transcript:BL96929_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96929_cuf0
Unique Nametranscript:BL96929_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96929_cuf0

>transcript:BL96929_cuf0-protein ID=transcript:BL96929_cuf0-protein|Name=transcript:BL96929_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=1917bp
GRLNVNVTEANGEDSSTIAFSWDAFKDGDVPTSVSSRAIGRYEWALTSST
ERKELLLPWAPIDIDSNDEERHEHTVSVPRHILATGCPKLVVRGFSKVGL
QSSVETDINDCSRSSIGPQHAVIDATGHIELEKNAVWTRDDADYTSSQSA
LAAVWPSLRHGQYVWAVIEESTGISDYGSVSGRSQFPYPCSHPLAISCGS
TTGEYVNVEDLALQHGRRYHICIHANRTTLVFETFSQELPAVSACSDGIT
VDHTPPSPGKVWIENSDGKTYQSSSSEIVVKWESFVDLEEHGTSHHVSGI
RTYLCAIGTSPGGIDVQEFTEVGNINSAIIHNLGLNSGVTYYATVKGVDF
VGLSSVAVSNGVTIDTTPPDKNDNAVDIGGLFLQSLDSISVSWSDVFFDK
ESGVTSFYWAVGSAPGVDDVVRLQPAENAMVEESAIDPPLLEGHTYYVTI
MAENGAGLVSTAISHGYVAETSPPEVGFVYDGPPTDPPNDLDYQSDKTTF
RAHWGGFHDPHTDIISYKWRIGTCPLCRDVLEEVDLGIKSDMSASNLPLV
PGFTYYVTVTACNAAQLCTTASSDGVLMDDTPPATGTVRDGAADMDLQYQ
PSAYLLRASWFGFHDAHSQLSHYEWRAGTSPGGSDILSPSQLHLAETALV
TMTTPMPADTKIYVTVKAYNKAGLWAEKSSDGFIIDATAPTVTTQTGIDL
SWGSLKADSQVIRTLLRVAWELADPDSGIDYHLLSVSTHQESRHNLPTVK
VSGNDQSYTFSDVTLHDGNSYSVTVVACNRAQLCTESTSSQIMVDGSPPT
VGTFAVGTDHVIDNQRPQSGWMTWQNNVNGNPTLLRLAWLGFTDVHSGIR
NYRVFVGTNFEADNLIPSGPVEVAPSGPALSTLEGVVHTAEIPVATVLSS
SSTVYIKIVAVNEAGLRGPASHEAFSLVASAADRGFLSLMRRCQAHSCQG
HCTCAPQDQLCTPTQSCNDITGGNPNTLIEVYDAIDLTDISSVSEENDVD
YTPAGDFLAAKWKVTRNSGLSVTRYEWSVGKKGQTVGSGVFDLLEDRIWQ
EANGANYGVIHLPVTQDGAHTLRGAEYVFYVRAWYSQTTYAVFSSDGVML
DITPPNVHSSIKVKDLMTTSATVDIDYTTQTATLVCGWDGVFYDTDSGIE
SFEVAIGLESNDDSISPYTDNKVSSATTTHQLDGLSLNEGIRYHCNVRAF
NKVLLYSTASSDGVTVDTIAPTAGVVMDGVVLHDVEYTNVSSSISASWHG
FWDSESFLHHYMWCLGTTTAAAECSVLAPTDVGLRTAARTQLDAALDSGV
KHFSKVYAVDNAGLQSNVARSDGVTIDTTPPVVLETLEVGQNIVEDFSFE
ESPSPIRVESGEALDLSSLPSFASSHWTVEDGSSAAVLNASAGDHGSNVL
YLAGSLSQQLTTTTGSKYRLTLSLLHNPFVQNKRSDEEVLIQAPGISKVV
QLYRRPGRHDSKNANRWQKVTIFFTATSASSSVSVATPGRTRGILVDNVD
VRLCNVMEAQEGMNSVHVELQIIHGLSSVFASWGFVDMESPIVDYMWAIG
TVQGGTQLQAFRSVGTSDQAINSDLTLTQGSNVYVTVVAVNSAGLRSVVH
SQPAMVDKTPPVISFVRDGSSDKDVDFQSDNVISANWDASDPESGISRIE
WAIGMEPGSSSISDYTVSEDPRSASKSVSGLSHGQTVYVTVRCHNNVGLY
STMSSDGVTIVTSPPSTAAAQLSVLTRSETHYPTRGNHQSQTDMLQLSWG
GFTDTTGIAAYQYTLEGPGSDNSTWYSLSPYGDTSTILGLDLQPDASYKV
FLRAINNVQMESASLQADVQIINSSPSVSGESNVTHSWEDDTNVVIDWEG
VFEAATDLVYEITIGTTLGGNDVQQWVETVETNIKVGPVDPTKHHFGTIT
AINPVGMYENVAFDFIR
Run BLAST on NCBI

mRNA from alignment at Sc0000014:2282670..2294219-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96929_cuf0 ID=transcript:BL96929_cuf0|Name=transcript:BL96929_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=11550bp|location=Sequence derived from alignment at Sc0000014:2282670..2294219- (Branchiostoma lanceolatum)
