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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96999_cuf18 >transcript:BL96999_cuf18-protein ID=transcript:BL96999_cuf18-protein|Name=transcript:BL96999_cuf18|organism=Branchiostoma lanceolatum|type=polypeptide|length=236bp
KFSCIHCTKFREHFEELRENRQLKDRLNHLCYLLSDNSLALLPEYEQRVQ
VLKRLRYLDAAGTVQLKGRVACEISNHELLITELVFENVLTDLQPQEIAA
LLSCIVFQERRCVEPTLTETLQKGKDAMVAMATRLAELQRECGVNVQVED
CVEELKFGLVEAVFQWAQGMPFSKITELTDVQEGVIVRCIQRLDETCRDV
RSAARIIGDPNLYAKMELASEKIKRDIVFAASLYTQ Run BLAST on NCBI mRNA from alignment at Sc0000004:7412481..7419965+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96999_cuf18 ID=transcript:BL96999_cuf18|Name=transcript:BL96999_cuf18|organism=Branchiostoma lanceolatum|type=mRNA|length=7485bp|location=Sequence derived from alignment at Sc0000004:7412481..7419965+ (Branchiostoma lanceolatum)
GAAGTTCTCCTGCATCCACTGCACCAAGTTCAGGGAGCACGTGAGTCTGG
CGTGGGTTACTGCGTGGGTGTCTGTGTGGGTAGGTGGGTGTGTTCTATGT
GTGTGGGTGGGTGTGATCCTCCTGGAGTCCCTGGAGAAGTTCTCCTGCAT
CCACTGCACCAAGTTCAGGGAGCATGTGAGTCTAGCGTGGGTGTCTGTGT
GGGTAGGTGGGTGTGTTCTATGTGTGTGGGTGGGTGTGATCCTCCTGGAG
TCCCTGGAGAAGTTCTCTGTCCACTGTGTGGGTGTCTGGGTGGGTAGGTG
GGTGTGTTATAATCATATGTGTGTGGGTGTCTGGGTGGGTGGGACATGGG
AAATATGTGTTAAGTGCCTTTCCCAAGGGCACAACGTCTGGGTGCATGTC
CGGACATGTCTGGGTACTCCACTGGGGATTGAACCTGGGTCTTATTGGTT
CATAGCCGGATGCTCTGCCACTATGCCACACAGGACCACCAGTGGATATC
TTCCACCTCTCACCCTCTAGATGTGATCTCAACAGAAGTTCTCCTCCATC
TCTTCTCAATGTTTGCTCCTTTTTCTCTCCAGTTTGAGGAGCTGAGGGAG
AACAGACAGCTGAAGGACAGACTGAACCACCTGTGCTACCTGCTGTCGGA
CAATAGCCTGGCGTTGTTACCTGAGTACGAACAAAGAGTACAGGTGAGAA
ACACCTTAATTACTTACCAGGGATCTCCCTAAAGAATGGTACAGTGGCGC
TCCTCCATCCTGTTCTAATCCCAGATCTATCCTGTTGATTTTCAAAGTTA
GGGCATTTTTTCCAATTTTTACGCAGCAAAGCCTGTAATTTTGCTCAAAA
CTAGAAATTTCAGGTGTAAAGCTGAAGTTGCAGAAAATAACTGCCATTAT
GTCTGAAAAAGGCAAAAGGCAACATCCGCTCTCCTTTTGAAAGTTGTGCG
CCCCCTCCAGATCTACCCCCTCACGACACGTATCCTGTGCCCGGCACCCT
CCCCCCATCCTGCTATATATTTCTGGGGAGATCCCTGCTAAGTTACCTTT
