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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97001_cuf4 >transcript:BL97001_cuf4-protein ID=transcript:BL97001_cuf4-protein|Name=transcript:BL97001_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=283bp
LNYLLPATCCVIILTIFDLPAYTSSTNFPAVVALFLMYGWSITPMMYPVS
FWFNVPSHAYVFLIVINLFIGITATVATFMFQLFQYDKDLHAINEYMRKA
FLLFPNYCLGRGLMDLAYNEYFNEYYLKIGQEDKVKSPFDWELVTRSLVA
MAAEGLVFFIITILCEYKFFFKPKYIAVSDEPIEDEDIDVANERQRILRG
DADKDLMKLANLTKVYKTSKKNGQTPAVDRLCVAVPCGECFGLLGVNGAG
KTTTFKMLTGEIAVTGGEAFLNGHGILKDIIKV Run BLAST on NCBI mRNA from alignment at Sc0000004:4699459..4704110- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97001_cuf4 ID=transcript:BL97001_cuf4|Name=transcript:BL97001_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=4652bp|location=Sequence derived from alignment at Sc0000004:4699459..4704110- (Branchiostoma lanceolatum)
GTTGAACTACCTCCTTCCAGCCACCTGCTGTGTGATCATCCTCACCATCT
TCGACCTGCCGGCGTACACCTCAAGTACAAACTTCCCCGCTGTGGTGGCA
CTGTTCCTCATGTATGGGTAAGTACACAGGAACAAACTTTAAGATTGAAA
ATCACAATATGCACAATATGTACAATTATTTATTCAGACATATAAAAAGC
TACAGTACAAGGAGGACTGCAATGTCTTCAATTCTAAAGGCACATCATAG
CAAAACAAGCTTATAACTTTGGAAAATTTCCTGTTTGAAAATGCATGATT
AAAAATTGGACTACTCAATGAGGATACATGTACATGTACTTACTAAACTT
AAAACACTAAATCCAGCCTTTGGATGCTTGTTTTCTTTACCATATTGTCA
TACATGATAAAATTTTAGCAAACAAACGTTCCCTGAACCTGCAATTGTCT
GGAGATTGGTTTTGCGCACTTAGTTTGCCATCTCCTTGACTGTATTGTCT
AGTTCAGACTGCACTGAAAAAATGTAGATCTGAAATATCTCCTTTATCTG
CAACCTTGGCAGTTGGTCGATCACCCCGATGATGTACCCGGTGTCGTTCT
GGTTCAACGTGCCGAGCCACGCCTACGTGTTCCTCATCGTCATCAACCTG
TTCATCGGCATCACCGCTACCGTGGCAACCTTCATGTTCCAGCTCTTCCA
GTACGACAAGGTGAGATGAACAAACTACCCTGCAACCTAAGAAACAATCC
TGCAACCTTCAGTTAGAAAAACACCCTGTAACCTTAAAAACACCCTGTAA
CCTTAGAAACCTTCCTGCAACCTTAGAAACCTTCCTGCAACCTTAGAAAC
CTTCCTGCAACCTTAGAAACCTTCCTGCAACCTTAGAAACCTTCCTGCAA
CCTTAGAAACCTTCCTGCAACCTTAGAAACCTTTATTCACTATTCCACAC
ACAAAGTAAAGGGCTTAAAACTAAACTCAGCACAAAATGTTTGGAAGTTT
AAGTCAATTTTGATCTTTTAAAATTAAACCATAATTTCTCTACTGTTACT
TTATCAGCTGTGTATCATTGCAAACAGAATGATCATTCTTGATTTTGTTT
GTTTGTAAAATGACTGTCTTCTCTTTTCCAGGACCTGCATGCCATTAATG
GGTATATGAGGAAGGTTTTTTTCACTCTCTCCTAACTGCCATGAATTATA
AATCATTATCATCATGATGGTGAATGTTGTTTCTGATGTTCTTTCTGATG
TTTCTCAGGACCTGCATGCCATCAATGAGTACATGAGGAAGGCGTTCCTG
CTGTTCCCTAACTACTGCCTGGGGCGGGGGCTGATGGACCTGGCTTACAA
CGAGTACTTCAACGAGTACTACCTCAAGATCGGTACGTCTTGATTTTCAT
GTTCACTTTTCGTCTTGGCCCAAAAGACTAGGAAGGAAACACCAAACGTC