GGCCGCCTGAATGTCAATGTGACAGAGGCCAATGGAGAGGATTCTTCTAC AATCGCGTTTAGCTGGGACGCTTTTAAGGACGGAGATGTGCCCACATCCG TGTCGAGCCGAGCGATTGGTCGATACGAATGGGCACTGACATCCAGTACA GAGAGAAAAGAACTGCTATTGCCATGGGCTCCGATAGATATCGACAGCAA TGATGAGGTACGTGAAAAAAGTTGGTGACTACTACGTGTTAGCGAATGAA TGGGGAATATGCCAATTCTTTGACCTAAGAAAGGTCCTTCTCTACATTGG ATCTCCATGTCGATCTTGGCCTTCCTCTGCTTTTTCTTCCACCGAGTGGC TTCCAGTCAATGATGTTCTTCGCTGTCCTGTGTTTACAGTGATGGAATAA TTAGTATCTAACATTATAGCGCTCGTGTTCTTGTCGACAAACTTTATTGT TTCTCTCTCAGGAACGCCATGAACACACGGTCAGCGTTCCCCGACATATC TTAGCTACCGGCTGCCCAAAGCTGGTTGTCCGTGGCTTCAGCAAAGTGGG TTTACAGTCTTCAGTTGAAACTGACATCAATGACTGCAGTAGAAGCAGCA TCGGACCTCAACATGCTGTCATTGACGCTACAGGTGGGTTATGATTTGCC AGACCACACACAGTTGACACACCATCTTCAAAAACTGTTCCTTGTTAAAA CAAGTACACAGTCGCGTGCGTAGTAAACCAGTATTTCATCAGCGATTGAT ATGGTGAAATAATGCGCATGGTTCACATACAGGGCACATTGAGCTAGAAA AGAATGCCGTATGGACCCGAGACGACGCGGACTACACATCATCACAGTCT GCGCTGGCGGCCGTGTGGCCGAGTCTGCGACATGGACAGTACGTATGGGC GGTCATCGAGGAGTCTACAGGCATCAGTGACTACGGTAGTGTGTCTGGCA GAAGCCAGTTCCCATATCCGTGTTCACATCCCCTCGCTATATCCTGTGGC AGCACTACTGGCGAGTACGTCAACGTCGAAGATCTGGCACTCCAGCATGG CAGACGCTATCACATCTGTATCCACGCGAACAGAACGACACTAGTGTTTG AGACGTTTAGCCAGGAGCTACCGGCAGTCTCTGCATGTAGTGACGGCATC ACTGTAGACCACACGCCGCCAAGTCCGGGAAAAGTTTGGATCGAGAATTC TGACGGAAAGACTTACCAGGTACGCTCTATTCTTTATCATCAAATGTAGA GGATATGATGCTTTCTTGACGTTACCAAACAAAGGGATAGGGGCGTCAAT GATTTGAATCAGGACTTGAAAGATGTAATTGACGTATACAAATGATTTTG TCCTGCTGCAGTCATCGTCCTCGGAGATCGTTGTAAAGTGGGAGTCGTTT GTGGACCTAGAAGAACACGGAACATCTCACCATGTATCCGGCATCAGGAC ATACCTGTGTGCCATCGGTGAGTAACCTCTTTTTTTATGCCAGCTAAAAC AGCTTTAAAAAGTGGCATTTGCACTAACAATTCTTAATCTTTTCATAATG TGCGGTAGTCATTAAAACTTCTGACCCCGACTTTTATACCCCGCAGGCAC CTCTCCAGGAGGTATAGATGTTCAAGAATTCACAGAGGTGGGGAACATCA ACAGTGCCATTATCCACAACCTGGGTCTTAACAGTGGAGTTACATACTAT GCAACAGTCAAAGGTCTGCAACTTTTCACCTTATCGATTAAGGACAGGAC ATTAATGATAAGAAAGCAGCGTCCATACAAATCTTCGTAGGCTGTCACGT ATTTTTTTTTTATTATGTATCTTTTAAGTTCTGGTCACTTCCTCCTTAGG GTTCCGAGTAGTTGGTACTGATATGGATACAAAGATGAAAATAAATAAAT ATTCTGTGTCCTAAAGAAAGAAGTCGGACAACACAAAAGTAAAAGCCAGT GCAAATTTGTCGCAGCTGTAGCTGCTGCAAACCCAGAATTTGAGTTATCA GAATATAGTGGTAACACACCAATCAGTAACCATAACCCCCTCTTGTAAAT TAACAGGAGTTGACTTCGTCGGACTGTCGTCCGTTGCTGTCTCAAATGGC GTGACCATCGATACAACACCCCCTGACAAGAACGACAACGCGGTTGATAT TGGAGGTCTATTTCTTCAATCACTGGATTCCATCAGTGTTAGGTTTGTGA GTTTTCTTTTTGCCGTCTTTTTCCGCTTTGATTAATAGCATGGGGTGCTT TCCTACTTTCATTACCCTCAAAGTTGCACTAGTGCCTGTCTCCTTCCTTC ACACCATTGAAATATAGTTTTTATCAGTCGGGAAAGACTCTAGCACAAAA GACGAGCTTCCCGTGTTGCATCAAATACTAAAAAATTCCAGCCTTACACG AGGTATTTATAATGTATCAATCGATTCCTTTCATGTACAAAGCTGGTCCG ACGTGTTCTTCGACAAAGAGAGCGGGGTTACCTCGTTCTACTGGGCAGTT GGGTCCGCTCCTGGGGTGGATGACGTGGTGCGTTTACAACCCGCAGAGAA TGCTATGGTTGAAGAATCAGCGATAGATCCTCCTTTGCTGGAAGGCCACA CTTACTATGTAACAATAATGGTCAGTAGTTTGTATTGTTTTTGTTTGCAT GTACAAGTTGACTAAGTCAATGTTGTCCCATTCGTTTCTAGTTTTGGCAT AGAAGTTTCTATTTTATAAACCTTTTCGGAATGTTTAAACTTTCCATATT TCTTCCCAAAGGCGGAGAATGGAGCTGGCCTTGTCAGCACCGCCATTTCT CACGGCTACGTGGCTGAGACGTCCCCACCTGAGGTTGGTTTTGTGTATGA TGGACCCCCCACGGACCCTCCAAACGACCTGGACTACCAGTCTGACAAGA CAACCTTCCGTGCACATTGGGGAGGATTCCATGATCCTCACACAGACATC ATAAGTTACAAGTGGAGAATCGGAACATGCCCACTGTGCCGAGATGTCCT AGAGGAGGTGGATCTTGGGATCAAATCAGGTATTTTTAGTCGATACGTCC