CCTACAAGTATGCTACAGGTGTACTTACCTGTTCCCACCTTTTTCTGGGT
TACCAAGGAGTTGACCAGGTATGGTGCATTTAAAGGGGCGCGTTGCGTGT
GAGATCAGTAACTCACCTTTTCTCACCTGTTGTGTCTCACCTGTTGTCTC
ACCTGTTGTGTCTCACCTGTACAGGTGCTGAAGAGGCTGCGTTACCTGGA
CGCGGCAGGTACGGTGCAGTTGAAGGGGCGCGTGACGTGCGAGATCAGTA
ACTCACCTGTCCTCACCTGTTGTCTCACCTGTTGTGTCTCACCTGCTGTA
TTCTCACCTGTGCAGGTGCTGAAGTGGCTGCGTTACCTGGACGCGGCAGG
TACGGTGCAGTTGAAGGGGCGCGTGGCGTGTGAGATCAGTAACTCACCTG
TTGTCTCACCTGTTGCAGGTGCTGAAGCGGCTGCGTTACCTGGACGCGGC
AGGTACGGTGCAGCTGAAGGGGCGCGTGGCGTGCGAGATCAGTAACTCAC
CTATACTCACCTGTTGTCTCACCCGTTGTGTTCTCACCTGTTGTGTCTCA
CCTGTTGTGTCCCACCTGTACAGGTGCTGAAGCGGCTGCGTTACCTGGAC
GCGGCAGGTACGGTGCAGCTGAAGGGGCGCGTGGCGTGCGAGATCAGTAA
CTCACCTATACTCACCTGTTGTCTCACCTGTTGTGTTCTCACCTGTTGTG
TCTCACCTGTTGTGTCCCACTTGTACAGGTGCTGAAGCGTCTGCGGTACC
TGGACGCGGCAGGTACGGTGCAGCTGAAGGGGCGCTTGGCGTGCGAGATC
AGTAACTCACCTGTCCTCACCTGTTGTCTCACCTGTTGTGTCTCACTTGT
TGTGTTCTCACCTGTACAGGTGCTGAAGCGGCTGCGTTACCTGGATGCTG
CAGGTACGGTGCAGCTGAAGGGGCGCGTGGCGTGGGAGATCAGTAACTCA
CCTGTACTCACCTGTTGTGTCTCACCTGTTGTCTCACCTGTTGTGTCCCA
CCTGTACAGGTGCTGAAGCGGCTGCGTTACCTGGACGCGGCAGGTACGGT
GCAGCTGAAGGGGCGCGTGGCGTGCGAGATTAGTAACTCATCTGTTCTCA
CCTGTTGTGTCTCACCTGTTGTGTCTCACCTGTTCTCACCTGTACAGGTG
CTGAAGCGGCTGCGTTACCTGGACGCGGCAGGTACGGTGCAGCTGAAGGG
GCGCGTGGCGTGCGAGATCAGTAACCACGAGCTGCTGATCACCGAGCTGG
TGTTCGAGAACGTTCTGACTGACCTTCAGCCGCAGGAGATCGCTGCGCTG
CTGTCCTGCATCGTCTTCCAGGAGGTCCGTCTGTTTGTTTGTTTGTTTGT
TTTGTTCTGATTGAATGACAGACTTAAATGTGCAGGGAATGGCTTGTGCC
TCCCTAAATTATGTACAGTTTGATACATTGGCTATTATCTTACCACTAAA
ATCAACCAACACACTTATGATACAAAATGTGGGTCACTTCATTTTCCACT
GCCTTCAAAAAAGAAGTCAAACCCAATCATAGTCAACCTTAGTTAACATA
GAACTTTCATTGTAGACTAGATAACTATGTCGATTCCCATGTATTTCCAT
GTACTTGTTTGTCTGCACTTAGCCTTCGGGCATGAACTTACAATAGAGTT
ATCATTGAAAATATCAAGCCATTAGACAACAAATTATTTACATTATTCAA
ATTGAGCAAGAGAGCTGGAGATTGCATCCCCAGTAAACCTCATGGTGTAA
CACGCCAGGTTTGTACTGAAGAGTACAAGCCGCATATCCGACAGATTTAT
TTGATCCACCCACACTTGGAATGACCCCTACTCTTTTCGATAAGTGTGGC
GGGTTCTACTTTGCAGTTGAGAGTTCAAGGCCCAACCGTTGTTGTGATTT
TGTTGTAACAACTCTACCCACTTCTTCCACTATGTGTAGTTTCCTTGTCA
