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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97005_cuf1 >transcript:BL97005_cuf1-protein ID=transcript:BL97005_cuf1-protein|Name=transcript:BL97005_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=450bp
CVRVCVCMCVRICLEGVRERSLPSLIALFVIAFSMTAFCLAAAVTVYYAD
CSPCKPPVEEVCSCKDGLLGSGETCTVCACSPDGDFRQCKASQWLAIPSS
WVLDESSGTSCSGWDWYWYCYYTVDYASRAFDGDASTAWEPLYQPDGYQH
WVILDLQTSYTIHRLSVTNAGDPVHDVTNVILESSPLWPYTWEEALSSDA
VVPGATNPQQFELHCVGRYLRLKVDTKDGTRPILAEVSLYGIENTGGSEG
LSCPTFNTGCIISDTAVAVAPPGGQSCYVTADIHEGPRGLDNPLSVHRTG
NLTLHGDLLFECGENYEVQVVWSARGYDEENPDRTMDELLLSSITTNSIH
LFIPPKTLPLGIYMIQLQAIMTVPGSGHVSVSAVQTWIELAKLPVVYSMG
SALRTVEASGDLLLRADSSYDPEEILVSSGFEYKWTCTLVYLPRRALDYY Run BLAST on NCBI mRNA from alignment at Sc0000025:5881..11667+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97005_cuf1 ID=transcript:BL97005_cuf1|Name=transcript:BL97005_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=5787bp|location=Sequence derived from alignment at Sc0000025:5881..11667+ (Branchiostoma lanceolatum)
GTGTGTGCGTGTGTGTGTCTGTATGTGTGTGAGGATTTGTCTAGAAGGGG
TAAGAGAGCGAAGTCTGCCATCTCTGATCGCCTTGTTTGTCATTGCCTTC
TCCATGACAGCGTTCTGCCTAGCCGCAGCTGTGACAGTTTACTACGCGGA
CTGCTCGCCCTGCAAGCCGCCTGTAGAAGAGGTGTGCTCCTGCAAGGACG
GACTCCTGGGCAGCGGGGAGACGTGCACAGTCTGCGCATGCTCACCGGAC
GGGGACTTCAGACAATGCAAGGGTGAGTCAGTTAGTTACTTCCTAAATCA
TACTATGCTACCTGTCACACCGGCATTAACACCATTGGAACGTCGTTGTT
TTTCTTCTATAGTTAATTCTATCCTTGATAGGCCTTATTAGGATATAGGA
ATAGAAACTACTACATTCACACTACTTAGTACTTGTCCATTTTCTCTATC
AGTCAGTCTAGAAGATAAGACTTACTACGCAAATACTAGTACGGCAATAC
ACAAATCAGGTACAAATTCAATTTCAGGTACATGTACAATTATACAATTA
ACGTCCAAATATAGTTTATGTCCAGGCATCTAATTTGGTGGCCTGCTTGG
CAGCATTGGCGGCGCGTCGTGGGCATGCGCGTTCGTCCTCCCGGCCTTCC
TAGTCTCTGTGCACAGCCTCGAGCTCGGCGCCCTTGTGTATATCCTCGAC
GCCCTTCCCAACCACTCTGCCAACCACCCTGCCTATCGTTCGCCACTCCA
GCTGCTGTAGGCTCATACTGTAAATGCAGAAATGTTCGCGGTGGTTTTAT
ATTCGCGTTTTTCGCGGTAAGCTCTTCGTCACGAACTTAAAACCACTGCG
AGCATTTTTTTGCCGCAAACTTAAAGACAGTACCCGTCAGGCCAAGGCGA
CGTTTCAAAATGTTCTTCAAGCGCAGTTCAGGTCGGTCACGGGGCCTTGT