ATTTTTTTTTGGATGGCAAATCCTAATCAAACTAGCATTCAGACATTTGT AGAAAAATAACATAAAAAGAAAACTATATTATTATACCAATTTGTATAGG GCAGGTGATTTTTCTTAAAAGAAACGATTTTCTTATAATTTTTTATATTT TTGATTACTATGTCTTCCAGACATGTCAGCATCCAATCTGCCGCTCGTTC CCGGTTTTACGTACTACGTGACGGTTACAGCGTGTAATGCTGCCCAACTG TGCACTACCGCTTCTTCTGATGGAGTTCTGATGGACGACACGCCTCCTGC TACAGGGACTGTGCGCGATGGAGCCGCTGACATGGATCTCCAATATCAGC CATCTGCGTGAGTAGACATTTAGACCGATTGCAATAAAAATCCACTTGTA CAATTCATGATCAGGAGGGGCATTCGTTGCTAGACGCTAGCTTGCTCCAA TTGTTCTACTTAAATTGATCATAGGAAAAGTTCAATATAATGTCCAAAAT GTTTCAGATATCTACTGCGAGCCAGTTGGTTTGGTTTCCATGACGCCCAT TCTCAGCTCTCTCACTACGAGTGGCGTGCGGGAACATCGCCTGGAGGCAG CGATATCTTATCTCCTTCACAACTTCATCTGGCAGAAACGGCATTAGTTA CCATGACAACACCCATGCCCGCAGACACCAAGATCTACGTGACTGTCAAG GCCTACAACAAAGCAGGGTTGTGGGCAGAAAAAAGTTCAGATGGTTTCAT CATTGATGCAACCGCACCAACAGTGACTACACAGACTGGAATTGACCTGA GCTGGGGCTCATTGAAGGCTGATTCACAGGTATGTTTCTATAAACCTTTT GAAGAGTTTGGTAAAGCTTGCATAGTCTTTCTGATTTCTGCCTACATATG ACGCAATATGTGATAGCCTTGTCACCATACGAAGCTGAATATTTCAGGTC ATCAGGACACTTCTAAGAGTCGCCTGGGAACTTGCTGACCCCGACTCTGG CATAGATTATCATCTCCTGTCTGTATCCACTCATCAAGAATCTCGTCATA ACCTCCCTACAGTAAAGGTGGGGCGTTTGTTTCCTTTGTTTTGTTTGTTT TGATGTTGAAGCCTCTGCTGTGGGGCATTAGAAATGTTTTTCCCATACAG ACAATCAAAGATGTTCGATCTTATTACCGTGGTGTGGCTGTACATGGCTC TATATACTTACCTGCAAGTGTATTAATGTAACTCTTTTGAATGGAATCAG TAATTTATTTACAATTTGATGTGTTTCATCGATCTAAAACGTGCTTGCTT CACCCTTATACAGGTTAGCGGAAATGACCAGAGCTACACATTCAGTGACG TCACACTGCATGATGGGAACAGCTACTCGGTGACAGTGGTCGCCTGTAAC AGGGCACAGCTCTGCACAGAATCTACATCAAGCCAGATCATGGTTGGTTT ACATCGTCGTTTATAGAATTGCTAAATAGATAGAAGTTACAGTATTCAAA TCAAGCAACATTGTCAATGTAGTCACATCGATACATGCCTTGATGGAATT GTTGTGTTCATCTGATTTAGACTCGCTAATTCTTGAGATTAATGTTTTGC CTTAGGAGAGGAGTTTGATACTTTAATGTACACTTATGTTAGGTGGACGG CTCACCTCCAACAGTAGGCACGTTCGCAGTAGGAACGGACCACGTCATAG ATAATCAGCGTCCTCAAAGCGGATGGATGACGTGGCAAAACAACGTCAAC GGCAATCCTACACTTCTTCGCTTAGCATGGCTGGGCTTCACCGATGTGCA TTCTGGGATCAGGAATTATCGAGTTTTCGTGGGAACCAACTTTGAAGCAG ACAACCTGATTCCAGTAAGTATTGAAGTGGAATTTGTAAAAAAAAATTGA CATGTTAGTAATATACAGAATACAACGATTTCTATCTCTAAGATCTTAAA GTGATAGTGTGGAGCAAACAGTATACCCCATGGCCCATGGATGAATGCCT TGCGTCAAATTGAAATCCCATAGAAACGTTTGATGTTTGGGCAATTTTAT GGATACAAATATTATTACCATGACATTCTTGTGCGGTTTTGACCACATTA TTACCACCGGAAACAGAACAGTAATTTCATTAACGATTAAATCTATGAAC TGCAGTCTGGACCTGTAGAGGTTGCCCCCAGCGGACCAGCTTTGTCAACC TTGGAAGGAGTGGTTCATACCGCGGAGATTCCTGTTGCCACAGTGCTGAG CAGTTCTTCAACAGTCTACATCAAGATCGTTGCCGTCAATGAGGTACAGT GATCAGTCAATTCTTCCTCATGAAATAAACAAAAATGAGGTAGTGTTTTC TTGATAGCAGTTGCAACAAAGCTGATGTTTTCATCAGAGTCTCAAGGTTC ATACCTGTAATTTTTGTTTGTTGTTGTTCTTTTGAAGGCTGGACTGAGAG GACCTGCTTCCCACGAAGCTTTTTCCCTTGTTGCATCCGCCGCCGACAGG GGTTTTCTATCCCTGATGAGAAGATGCCAGGCCCACTCCTGCCAAGGACA CTGCACATGCGCACCTCAGGACCAACTGTGTACACCAACACAATCCTGTA ACGACATAACTGGAGGTAACTTGTGTATGATTAAATGTCTATGGACCAAA ATAGAGCCTTGTCAATACTCTGAACCTTTGCTTTTGATCTCCATTTCTTT TTGAAGTACTTAAGTGTGCATCAGGTACCAATCAACATTCCATAAACTCC TCCAGGAAATCCAAATACGCTGATAGAAGTTTATGATGCCATCGACCTGA CGGACATCTCCTCGGTATCTGAAGAGAACGACGTCGATTACACTCCTGCT