GGTTTAGTTAAGTAAAATTTTCTTTTCCCTTATCAACCCTACAGAGAAGA
TGTGTGGAGCCTACTCTGACGGAAACACTGCAAAAGGTAGGATCAACAAT
TGTGTAATTTTTTTGTTTTTGTTTTGATTTGTTTTGTTTCACAGAACACA
CCATATTTTGTATAGAAGGTAACAATCAGTCAGGGGGTTGTTTAAGTAAC
TTTTGATTTAGACTGACTGAACTATTCAGTGAGGAGGAGTTGAGTCGGCA
AACAGTTTGATGCTGCATAATGTGATGTTTAGTAACATTTGATTTAGAAT
GTATGATGTATGAATTTATGATGTATATCACTTAGAAAAGACGAGAGTCT
GTCCAGGGAGGGGTGGGGTTCCTAGAATGATGATGATTTAGAATAACAGA
GATATTATCTGTATCTGTATCTATATAGCCGGTATAACCGCCATTAGGCG
TAACACACCAGCTTGGCAGGCACGCGGCGCGGCAGCAGCTGGTCATATTA
CACCGAACGGTCTGTTACACCTAGTCTTTGCATATCTGACTGCAACCGTT
CTTTAAAGCTACTTAGTGAAGATGCTCCTACAATACTTGATGACAACGAG
TTCCATTCTACTATGGTTCTTGGGAAATACAAATTTTTGAACACATCAAT
ATTGGAACTCAGGAGGCGTTGACGTGAACTTTCCTGATTCCCGTCCCCAG
GGCAAGGATGCGATGGTTGCCATGGCAACACGTCTAGCGGAGCTGCAGCG
GGAGTGCGGCGTGAACGTGCAGGTCGAGGACTGCGTGGAGGAGCTCAAGT
TCGGCCTGGTGGAGGCCGTGTTCCAGTGGGCCCAGGGCATGGTGGGTAAT
GTAGGGCATGGTGGGTAATGTAGGGCCTGGTGGGTAATGTAGGGCATGGT
GGGTAATGTAGGGCCTGGTGGAGGCCGTGTTCCAGTGGGCCCAGGGCATG
GTGGGTAATGTAGGGCATGGTGGGTAATGTAGAGCATGGTGGGTAATGTA
GGGCATGGTGGGTAATGTAGGGCCTGGTGGAGGCCGTGTTCCAGTGGGCC
CAGGGCATGGTGGGTAATGTAGGACATTGTGGGTAATGTACATGATTGTG
TGTTCCAGTGGGCCTAGGGCTTGGTGGGTAATGTACATTGTGTGTTCTGG
TGGGCCCAGGGCATGGTGGGTAATGTAAGGTATCGTGGGTAATGCTGGGC
ATGGTTGGTAACCCAGGGCATTGTGGGTATCCTGTGGCATTGTGGGTAAT
TTGGGGTGGCAGGGGGGCCCTGATGTGCATCCCTTACTCCACACCTACGG
TTCCCTTTGTGCAGTGATAGGGCCGAGTGCACAGGCACAGTTTGGCTGAT
TCGTTACATGTTTCTTTTGGCCTTTCGATATATCTGTGTCAGAATGATGA
TTTCGTGTGATTTTTTTTTTTCCATGCAGCCGTTTTCCAAGATCACAGAG
CTGACAGATGTGCAGGAAGGTCAGTTGTATTCAAGTTTCCTTCTTTTGGT
GATGGGAGGGGGGTGGGGGGCATAGCTGAAGCTTCTTTCTTATTTAGGTG
TAAAGAAAAGGGCTGTTTGTGAACATGTCCAGGTTTATTGTTACAACAAG
TTGTACTTACTAAAAGGTCAGTGTACTGGAAAGTGTGCATGTTTTGTGTT
CATTCAAGTGCAGGAATCTACAGTTTTGTGATCTTTACTCTGAATCTTTA
CTCTGTTCAAAACTCCTGGGCTGAGCGCATTCAGCTCGAAATGCATGTAT
TGAGGTCGGTACCAGCGTTTCAGCCAGACTGATGGTCGAAGGCATGAGCT
TGCTAGGGGGGGGTCAGGGGGCATGTCCCCAGAAAATGTTGACATTTCGA
ACCCTCTCAAACACCTGTTTCTTTGCATATATGAAAATATTTATAAACAA