CCCCTCTTTCAGTTCAGAAAACAATCGACCTACAGTGGCAACCGCACGTA
GCTGTATTCAGAAATGTTCATATCAGTCCGCTGAGTATTTTGAATAACGA
TTTTACACATGAAGTAAAGAAAGGAACAGTGAGTTCGTTTTATTTGTAGC
GCCTTCAGGGAGATCCTTTATATCTAAGTCTAAAACTAAGTCCTTTCTGA
CTTCTGCTTTGCTACTGATGATGTATTCTACTAATGTCCGTNCCTTCAAG
GAGATCCTTTATATCTAAGTCTAAAACTAAGTCCTTTCTGACTACTGCTT
TGCTACTGATGATGTATTCTACTAATGTCCGTCTTTTCGTGAACCAATAG
GCCATTATACTGATAACCTGCAGTGACAATCGCACGTAGTTCTAGGCAAC
TGCAACACTCCGATACACGATTTTACGCAAGAGAGGAGCAATGTATTTAC
TGTATTTGTAGGTAATGAGTGTGAATAAGGGGGGAGGGTCTACCATTTCT
GCTTGCCTTGTTTTCTTAGGCCCCCATTCCACTAGACGGTGATCGCGCTG
CAACTTCGCTGTGACCTACATTGTAGCCCTTGACTGTATAGTTTGCATAT
CAGGCAAAATGTAAAAGTTTGACTGAAAAGACAGCAACACACACAAAGCG
TAAAAAGATTAGTCTTTTTATTTATGAAATTCGTTGAGCTCTATGTCAAA
TTNCTCTCTGTCAAATTTCAGGTCGCAGGGCAGTTGCAGCGCGGTCGCAA
CGAGCCCTAGTGGAATAAGAGAACTCCTATATTTTTTTGAATATAGATTA
TCATTTATTTTTCTCGCACCAGCGTCTCAGTGGTTGGCCATCCCGAGCTC
CTGGGTTCTGGACGAAAGCAGTGGGACGTCCTGTTCGGGCTGGGACTGGT
ACTGGTACTGTTACTACACCGTGGACTACGCCAGCAGAGCGTTCGATGGC
GACGCGTCCACGGCGTGGGAGCCCCTGTATCAGCCCGACGGGTACCAACA
CTGGGTCATCCTGGACTTACAGACCAGCTACACGATCCACAGGCTCTCCG
TTACCAATGCGGGGGATCCCGTCCATGACGTCACTAACGTCATTTTGGAA
AGGTAGCTGTTGTCGATATGTTTGTAGTCACGTGACGAAACTAGCGTCCG
CCATGTTGGTGGGTTATGGTACGTTTGCACTCATGTGATTTTGACGTAGT
ATAGTGTCTGCCATGTTGATGGATTATACCATGTTTTCTATCACTAACTA
TGACGTAATTTAGCGTCCGTCATGTTGGTGTATTGTAATATGTTTGCAAT
CACGTGACTGTGACGTATTTAAGCGTCCACCATGTTGTGTATTGGAATAT
GTTTGCAGTCACGTGACTGTGACGTAATTTGGCGTCCGCCATGTTGATTA
TTGCATTACGTTTGTAGTCATGGCATAGGCTGTAGGCCTCGGAAGGAGAG
TTTGATTGGAGAGTTTGATTGGCCCGAAAGCCGCCCTCGCCCGAAGGGCG
CGCGGATCCCGAACTTACCCGACGTAATGAAGTCGCCCGAATTCCGCCGG
AAGCGCGCGCCCCCGAAGCGCGCCCGAAGGGCGCGCCCCGCCGAAGCGCG
CCCGAAGGGCGCGCCCCGTGGCGCCGCAGGCGCCAAGAGCTCAGATTTTT
TGAAGTTAGCTTCCCCGAGCGACTTTCGCGCAAGGGACGACGGGAGGCCG
ACGGGTATTTGCATAACTACCGACCGGGAGAGTCTTACGCAACTGCTCAG
CGGGGAAGAAAACTCGCTATTGTTTATTGAGTCCGCGGAGCTGAGGCCAA
ATGCCCATGGTTCACCNTTTATTGAGTCCGCGGAGCTGAGGCCAAATGCC
CATGGTCATGGCTTGTCCTTACAAATGTGTATGTTTTGATAGGCGCTTTA
ATACTTACTTATATTCAAAATGTCTTAAAGCGACTCCTAGTGCTTGTCTG
ACCAAGTCTTGCATTTCCCAATTGAAGCTCTCCCCTCTGGCCATATACTT
GGGAGGAGGCCCTAAGCTCGGACGCGGTGGTACCTGGCGCCACCAACCCA