GGGGACTTCCTGGCTGCCAAGTGGAAAGTCACAAGAAATTCAGGCCTTTC AGTTACGAGGTACTTAAAATTTACTCAAGTAACTAACTAACCAACTCGAG TACACTTTATCTGCTGCTACATACAGGCAAGGAAACGCCAGGTTTCACCA ACAAGCTTTAAAAACTCGTAGAAATCTGTCTTTTCGTGCAGTGACTGCAA CAAAGTATGTGACTGTTTTTATGTCCACAGATACGAGTGGAGTGTAGGAA AAAAGGGTCAAACCGTGGGCAGCGGTGTGTTTGATCTTTTGGAGGACAGA ATATGGCAGGAAGCAAACGGTGCCAACTACGGTGTCATCCATCTACCCGT TACACAAGATGGGGGTAAGTACATCTCTGTAATCAAATGTCTACTCGTCA TCTTATGGTCTAATCTTCCTTGTCAGCATTTTTGTGAGCCTAGACGAAAA TAATCCATATGAAATATTACTGTCTGAACCTTGCGTTTTTTCTACATTTA CACAGCTCACACATTGCGTGGAGCAGAATATGTGTTTTACGTCCGAGCAT GGTACTCACAAACAACGTACGCAGTCTTTTCTTCTGACGGGGTCATGTTA GACATTACACCTCCTAATGTTCACAGCTCAATAAAGGTACGATATATAAA ATTGAATAAAGGGGCTTCGCAACATATGATCAACAATATCTAAATACATG TTAACACAACCTATATACTGCTACTGCTGAAATTGGTGGATGCATATGTA TTTGCCACTAGTTCCTAGACCGTTAGACCTAGTATAGACCATATAGAATA TTCGTCGATGAAGGTTACACATCAAGGGAGTAAAATACGCAAGATCACAG TTACTCAAGGCGCTAAAGTATCCAGTTGCTTGAGTAACTCTTATCTTGCG CAAACAGACCCCTGAGTAATAACACTATCTTTACAAGTTTGGAAATATCA GATTCAAGCCTTCATGATTCATTCGCAAATGTGATTTTCAATTCCGACCA ACTGTATAAAATGTTTACCGTTATTGTTTTGGTCTTTAGGTCAAAGACTT GATGACTACATCTGCCACCGTAGACATTGACTACACCACTCAAACTGCGA CGCTTGTTTGCGGCTGGGATGGTGTGTTCTATGACACCGACAGCGGCATC GAGAGTTTTGAAGTTGCTATTGGGCTAGAATCGAATGGTAAATATAAAAG TGAAACTAGGATACTTAAATAATTGATGCACATTATGTTGAAATGTGCGT GCAAAACACACCGACTTCACTGTAGTTATTGGATGCAAGCAGTTATCACT AGAAAAATATAAACAATCGAATGATCCAAGCGCAACATGTTATAAAGGAT TATTGATATTCTTCAGACGATTCTATCTCACCGTACACGGACAATAAGGT CAGCAGCGCAACAACAACGCACCAACTGGATGGTCTATCTCTGAATGAGG GAATAAGATATCACTGCAACGTCCGTGCATTCAACAAGGTACTGCTGTAC AGTACAGCCTCGTCAGACGGTGTGACCGTGGACACGATAGCGCCAACGGC AGGTGTCGTCATGGACGGAGTCGGTATGTTTCTTCTACCATGATTTTGAC TTATACAATTTCTATGTATCAATTGCACTTCTAAGCTTAAGATTGGTTAT ATGTCATAGTGACAATGATTTCAAGGACGTGGATGTGCAGCATGAAGAGT TTTAATTTAGCCACGGTTGACCGACTAATTTCGCTAATAATGAGTTCTGT CGTTCTTTCGTAACAGTTCTTCACGATGTTGAGTACACAAATGTGTCCTC GTCCATCTCTGCTTCATGGCACGGCTTCTGGGACTCGGAGTCGTTTCTTC ACCACTACATGTGGTGCCTGGGAACCACTACGGCTGCAGCAGAGTGCTCG GTATTGGCGCCTACAGATGTAGGACTTAGAACCGCTGCAAGGACTCAGCT TGACGCGGCACTAGATTCTGGTAGGAGTTACATTATTGTTTGAAACTCGA ATATGGGCTTCAATGTTTTAGTAATGAACCAATTGACGTATCATAAATGA GACATTGTGCTTGTCATGTATCAGTGCATCTTGCAAAAACTTGCATGGAT ACTATACTTTAATACATTTTACATTTACATTTTGCCAGGTGTGAAGCACT TCTCGAAAGTGTACGCTGTCGACAATGCCGGTTTGCAGTCAAATGTCGCA AGGTCTGACGGAGTGACCATCGACACGACACCCCCAGTTGTGTTGGAAAC GTTGGAGGTCGGACAGAACATTGTAGAAGATTTCTCATTCGAAGAATCGC CAAGCCCAATACGCGTGGAGTCGGGAGAAGCGCTGGACTTAAGTTCACTA CCTTCTTTCGCGTCATCACACTGGACCGTTGAAGACGGCTCAAGCGCTGC GGTTCTAAACGCGTCTGCGGGAGATCACGGGAGCAATGTCCTGTATCTTG CAGGTTCCCTCTCACAGCAGCTTACTACAACCACAGGCAGCAAGTACAGA CTCACATTATCACTCCTCCACAACCCCTTCGTACAGAACAAGCGGTCAGA TGAAGAAGTCCTGATACAAGCTCCTGGGATCAGCAAGGTTGTTCAACTGT ACCGCCGACCTGGTCGACATGATTCAAAGAACGCGAACCGGTGGCAGAAA GTTACGATCTTCTTCACAGCAACGAGCGCGTCGTCCTCTGTTTCTGTAGC GACGCCGGGAAGAACGAGGGGAATCCTCGTGGACAATGTTGACGTTCGGC TGTGCAACGTCATGGAGGCCCAGGAAGGAATGAACAGCGTCCATGTCGAA CTTCAGATCATCCATGGCCTGTCTTCAGTGTTCGCCAGCTGGGGATTTGT