACGATGCATACATG
TATATGATTCAGTTTCCCATTTCAAATATATGATACATATGCAGTGTTGA
TACAACATCCTCAATTTTTGCAACGGTATGCGAGTCACACTCAGTTATTT
GTTGCGAATCTCTTCCCCAAAGCAAGGGAGTTTTTGAAATGATATTTTGT
CAAGCTTGCAAAAGTTTTAATTTCAATCAGCTGGTCACTCAATATGTAAT
CCCTTTCCCCCCTTCTTTATGCTCCAATTAAAACAAATATGGAAAGAAAA
TCAAACTAGGAAACGAGTTCTATAGCGTTGGTGAAGGTTAGACATCCAGG
TAGTAAGATACGCCAAAAATAGTTACTCAAGCAACTAATGATACATACGT
TTCAAAATTGTATCCATTTGCTTGAGTAACTATTTTTGGCGAGTTCTATA
GCCAATACGACGGTGGTTCATTCTGCAATTGAGCTGCTGTTACACCTTTG
TGCAGTTGAAAGTTAACATAAACGTAACTACAACAAAAGTTGCAAATAGA
GACAGAAATTAAAGATAAAATCGATTTTCTTAAGACATGACACAATCTGC
CACATTTTAAAGTCCGTATCGAAAAATTGAGAATTTCTATTCTCTGTCTT
AGTGTTTTAAGGACTATCTTATGTGTGATATATTCCTCTCTTCACATCCA
CCCACTGCTGTTCACGGTATAGAATTGTACTGTAGGTAAGGCCCCCAGTC
CCCTAGACTGCGATGGTGCTGCGACCTCGCTACGATCTAACCTGGAGTTG
TGTAACCCTTGACTTCATAATTGAAATATCACGCAAAATATAAAAGTATG
ACTGAAAGGGCAACACAACACACAAAGCGTAAAAAGATTCATTTTTTTAT
CTTCAAAATTCGTTGAACGCTGAGTCAAATGTTGGGTCGCAGCGAAGTCA
CCACGGTGGGATGGGGTGTAAGTGTAACGGGAAATCCGGGTTGTGTTTGG
TATCACGAGGTACTTGACAGGGAGGCCACCGGGCCCACTCCACGCTTTGT
GCGCTGTTTGCCAGCTTGTTAAGGGGTTAATCTGCCTGAAGTGTCGCTGG
TTTAATGGGGTCGTGTGGCGTAACGGCAGGGTGGTTGGCACAGAACCCAG
ATGCCCTGGGTTCGAATCCTGTCATGTCACCGATCTTGTGCCCTTGACAT
TCCTCACTCCACACAGGTGTAAAAATGAGTATGTGATGAAAGGAGAGGGC
ACCGTTCCCTACACACGATGGATAACAACCCACTGCCCCTACGGCCTAAA
AAGGCCCTTTATGCCTGGAACTGAATGACGTCAAAATGTTGCCAACGATT
CTAAAGTGAATTATCGATATTCCTCTGAAGAGTCGACGAAGTGCGATTTT
AAAGCTCCTTTACAACATTTGGATACAGGAGAATACTAGTATTGGATTTG
CGTGTTTGTGTATCTGAAAACCTTGGATGAAAAGAAAGTTGGTTGACGTA
CCGACTGATAAGTATCTAGTACCAGCTCAGCAAGGAACAAGAAATAGTCA
TGCCTTCAAGTACTAGAGTTATCAACCCAGAATTGAGATGTTCAAAAATT
CGTTTTCCCCTAGAACTATCATAGAGTGGAACATGTTACCACCAAGTGCT
GTACATAGGGACATACATTCTCACTAGATAAGTTTTAACGGTCTCATTCA
TGAGTTTTTTTCGCCCCATAGGCTTACATGATATATAATACGTGTTTTAC
ATGGGCGCGTTCGTAATGAAGCTATATATAGGAAATGCACCAATGTCATT
CTTTCTATGTTGAGAATATTTACCCTAGAACTTCACTACATCAAATCTCT
GTGTATAGCAATTACAAACTGTACTTAGCTACACCCAAAAAAAAGGCATT
TCTAGCTGTAAGCGCTCGACCGCATCGCCTGAAATGCAAGGCTGTGGACG
TCCGACCTCGCGCGCGGCTGTCGAACTTTACAGGCTAATTTCTTCAGTAA
CAAACAAGCTTTCATCAGTTTGACGCTTGAGATCAGGTGGGCTGGCTAAA
AGGGAATTTCCCACCGATATTGACACACGTTCGTGCAGCCGTTCATTTTT
TGGGCAACGGACTCTTTGAGTGTACCCACTCGGAGTAATACAGGAATGAG