AGATATTCAGGGGAAAAAATATGCAGGGGGGCTAGAAGCCTAGGTGGCTT
TTCGTGGGCCTCCCCTCGAAATTAGACAATAGAATTGTTTTAATTGTGCA
TAATCAAAACTAATCAAAATTAACAAAAGGAAAATGTTGAAACTATACCA
TAAATCCTAATGAAACAAATGAGAGTGAAGAGGAATTACAAAATGAATTC
TGTAATATTGTCGGTGCAATAGCATTGTTTTCAGTTCTAGTGTGCATGAT
AATTGTTTCTGTATGAATGAAAACAAACGAAAAAGAGGAATTTATTACAA
AATGAATTTTGTAATATTGTCGGTGCAATATTATTGTTTCCACAGGCATT
TTTTTGTTTTACTTTCAGTTCAAGTGTGCATGATATGTTTCTGTATGCGT
GAACTTGCGACCGCGTTTTGACGTCGGTGCGATATCGTTGTTTCCGTAGG
CGTGATCGTACGCTGTATCCAGCGGTTGGACGAGACGTGTCGGGACGTTC
GCAGCGCCGCCCGCATCATCGGAGACCCGAACCTGTACGCCAAGATGGAG
CTCGCCTCCGAGAAGATCAAGCGGGACATCGTCTTCGCCGCCAGTCTCTA
CACGCAGTAGGATTGTTTCCTTTTTTGTTTTGTATAACTGGTAAACAAAC
TGGTACACAAGCTTCGTCAGACCGGGACTGTTCGGTTTGATCCACTCACA
CCAGAAGATCAAGAGAGACATTGCGTTCTCGGCCAGTCTGTATAAACGGT
AGCATCGTTTGTTTGCTTTGCATAACTGGTTAGCAAATTTCTAGATGTGA
CACACCAGTTTAGTACAGTAAGTATGTTAGCTGCATTAAATCGGACTGTT
CGGTTTGATCCACTCACACCAGAAGATCAAGAGAGAAATTGTGTTAACGG
CCAGTCTGTATACGCAATAGCACTTGTGTATAAACCAGCTCTAGGCTTAA
CACACTAGTTCTGTCCAGTGGGTTCAAGCTATGTCAGACCGGACTGTACG
AAGGTTTGATAAGCTCACATTAGAAGATGTGAGACATTGACAGTGTTCCA
CGCCAGTCTGTACACGCAGTGGCACTTGTGTGAAACCAGTAAACCTCCAG
TTTTGTACAGTTTGTACCAGCTGCAAATGTGCGTCAGACTGGGACTGTTA
GGTTTGATCCACTCACACAGAAGATCAAGAGAGACAATAATCGTGTTTGC
CGCCAGTCTGTATACCTGTTAACCACCTCTAGGCTTGATACCGCTCAGGG
CTTGAAATAGTGAGTGCATATGCACCTGTGTGCACCCAAAATTGGAGCTG
TGCACCTAATTTTTGACTCTGGGTGCACCAGTGCACCTAGATATTTTTGT
AGGCAATAGGCCTTAAAAAAATAAAGGTACACTAGTTTACAGAATATTCT
TGAAATGGAAGTATCAGAAAAAATAATATAATTTGTAACAGTTGTACTTT
ATTTGATGTATTACTTGTTTTAAATTTTGAAGTTAGCTATAGAATTACAA
ATTGAAGTTCTTAAGATCATTAAACTTTGTAATTATGTTTTGCTGGTATT
CAACTTTATTTTGTGGTGCACCCAAAATTCTTTCTGTGCACCTAATTATC
TTGGTTGGGTGCACCAGTGCACCTATTTCCAAAAATGAATTTCGAGCCCT
GCCGCTGTATTGTACAGTGGGTAAAAGCTATGTTAGACCGGACAGCAAGG
CTTGATCAGCACCATAAGATGTGAGACATTGCTCATGTTCCACGCCAGTC
TGTATATACGCTGTAGGACTTGTGTAAAACCTGTAAACCACCTCTAGGTG
TGAACAGTAAATAAAAGCTGCATAAGACCGGACTGTAAGGTTTGATCCAC
TCACGCCAGATGAAGAGAGACTTTGTGTTCACTGCTAGTCTCTACACGCA
GGACTTCAAGGATTTGATTTTGTTCTATTCAAATTGAAATGACGCAATGC