GGACATGGAGAGTCCCATCGTTGACTACATGTGGGCTATAGGTATGTCCA CTACTTCACTATTGTCATTGCAGTATCAGATATCTAGTCCCCGAATGTTA CATGTGTGACGGGTTACATGAAGTGCATCACTATTTACAAACCCGGATGT GTTCTATATGTAATAGCTTGTTTTATACAGCTAGTGACAAAACGTACATT TTTGTCAACAGGCACAGTACAAGGAGGAACCCAACTGCAGGCTTTCCGCT CTGTTGGGACCAGTGACCAAGCAATCAACAGTGACTTGACCCTAACCCAA GGATCAAACGTCTACGTCACTGTCGTGGCGGTCAACTCAGCTGGACTTCG CAGTGTGGTGCATTCGCAACCAGCCATGGTGGACAAAACGCCTCCAGTCA TATCTTTCGTTCGGGATGGATCCAGTGACAAGGGTAGGTGCAATGTCACT GTCGCGTATATCAATGATCAAATCAAATCATGTCAGTTTCTTTGACACTT CAATGAATAGATAAAGTGAATGACTAGCGTTCTTTCTTCTATTCCAGATG TCGACTTCCAAAGTGACAACGTCATTTCCGCAAACTGGGATGCTTCAGAT CCGGAAAGCGGAATCAGCAGGATCGAGTGGGCAATAGGTACATGATACCT TTTAGTACAGAATATCAATACTTTCATCATTTCATTAACAGTGTTTGTTT ACATTCTTTTTGTGAATTCATTATAAGGCCTTATTTCGTTCTACGTTGCT ATGAAGAATTGTGATGGCAACGCTTTGTTTGGAAGTTAGATTGTCGTTAC CTAGTTTGCACCTTGAGTCCTTCAATGGACACAACTGATGACGAATTAAT CAATTTTCACGTCTCTTGATCTCCTACCACAGGCATGGAGCCCGGTTCGT CTTCAATCAGTGATTACACAGTGTCCGAAGACCCCAGGAGTGCTTCGAAG TCGGTGAGTGGTCTCTCCCACGGACAAACAGTCTACGTCACCGTGAGATG CCACAACAACGTGGGTCTGTACTCCACCATGTCGTCCGACGGCGTCACCA TAGTGACGAGCCCACCCAGCACGGCCGCAGCACAGCTAAGTGTGCTGACT CGCTCAGAGACACACTATCCAACACGAGGCAACCACCAGTCACAAACGGA CATGCTGCAGTTGTCATGGGGTGGATTCACTGACACGACAGGCATAGCAG CTTACCAGGTATGAGGCTTTGAAGATGTGAAAATATAGTACCCTATGCTT CTCTACACCTTCGGAATCTGGTACAGAATTCGACACTGTAGTAAACTTAT GTTGTCACAGTTCAGATGAAAGTAGATCTTGTAAATGTGTTGATACTTCA CCAAATACATGTCTCAATCCATGCAGTATACCCTAGAGGGACCGGGTTCA GATAACTCAACTTGGTACAGTCTGAGTCCCTATGGAGACACGAGTACTAT ATTGGGCCTTGATCTTCAGCCAGACGCCAGCTACAAGGTGTTTCTCCGCG CCATCAACAATGTCCAAATGGAGAGTGCGTCACTCCAGGCTGATGTCCAG ATCATCAATAGTAGCCCGTCTGTGTCAGGTATTACAGCTTTTGTACAATA ATTCAGTGATGTATAAACAACTTATCTTCAACTCAACAATCAAAGCCACC ACGTGTTCTTTATCCAGGCATTTGTGGTACAGCCAAAGTTTACCATGCTC GTTTAACGCATTGTGGATGTAAGACTATCACAGGTTTGGTATGTAAATGT ATAAAGAATACAATATGCACGTTTGCTATATTTTATTGATACCGTGCCGT AAATACCCCATCTGACGTTCAAATTGTTTTTCAGGGGAGTCTAATGTGAC CCACAGTTGGGAGGATGACACGAACGTAGTGATAGACTGGGAAGGAGTCT TCGAGGCAGCAACAGACCTTGTGTACGAGATCACCATTGGGACAACCCTC GGCGGAAATGACGTGCAACAGTGGGTGGAGACCGTGGAGACTAACATCAA AGTAGGACCGGTGGATCCTACTAAGCACCACTTCGGAACCATCACTGCCA TCAACCCAGTCGGGATGTATGAAAACGTAGCCTTTGACTTCATTCGTTAA ACAAGCATATCAAGAGCACCACTCACATTTATGAGAAGGAATACACAGAT AATTACCACGATTTTGATAAGTCTCCTGAAGTTTGTTGTACATGTATATG GCGATAGATAATAGCGCGCTGCATGTACATGTAAAAGACAATAAGCTTAT AATTCATAAATGAGGGTATACGTTATTACTGACTGATACATATAGATTAT ATGTACAACCGATTGGGACTTAGGCCTTGCTTGTACGTAATATGTACAAA GACTGTCCATATAGAATTGCATAGTAAATAGTGAATATATCACTAGAAAT TATTGATAGATTTTGCAGCATTATCTGACAAGTATACAATAGTATTGTAC AAGTCTTGGTGGGGAAAATCCTTGGATCTTGCTGTTTGAAATACTAATAT TGATAACTAGAGGAACTTGCAAAGGACCGTTTTTAGCCCTCAGTTCACAG TACAGGCGTTAAGCAGCAAAAAGGTATATAGGTTACAATATAATGAAATT TCACAACGCTGCAAGGTTTTGATTCATATGTACAAAACAGAACACACAAT TCTGCTACACCAAGCTTTACGCATCTTACATACGTGTACAAGGAGTTAGA ATTCGTGGACACTTTTGATTTTAAAGAATATTGTAAGATGTGCAATATTG TGCAGATAGATGTACTTTTTAGACTGGTGAAGTTGCAATAAAGCATAGAG