ACCTTAAAAACACGCTTACAGCTACATGTGCAAAGGTTGGGTGTGCCTGT
GAAGCTGGTGTGTTACGACGCGTGGCGGTTATGCAGGCTATATAGATACA
GATACAGAAGTTATTAAGAAGATAAGGTTATCTTTTCTCCATTCATGTTT
CAGGTGTAGTCCCGGATGTGACGTTAGTGAACGAGTTTCCATGGGTTCCG
CCTCAGTCCGAGTTTCAGTTCACATACCTGAAGTGTGTGACGTCACTTCC
GCTGGCGTCCTTTCCGTTCGGGATCGCGGAGGACACGGGGCGTGGCCTCA
CATTCAGCATGTGGCGATTCGCAGGCACCATTCGCGAACCAGCACCTTGG
CCTGGAAAAGAGGTTAGGAACCCAGCTTCACATCTTTTTCGTTGCTATAC
ATTTTCAAGACAAGCCGCTAGGGGGCCCAAACTTACCCCTCTTACCCTCT
ACCCAATAGCTATCCACCGCTCAAAAATCACGACCCTAGCACTTCCAGAA
AATTAGACCTCAAACTTTGAAGTTCCGCTGCACTGCCGTAGGGAGCCGCT
AGGAGTCCCATTATCAAGCTTGACCTTTGTTTTTTTACCCACTTACCAAA
TATCATGAGGATCTATATCCTCACCTTCTCGAGTTATGCTGCCCACACAC
ACACAAACACACAAACATACAGGTTACACTGCAGTACCGTAGATAGAAAT
CAGATCCCATCATCGATCTTAAGATTTGTCTTCCTGGCGCCTACCCACCT
ACCAAATATCATGACAATCCATCCACGTTTTCTCCAGTTATACGGTTTTC
ATCAAACACCGTACATGTATCCACAGCCATTCCACCATAGCAAAACCGAA
AGAATAACTTTCTGGCAAAGGTGACTAGCGATGTATCAGTCAATCTCATT
ATTTCTTTCTCTGCAGGTCAACTTGCTGCCCAACGCCAATCTTGACCGAA
TAGGGGCATTTTACTGCACGGTACAGAGCGGTATAAAAACTTACCAGGTT
ACTACAATAAAGATGTCTACCACAGGTATAACACATGCACTTATCTTCTG
ACATTCTATTTCAATATGAATGGTACCTTTGGTCCTAACACTCCGTTCAA
TGAAATTTGACTTTACTGTGACGGTCATGTGTAGTTATCCATACTTTTTA
TACATACTAAAGCCCCTGTACCAAAATGCAAGGAAATTCTTGAATTTGTC
TTTCTGTTCATCTCCAGCAAGTATCAAGCCCGTGGTATTTACCAAAACAG
TAAACGCCGGAGATACAGTCACTTTAGAAATGCAGTCTGTAGTCAGCATT
ATGGCACCGATAAGATGGCGGCACAATGACGTCATAATCACCATGGCAAC
CGGCCTCAGTCTACCAATCAGCGGCGTCAGTACGTTAGACGAAGGTATTT
ACGAGTGCTACTACGAGGGAACCCGAACGTCAACGACGGCAGACCAGGGA
ATCATGAGATTGATAGTCAGAAGTAAGTGTTTTTGTCCCCCCTAGGGCTC
ATTGAAAATCGTGTGTTGGCGATATGATTTCCCCTGCTTAAATAAACAAA
AAACAAAAAAAACAGACAGAAAAACAAACGAAAAAAAGTCACTGTCATAT
TGGCTGATGATTGACGCGACGTGAAACGTGTCAAAAATGGTCAAAATCAT
TGCGAAACATGCATCATTCTTATATTTTCCAAAACGAAAATAAGGATAAT
TTGATAAAGGTTAGGCATCCAGGTATTAAGATATTAAACAACATACAATA
TTAAAGAACAGCTAATGGTAGAATGAACGGTAAAGTTTTTTAAAAGATGC
GGTATTCTAACGATCTGTTATAGACTGCTTCAAGATACAACGAAGACAAA
TGTAATCTGAAATATTGTTAGATTATCCTCATGGCATGTACTGCTCGCTA
CATTTGAAATACTTAAATACTGATGATTAGATCCAGATGGACATGAGATG
TATCACTGAAATTGAGGAATGTCTAATAAGAAAATATTTCCTGCTAAAAA
GGATGTCCTGCCAACCTGTGGGGTTCCAGCTGCCAGGACAAATGTCCCGG