TATTGGCTAGTTTTGCATGAAGTACAAAATGACTAATAAACTTGTGGACA
TACCGATTGATAAGTATCTAATGCCAGCTCAGAAGAGGACTAGAAATAGT
CATGCTTTTAAGTACCAGATCTAGAGTTATCAACCAAAGATTGATGTGTT
CAAAAATTTGTATTACCCAAGAACTAAAGTAGAATGGAACTCGGTGTCAT
CAAGTACTGCAAGAACATCTTCACTAAGTAGCTTCAAAGAACGGTTGCAG
TCAGATGTGCAAATACTTGGTGTAACAGGCCGTTCAGTGTAATATAACCA
GCTGCTGCGCGCCGCGTGCCTGCGAAGCTGGTGTGTTACGCCGAAGGGCG
GTTATACCGGCTATACAGATAATTTTGCGTCCAAGACTCCAAGGGACTGC
TGAAGGGGACGAAAGTTTGAACACAAATTCAGAATCTACAGTGTCTTTAT
TCAAATATTGTACATCAACACTTGAGATAAATATTACAGACATACACATT
CAATCATGTAGCAATGCCGTATGGAATCAGTGGAACATACAAGTTGGGAA
ACAGCTACTGTGCCTTTAAAAGGTGTTTGAAAAGGTAAATATGAATGAAT
GTCATTGCGCAATAATTGTACAAGGTATAAAGTAT Coding sequence (CDS) from alignment at Sc0000004:7412481..7419965+ >transcript:BL96999_cuf18 ID=transcript:BL96999_cuf18|Name=transcript:BL96999_cuf18|organism=Branchiostoma lanceolatum|type=CDS|length=711bp|location=Sequence derived from alignment at Sc0000004:7412481..7419965+ (Branchiostoma lanceolatum)
AAGTTCTCCTGCATCCACTGCACCAAGTTCAGGGAGCACTTTGAGGAGCT
GAGGGAGAACAGACAGCTGAAGGACAGACTGAACCACCTGTGCTACCTGC
TGTCGGACAATAGCCTGGCGTTGTTACCTGAGTACGAACAAAGAGTACAG
GTGCTGAAGCGGCTGCGTTACCTGGACGCGGCAGGTACGGTGCAGCTGAA
GGGGCGCGTGGCGTGCGAGATCAGTAACCACGAGCTGCTGATCACCGAGC
TGGTGTTCGAGAACGTTCTGACTGACCTTCAGCCGCAGGAGATCGCTGCG
CTGCTGTCCTGCATCGTCTTCCAGGAGAGAAGATGTGTGGAGCCTACTCT
GACGGAAACACTGCAAAAGGGCAAGGATGCGATGGTTGCCATGGCAACAC
GTCTAGCGGAGCTGCAGCGGGAGTGCGGCGTGAACGTGCAGGTCGAGGAC
TGCGTGGAGGAGCTCAAGTTCGGCCTGGTGGAGGCCGTGTTCCAGTGGGC
CCAGGGCATGCCGTTTTCCAAGATCACAGAGCTGACAGATGTGCAGGAAG
GCGTGATCGTACGCTGTATCCAGCGGTTGGACGAGACGTGTCGGGACGTT
CGCAGCGCCGCCCGCATCATCGGAGACCCGAACCTGTACGCCAAGATGGA
GCTCGCCTCCGAGAAGATCAAGCGGGACATCGTCTTCGCCGCCAGTCTCT
ACACGCAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:7412481..7419965 + |
Properties
| Property Name | Value |
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| Transcript id | BL96999_cuf18 |
| Biotype | protein_coding |
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