Coding sequence (CDS) from alignment at Sc0000014:2282670..2294219-

>transcript:BL96929_cuf0 ID=transcript:BL96929_cuf0|Name=transcript:BL96929_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=5754bp|location=Sequence derived from alignment at Sc0000014:2282670..2294219- (Branchiostoma lanceolatum)
GGCCGCCTGAATGTCAATGTGACAGAGGCCAATGGAGAGGATTCTTCTAC
AATCGCGTTTAGCTGGGACGCTTTTAAGGACGGAGATGTGCCCACATCCG
TGTCGAGCCGAGCGATTGGTCGATACGAATGGGCACTGACATCCAGTACA
GAGAGAAAAGAACTGCTATTGCCATGGGCTCCGATAGATATCGACAGCAA
TGATGAGGAACGCCATGAACACACGGTCAGCGTTCCCCGACATATCTTAG
CTACCGGCTGCCCAAAGCTGGTTGTCCGTGGCTTCAGCAAAGTGGGTTTA
CAGTCTTCAGTTGAAACTGACATCAATGACTGCAGTAGAAGCAGCATCGG
ACCTCAACATGCTGTCATTGACGCTACAGGGCACATTGAGCTAGAAAAGA
ATGCCGTATGGACCCGAGACGACGCGGACTACACATCATCACAGTCTGCG
CTGGCGGCCGTGTGGCCGAGTCTGCGACATGGACAGTACGTATGGGCGGT
CATCGAGGAGTCTACAGGCATCAGTGACTACGGTAGTGTGTCTGGCAGAA
GCCAGTTCCCATATCCGTGTTCACATCCCCTCGCTATATCCTGTGGCAGC
ACTACTGGCGAGTACGTCAACGTCGAAGATCTGGCACTCCAGCATGGCAG
ACGCTATCACATCTGTATCCACGCGAACAGAACGACACTAGTGTTTGAGA
CGTTTAGCCAGGAGCTACCGGCAGTCTCTGCATGTAGTGACGGCATCACT
GTAGACCACACGCCGCCAAGTCCGGGAAAAGTTTGGATCGAGAATTCTGA
CGGAAAGACTTACCAGTCATCGTCCTCGGAGATCGTTGTAAAGTGGGAGT
CGTTTGTGGACCTAGAAGAACACGGAACATCTCACCATGTATCCGGCATC
AGGACATACCTGTGTGCCATCGGCACCTCTCCAGGAGGTATAGATGTTCA
AGAATTCACAGAGGTGGGGAACATCAACAGTGCCATTATCCACAACCTGG
GTCTTAACAGTGGAGTTACATACTATGCAACAGTCAAAGGAGTTGACTTC
GTCGGACTGTCGTCCGTTGCTGTCTCAAATGGCGTGACCATCGATACAAC
ACCCCCTGACAAGAACGACAACGCGGTTGATATTGGAGGTCTATTTCTTC
AATCACTGGATTCCATCAGTGTTAGCTGGTCCGACGTGTTCTTCGACAAA
GAGAGCGGGGTTACCTCGTTCTACTGGGCAGTTGGGTCCGCTCCTGGGGT
GGATGACGTGGTGCGTTTACAACCCGCAGAGAATGCTATGGTTGAAGAAT
CAGCGATAGATCCTCCTTTGCTGGAAGGCCACACTTACTATGTAACAATA
ATGGCGGAGAATGGAGCTGGCCTTGTCAGCACCGCCATTTCTCACGGCTA
CGTGGCTGAGACGTCCCCACCTGAGGTTGGTTTTGTGTATGATGGACCCC
CCACGGACCCTCCAAACGACCTGGACTACCAGTCTGACAAGACAACCTTC
CGTGCACATTGGGGAGGATTCCATGATCCTCACACAGACATCATAAGTTA
CAAGTGGAGAATCGGAACATGCCCACTGTGCCGAGATGTCCTAGAGGAGG
TGGATCTTGGGATCAAATCAGACATGTCAGCATCCAATCTGCCGCTCGTT
CCCGGTTTTACGTACTACGTGACGGTTACAGCGTGTAATGCTGCCCAACT
GTGCACTACCGCTTCTTCTGATGGAGTTCTGATGGACGACACGCCTCCTG
CTACAGGGACTGTGCGCGATGGAGCCGCTGACATGGATCTCCAATATCAG
CCATCTGCATATCTACTGCGAGCCAGTTGGTTTGGTTTCCATGACGCCCA
TTCTCAGCTCTCTCACTACGAGTGGCGTGCGGGAACATCGCCTGGAGGCA
GCGATATCTTATCTCCTTCACAACTTCATCTGGCAGAAACGGCATTAGTT
ACCATGACAACACCCATGCCCGCAGACACCAAGATCTACGTGACTGTCAA
GGCCTACAACAAAGCAGGGTTGTGGGCAGAAAAAAGTTCAGATGGTTTCA
TCATTGATGCAACCGCACCAACAGTGACTACACAGACTGGAATTGACCTG
AGCTGGGGCTCATTGAAGGCTGATTCACAGGTCATCAGGACACTTCTAAG
AGTCGCCTGGGAACTTGCTGACCCCGACTCTGGCATAGATTATCATCTCC
TGTCTGTATCCACTCATCAAGAATCTCGTCATAACCTCCCTACAGTAAAG
GTTAGCGGAAATGACCAGAGCTACACATTCAGTGACGTCACACTGCATGA
TGGGAACAGCTACTCGGTGACAGTGGTCGCCTGTAACAGGGCACAGCTCT
GCACAGAATCTACATCAAGCCAGATCATGGTGGACGGCTCACCTCCAACA
GTAGGCACGTTCGCAGTAGGAACGGACCACGTCATAGATAATCAGCGTCC
TCAAAGCGGATGGATGACGTGGCAAAACAACGTCAACGGCAATCCTACAC
TTCTTCGCTTAGCATGGCTGGGCTTCACCGATGTGCATTCTGGGATCAGG