TTGACTACATTGAGAGCTTTTGGTATCATTATGAGATACATTGTAGGTAC
TTGCATTAAGCTGAGTTCAAATGCATCTATGCAGTTCTTTTGAACTTTTC
TGTGATGAAATTACATCACTCCTTATTTGATACTAGGCATTTTCCTGTAG
TTTTTAAACCATCATTGTCTGCTTAAACATGATTGTATAGGATTAGTAGT
CAGTAGTACATCAGATTCTATTAATTAGCTACTATCCTTCTGAACCCACA
ACTTTATTCTATCATGGATACCACACTTACATTGTCCTTGGTAAAAGGTG
GTCTTTCACAGCAGTTTCCCCTTGACCTTGCAGGTCAGGAGGACAAGGTG
AAGTCGCCCTTTGACTGGGAGCTGGTGACCCGCAGTCTGGTTGCCATGGC
AGCAGAGGGCCTGGTGTTCTTCATCATCACCATCCTGTGTGAATACAAGT
TCTTCTTCAAGCCAAAGTAAGTTTTTTGGAAAAGTATTCTTCCAGAAATG
ACTTATAAGTTATTATGCTGTTTTCACCTTCAAATTGTCTTTAATATGTT
AAAGGCACCCAGAGCATTTTATAAGACTTGAAAATTGAAAATATTCTAGT
TGGTGTAATCTTTATGAAATTGACAAGTAATGCCACTGTTGCCACATTAG
TGTTCGGATTTCTTAAAAAATGCGGCAAAAACGGCACAAAAATAATCTAC
ATGGTCATCTTTTAGTTTCACGCGCCTACTGTAAATACTGTACAAACAAC
AGCCCCGTACACCTCCGTCAAAACGTAGGAATTCAAATTTAAAACCTTAA
AATGCAAATATCTGATGGACATGCAGTCACTCTTTCATTGGTCGAACAGC
TTATTGTGATGGACAGTCAGGATCAGTCTATTAGGGCTTGGATTTTCTAT
CAGTTCTCACCACACAACGACATCGTATCTTTGCTCATATAATTTCGATA
TGTAATGGTATAGCGTTATTGAAACTTACTATCTGTAGGAATGATCAGAA
ATTGGAGTTTTATCAATAAGAGTTTTAAGCCTCATAAAATGCTCTGGATG
CCTTTAACACATTACATGTACATATATGGAGAGAACCATACATGAACATC
ATTCTGTTCTAACGTCTATTAACAAAAGATTGTTAAAGCATTGAAATCAG
TTTTCAGTGTGACATCATGGCTTGTTATACATTTGTAGTCTATCATATGA
CCACTGTGCTTATATATAGTTAGAAATAAAGGCTTAAAAGGACAGATAAA
GATATGAAAAGGCTTCATCAAAATCCTTTTTTGGATGGTCACTTAAAAAT
CTTCATATACGTGTACATGAACATGTAAGACTGTCATAGTGTTTGTTCAA
TTCTATTGCTATTATGAGCTGGTGTTTTGTGAGACCTGTCAAATCTGAAA
GATATTCTAAGTAATTTTTCGTGATCATGAGAGCTGTCAAATCTAAAGAA
ATATTCAATACCTACCATTTCTCTACCCAGGTACATCGCTGTTTCTGACG
AACCAATCGAGGACGAGGACATTGATGTGGCCAACGAGCGGCAGCGAATC
CTGAGGGGTGACGCCGACAAAGATCTCATGAAACTGGCCAACCTCACCAA
GGTACATTATGTAGGCTGGGCCTTAGAACAAGACTTAGTAATCTTCAAGC
AATCTATAAGTTAGACATGCCTGTTGTTTCTTCTTGCTTCATGCAATAAC
CAGTGGTCATGATATTGTAACACGCATATTTTATGGTCAAGTAACAGTTT
TGCTGCGTATGAATTTGAAACACTTCATACTGTGCATGCTTAATTATATA
GAGAAATACTTCTTGCTGTTAAAAGAGCCATTATGATAGTGTAGGGTAAT
CATTTCATTTGGTCAATAAAATTGGTCAATATTTTTATATGTATTTATCT
TTTTGATTTCCAGGTGTACAAGACCAGCAAGAAGAACGGGCAGACTCCAG
CTGTGGACAGGCTGTGTGTGGCAGTGCCCTGTGGGGAGGTGGGTGTGCTT
GTTTATGTATTTCATAATGCTGCTAGGAATATAAATCATGATAAATGTTC
AGGCTCACCACAATGGCACATGCTTTGTTCTAAGTAGTGTTGGCAGGAAG
CGTTGTCACAAAAAGTAATTTAAAAAGAAAAATGCTTTTAGGGCTTTTAA
AAAATTATGTTCTGGAACTTTTGTTAAGATTTTGAGATACCTTAAATGAG
TTTCTTGATAGCTGACTTTACCAGATGAGACACATTCTATACAGTCTAAT
TAAAATCGAAAACTAAAAATCAGCTTAAATGGTTTTAAAAAGCTAGCCAG