ATGTTACAATGGCGGCGTGTGTGACCCTGACTCAGGAGAGTGCGTCTGTC
CTCCAGGCTTCACAGGCGGCAACTGTGACGAGGGTAAGTAGCCTGTAACA
GGTTCCGCGGATCGCTGGGAAAAAAAATTGACCAATTAGAGTGAATGATG
TGCTAAGGGAGTCAGCTACGGAGAGAGGGACAATTTTCTCTCCGTAGCCG
ACTCCCTTAGCATACTATTCACTCTCTTTGGCCAATTTCTACAATTTCCC
AGCGATTTTGCGGGGCCTGGTAGATGCTAGAGGGTAAGGGCAAACATAGC
ATAGGACAGTCACCAGCATTAGAAATTGGTGCCTTTAACAATGTCTAACT
ATGTCCAGACTCAACTCTCTACAATTCATTTTACCATCACCATACTTTCA
CTACCAAGGACAGGTAGAGTGTCCCGATTTCTGACGGGACGTCGGTAGAG
ACCACGTCTGTCGTCTGCAATGCCTTGCTTGTTGTTTTAACAAGGCGCTG
ACGTAGATGTGGGCTGTTTGTCTTTTTAGCCATCGGTAAACAGGCCTATA
ATATTAACAATTACAGTATTCCGTTGTTTGTTGTTCTACAGCTTGTCCGG
TTGGAGTTTTCGGGCAGGGGTGTGACCGGGAGTGCGCAGAACCGAACTGC
ACAGGTCGACTGCTGTGTCTGCCCGATCCTTACGGCTGCTCGTGTATTTC
CGG Coding sequence (CDS) from alignment at Sc0000014:3009451..3014903- >transcript:BL96919_cuf10 ID=transcript:BL96919_cuf10|Name=transcript:BL96919_cuf10|organism=Branchiostoma lanceolatum|type=CDS|length=867bp|location=Sequence derived from alignment at Sc0000014:3009451..3014903- (Branchiostoma lanceolatum)
GTTGTTATCCTTTACCTCGTCTCTATGCTGACAATGAGATTCCAATGTTC
AGGTGTAGTCCCGGATGTGACGTTAGTGAACGAGTTTCCATGGGTTCCGC
CTCAGTCCGAGTTTCAGTTCACATACCTGAAGTGTGTGACGTCACTTCCG
CTGGCGTCCTTTCCGTTCGGGATCGCGGAGGACACGGGGCGTGGCCTCAC
ATTCAGCATGTGGCGATTCGCAGGCACCATTCGCGAACCAGCACCTTGGC
CTGGAAAAGAGGTCAACTTGCTGCCCAACGCCAATCTTGACCGAATAGGG
GCATTTTACTGCACGGTACAGAGCGGTATAAAAACTTACCAGGTTACTAC
AATAAAGATGTCTACCACAGCAAGTATCAAGCCCGTGGTATTTACCAAAA
CAGTAAACGCCGGAGATACAGTCACTTTAGAAATGCAGTCTGTAGTCAGC
ATTATGGCACCGATAAGATGGCGGCACAATGACGTCATAATCACCATGGC
AACCGGCCTCAGTCTACCAATCAGCGGCGTCAGTACGTTAGACGAAGGTA
TTTACGAGTGCTACTACGAGGGAACCCGAACGTCAACGACGGCAGACCAG
GGAATCATGAGATTGATAGTCAGAAGATGTCCTGCCAACCTGTGGGGTTC
CAGCTGCCAGGACAAATGTCCCGGATGTTACAATGGCGGCGTGTGTGACC
CTGACTCAGGAGAGTGCGTCTGTCCTCCAGGCTTCACAGGCGGCAACTGT
GACGAGGCTTGTCCGGTTGGAGTTTTCGGGCAGGGGTGTGACCGGGAGTG
CGCAGAACCGAACTGCACAGGTCGACTGCTGTGTCTGCCCGATCCTTACG
GCTGCTCGTGTATTTCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000014 | genome | Sc0000014:3009451..3014903 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96919_cuf10 |
| Biotype | protein_coding |
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