AATTATCGAGTTTTCGTGGGAACCAACTTTGAAGCAGACAACCTGATTCC
ATCTGGACCTGTAGAGGTTGCCCCCAGCGGACCAGCTTTGTCAACCTTGG
AAGGAGTGGTTCATACCGCGGAGATTCCTGTTGCCACAGTGCTGAGCAGT
TCTTCAACAGTCTACATCAAGATCGTTGCCGTCAATGAGGCTGGACTGAG
AGGACCTGCTTCCCACGAAGCTTTTTCCCTTGTTGCATCCGCCGCCGACA
GGGGTTTTCTATCCCTGATGAGAAGATGCCAGGCCCACTCCTGCCAAGGA
CACTGCACATGCGCACCTCAGGACCAACTGTGTACACCAACACAATCCTG
TAACGACATAACTGGAGGAAATCCAAATACGCTGATAGAAGTTTATGATG
CCATCGACCTGACGGACATCTCCTCGGTATCTGAAGAGAACGACGTCGAT
TACACTCCTGCTGGGGACTTCCTGGCTGCCAAGTGGAAAGTCACAAGAAA
TTCAGGCCTTTCAGTTACGAGATACGAGTGGAGTGTAGGAAAAAAGGGTC
AAACCGTGGGCAGCGGTGTGTTTGATCTTTTGGAGGACAGAATATGGCAG
GAAGCAAACGGTGCCAACTACGGTGTCATCCATCTACCCGTTACACAAGA
TGGGGCTCACACATTGCGTGGAGCAGAATATGTGTTTTACGTCCGAGCAT
GGTACTCACAAACAACGTACGCAGTCTTTTCTTCTGACGGGGTCATGTTA
GACATTACACCTCCTAATGTTCACAGCTCAATAAAGGTCAAAGACTTGAT
GACTACATCTGCCACCGTAGACATTGACTACACCACTCAAACTGCGACGC
TTGTTTGCGGCTGGGATGGTGTGTTCTATGACACCGACAGCGGCATCGAG
AGTTTTGAAGTTGCTATTGGGCTAGAATCGAATGACGATTCTATCTCACC
GTACACGGACAATAAGGTCAGCAGCGCAACAACAACGCACCAACTGGATG
GTCTATCTCTGAATGAGGGAATAAGATATCACTGCAACGTCCGTGCATTC
AACAAGGTACTGCTGTACAGTACAGCCTCGTCAGACGGTGTGACCGTGGA
CACGATAGCGCCAACGGCAGGTGTCGTCATGGACGGAGTCGTTCTTCACG
ATGTTGAGTACACAAATGTGTCCTCGTCCATCTCTGCTTCATGGCACGGC
TTCTGGGACTCGGAGTCGTTTCTTCACCACTACATGTGGTGCCTGGGAAC
CACTACGGCTGCAGCAGAGTGCTCGGTATTGGCGCCTACAGATGTAGGAC
TTAGAACCGCTGCAAGGACTCAGCTTGACGCGGCACTAGATTCTGGTGTG
AAGCACTTCTCGAAAGTGTACGCTGTCGACAATGCCGGTTTGCAGTCAAA
TGTCGCAAGGTCTGACGGAGTGACCATCGACACGACACCCCCAGTTGTGT
TGGAAACGTTGGAGGTCGGACAGAACATTGTAGAAGATTTCTCATTCGAA
GAATCGCCAAGCCCAATACGCGTGGAGTCGGGAGAAGCGCTGGACTTAAG
TTCACTACCTTCTTTCGCGTCATCACACTGGACCGTTGAAGACGGCTCAA
GCGCTGCGGTTCTAAACGCGTCTGCGGGAGATCACGGGAGCAATGTCCTG
TATCTTGCAGGTTCCCTCTCACAGCAGCTTACTACAACCACAGGCAGCAA
GTACAGACTCACATTATCACTCCTCCACAACCCCTTCGTACAGAACAAGC
GGTCAGATGAAGAAGTCCTGATACAAGCTCCTGGGATCAGCAAGGTTGTT
CAACTGTACCGCCGACCTGGTCGACATGATTCAAAGAACGCGAACCGGTG
GCAGAAAGTTACGATCTTCTTCACAGCAACGAGCGCGTCGTCCTCTGTTT
CTGTAGCGACGCCGGGAAGAACGAGGGGAATCCTCGTGGACAATGTTGAC
GTTCGGCTGTGCAACGTCATGGAGGCCCAGGAAGGAATGAACAGCGTCCA
TGTCGAACTTCAGATCATCCATGGCCTGTCTTCAGTGTTCGCCAGCTGGG
GATTTGTGGACATGGAGAGTCCCATCGTTGACTACATGTGGGCTATAGGC
ACAGTACAAGGAGGAACCCAACTGCAGGCTTTCCGCTCTGTTGGGACCAG
TGACCAAGCAATCAACAGTGACTTGACCCTAACCCAAGGATCAAACGTCT
ACGTCACTGTCGTGGCGGTCAACTCAGCTGGACTTCGCAGTGTGGTGCAT
TCGCAACCAGCCATGGTGGACAAAACGCCTCCAGTCATATCTTTCGTTCG
GGATGGATCCAGTGACAAGGATGTCGACTTCCAAAGTGACAACGTCATTT
CCGCAAACTGGGATGCTTCAGATCCGGAAAGCGGAATCAGCAGGATCGAG
TGGGCAATAGGCATGGAGCCCGGTTCGTCTTCAATCAGTGATTACACAGT
GTCCGAAGACCCCAGGAGTGCTTCGAAGTCGGTGAGTGGTCTCTCCCACG
GACAAACAGTCTACGTCACCGTGAGATGCCACAACAACGTGGGTCTGTAC
TCCACCATGTCGTCCGACGGCGTCACCATAGTGACGAGCCCACCCAGCAC
GGCCGCAGCACAGCTAAGTGTGCTGACTCGCTCAGAGACACACTATCCAA
CACGAGGCAACCACCAGTCACAAACGGACATGCTGCAGTTGTCATGGGGT
GGATTCACTGACACGACAGGCATAGCAGCTTACCAGTATACCCTAGAGGG
ACCGGGTTCAGATAACTCAACTTGGTACAGTCTGAGTCCCTATGGAGACA