AGATTTGCAAGGAAATCAGAATAAATACTATCAGACAGACATTGTGTTCT
AATTGCTACCCCCCTCCCGCACCCTTCCTAGTGCTTTGGGCTGCTGGGAG
TGAACGGTGCAGGTAAAACCACCACCTTCAAGATGCTGACCGGGGAGATA
GCTGTGACTGGGGGAGAGGCCTTCCTTAACGGACACGGGTATGTTGGGTA
TAGCTTTCTTAAGACAACAACGTATGTCTTGAAATATCCGCTATCTCTGG
TCCGTAGTTAAAGTTTGTCCTTCAATAAATTATTGTAATAAAGTTTCTAA
AGATGCACTTTATATAAAACACGCCAAAAATAATTACTCAAGCAACTGGA
TAAGATTTTGAAAATCTTATCCAGTTGCTTGAGTAATTATTTTTGGCGTA
TCTTATTACCTGGATGTCTAACCTTCATCAACGCACTTTATATAAACTTA
TTAAGATATTTGAAAACCCCAAGAAATACAAAAAGTAAGTGGATTCTTAT
ATTTAACAACAATGTACATGTATTGAAACTACATGTTAATTTCCTTCTTT
CTGTCTGTAATCCTAAAAGATTTCAAAGTGCCCAAGAAAATAGCATGACA
CCTTAAAAAATCTTATTCATCTTAAAAAGGTATTTTTCTGCATTTATGTT
GAACTTCTTTTTTTCTCCAGTATCCTTAGAAAAGACTTCATCAAAGTTTG
CCACAGCATAGAAATACCTCAAAAAGTCTTTAGTTAGTTAAAATCATCTT
AACCTTCTCCCGACTTCCTAACTCTGTGACCAACAGAGAATTGGGTGCCA
AACGGCTACTTCAGTGTGCTAACAGTTAAAGCAGCTCGTCTGACATTGAC
AGTTCTCTTTTTGATTGAATGTTCCAGTATCCTAAAAGACATCATCAAAG
TT Coding sequence (CDS) from alignment at Sc0000004:4699459..4704110- >transcript:BL97001_cuf4 ID=transcript:BL97001_cuf4|Name=transcript:BL97001_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=849bp|location=Sequence derived from alignment at Sc0000004:4699459..4704110- (Branchiostoma lanceolatum)
TTGAACTACCTCCTTCCAGCCACCTGCTGTGTGATCATCCTCACCATCTT
CGACCTGCCGGCGTACACCTCAAGTACAAACTTCCCCGCTGTGGTGGCAC
TGTTCCTCATGTATGGTTGGTCGATCACCCCGATGATGTACCCGGTGTCG
TTCTGGTTCAACGTGCCGAGCCACGCCTACGTGTTCCTCATCGTCATCAA
CCTGTTCATCGGCATCACCGCTACCGTGGCAACCTTCATGTTCCAGCTCT
TCCAGTACGACAAGGACCTGCATGCCATCAATGAGTACATGAGGAAGGCG
TTCCTGCTGTTCCCTAACTACTGCCTGGGGCGGGGGCTGATGGACCTGGC
TTACAACGAGTACTTCAACGAGTACTACCTCAAGATCGGTCAGGAGGACA
AGGTGAAGTCGCCCTTTGACTGGGAGCTGGTGACCCGCAGTCTGGTTGCC
ATGGCAGCAGAGGGCCTGGTGTTCTTCATCATCACCATCCTGTGTGAATA
CAAGTTCTTCTTCAAGCCAAAGTACATCGCTGTTTCTGACGAACCAATCG
AGGACGAGGACATTGATGTGGCCAACGAGCGGCAGCGAATCCTGAGGGGT
GACGCCGACAAAGATCTCATGAAACTGGCCAACCTCACCAAGGTGTACAA
GACCAGCAAGAAGAACGGGCAGACTCCAGCTGTGGACAGGCTGTGTGTGG
CAGTGCCCTGTGGGGAGTGCTTTGGGCTGCTGGGAGTGAACGGTGCAGGT
AAAACCACCACCTTCAAGATGCTGACCGGGGAGATAGCTGTGACTGGGGG
AGAGGCCTTCCTTAACGGACACGGTATCCTAAAAGACATCATCAAAGTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:4699459..4704110 - |
Properties
| Property Name | Value |
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| Transcript id | BL97001_cuf4 |
| Biotype | protein_coding |
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