CGAGTACTATATTGGGCCTTGATCTTCAGCCAGACGCCAGCTACAAGGTG
TTTCTCCGCGCCATCAACAATGTCCAAATGGAGAGTGCGTCACTCCAGGC
TGATGTCCAGATCATCAATAGTAGCCCGTCTGTGTCAGGGGAGTCTAATG
TGACCCACAGTTGGGAGGATGACACGAACGTAGTGATAGACTGGGAAGGA
GTCTTCGAGGCAGCAACAGACCTTGTGTACGAGATCACCATTGGGACAAC
CCTCGGCGGAAATGACGTGCAACAGTGGGTGGAGACCGTGGAGACTAACA
TCAAAGTAGGACCGGTGGATCCTACTAAGCACCACTTCGGAACCATCACT
GCCATCAACCCAGTCGGGATGTATGAAAACGTAGCCTTTGACTTCATTCG
TTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96929gene:BL96929Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96929_cuf0transcript:BL96929_cuf0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96929_cuf0-E1BL96929_cuf0-E1-1564476830-120833Branchiostoma lanceolatumexon
BL96929_cuf0-E2BL96929_cuf0-E2-1564476830-120831Branchiostoma lanceolatumexon
BL96929_cuf0-E3BL96929_cuf0-E3-1564476830-120829Branchiostoma lanceolatumexon
BL96929_cuf0-E4BL96929_cuf0-E4-1564476830-120827Branchiostoma lanceolatumexon
BL96929_cuf0-E5BL96929_cuf0-E5-1564476830-120825Branchiostoma lanceolatumexon
BL96929_cuf0-E6BL96929_cuf0-E6-1564476830-120823Branchiostoma lanceolatumexon
BL96929_cuf0-E7BL96929_cuf0-E7-1564476830-120821Branchiostoma lanceolatumexon
BL96929_cuf0-E8BL96929_cuf0-E8-1564476830-120819Branchiostoma lanceolatumexon
BL96929_cuf0-E9BL96929_cuf0-E9-1564476830-120817Branchiostoma lanceolatumexon
BL96929_cuf0-E10BL96929_cuf0-E10-1564476830-120815Branchiostoma lanceolatumexon
BL96929_cuf0-E11BL96929_cuf0-E11-1564476830-120813Branchiostoma lanceolatumexon
BL96929_cuf0-E12BL96929_cuf0-E12-1564476830-120811Branchiostoma lanceolatumexon
BL96929_cuf0-E13BL96929_cuf0-E13-1564476830-120809Branchiostoma lanceolatumexon
BL96929_cuf0-E14BL96929_cuf0-E14-1564476830-120807Branchiostoma lanceolatumexon
BL96929_cuf0-E15BL96929_cuf0-E15-1564476830-120805Branchiostoma lanceolatumexon
BL96929_cuf0-E16BL96929_cuf0-E16-1564476830-120803Branchiostoma lanceolatumexon
BL96929_cuf0-E17BL96929_cuf0-E17-1564476830-120801Branchiostoma lanceolatumexon
BL96929_cuf0-E18BL96929_cuf0-E18-1564476830-120799Branchiostoma lanceolatumexon
BL96929_cuf0-E19BL96929_cuf0-E19-1564476830-120797Branchiostoma lanceolatumexon
BL96929_cuf0-E20BL96929_cuf0-E20-1564476830-120795Branchiostoma lanceolatumexon
BL96929_cuf0-E21BL96929_cuf0-E21-1564476830-120793Branchiostoma lanceolatumexon
BL96929_cuf0-E22BL96929_cuf0-E22-1564476830-120791Branchiostoma lanceolatumexon
BL96929_cuf0-E23BL96929_cuf0-E23-1564476830-120789Branchiostoma lanceolatumexon
BL96929_cuf0-E24BL96929_cuf0-E24-1564476830-120787Branchiostoma lanceolatumexon
BL96929_cuf0-E25BL96929_cuf0-E25-1564476830-120785Branchiostoma lanceolatumexon
BL96929_cuf0-E26BL96929_cuf0-E26-1564476830-120783Branchiostoma lanceolatumexon
BL96929_cuf0-E27BL96929_cuf0-E27-1564476830-120781Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000014genomeSc0000014:2282670..2294219 -
Properties
Property NameValue
Transcript idBL96929_cuf0
Biotypeprotein_coding