CAACAGTTCGAACTCCACTGTGTCGGCAGGTACCTGAGGCTCAAAGTGGA
CACAAAAGATGGAACAAGGCCGATTCTTGCAGAGGTGTCCCTCTACGGAA
TAGGTAGATGTCTGTCAACATTCGTCCTAATATAGAAAGNTCTACGCAAT
AGGTACATGTCTGTCAACATTCGTCCTAATATAGAAAGAGATGATTTTAC
CTTCGCCAAGAAGGTTATATTTTTGGTTTATATGTATGTATGTGTGTATG
TATGTATGTATGTATGTATGTATGCATGTATGTCACAGTGTAGAAGACCA
GCATAACTCAAGAAGGCCTGGATGGATTGTCTTGATATTTAGTATGGGGG
TAGGTCTTGATGAGACCTGGGAATGGTTAGATTTTGGCCCCCTAACGGCT
TGTTTTGTATGGTTTCAAACATTCACGTGAATGCGAAGACCAAGCAAAAT
AAAAAGCAAGGATCACCATCGATCGAAATCGTATCATCGGTTTACTTTAA
AATCACAATTATTACTTTGAAAACATCTCATCAGAACAACAAACGTGTCG
TGTTAACGAGAACCTTTATAGCATACTGAATTCTCCGTGTACTACAGAGA
ACACAGGTGGTTCTGAGGGGTTGTCTTGTCCCACCTTCAACACGGGCTGC
ATCATCAGTGACACAGCTGTAGCAGTAGCGCCCCCTGGCGGCCAGAGCTG
TTATGTCACCGCTGACATTCATGAAGGACCTCGAGGGTATGTTTTCGTTT
AATGTAATCAATCAATCATCCAACCAACCAACCAACCAACCAACCAACCA
ACCAACCAATCAATCAATCAATCAATCAATCAACCATCTATCTATTTGTC
TATCTATCTATCTATCTATCTTTCAATCTATCTATTTGTCTATGTATCAA
CGCAAATGTAAATCATGAGAGTGTTGCTTAAAATGAATTTCCAATTCTTA
TCATTCAACGTTTCAATTCAGTATTAGATAGTAACATACACATTTTTAAA
GATGAAAAATGGAAACATTATGTTCATCTTATTTTTTCTCTTCTAGTTTC
ATCTGATTCTATTTGTTTGTTTGTTTCTTCTCCAGTCTTGACAACCCCCT
GTCCGTGCATCGTACCGGTAACTTGACCCTCCACGGTGACCTGTTGTTTG
AGTGTGGAGAGAATTATGAGGTAAGACACGAGCAGACGATGAAGTACGGT
AAATGTTAAAACTTTCGCGGTGGTTCAATGTTCGCAGTTTTCACGGTGAA
CTCTTCACTGACAACTTAAAACTATCGCGAAAATGATTGTTCTGTATTCG
GTCCGCCTAGCCCATTGTTTCAATCGCTAACAACATTTTCTCCCTACTAC
AACATTAAATCCTCGAGAACTTTTTTGTACATAGATTTCTTCATCACAAG
TGTTGTTTAGTTGGTTTGTCCGTGCGTATATATCTCTCTCTCTCATGGTG
ACCAGCCCCTCCAGCTCTGTCCTGCCACTTGCTACATTATGTAATTGAAC
ACCACAGGGTGTCTGCTACTTTTACGTTACTAGTAACCATGGTGACAGGC
GTCTAGTTCAGGTCATTGACCTGATTTATTTGGAACTAAAGAAGAAGAAG
AAGAAACGAGAGCAAAAACCACAGTGTTTCCCTCCCGTGAAGGTAAACAT
AATAACATTATTGATATTGTAATGACAACTCCTTTAGGTACAGGTGGTCT
GGTCAGCAAGAGGTTATGACGAGGAAAATCCAGACCGAACAATGGATGAG
CTTCTACTCAGCAGCATCACTACAAACAGCATTCATCTTTTCATTCCACC
AAAGACTTTGCCTCTCGGAATATATATGATACAGGTATAGTTTTCAACGA
AGCGCAGTATGTGCATGCATGTGTGTGCGTGTTTAGTGTAAGTATGTGTG
TTGTATGTATGTACAATGTATGTCTGTGTGTCTCTGTGTCTCTGTGTTTG
TGTGTCTGTATGTATCTGTGTGTGTCTGTGTTTCTTGCGTGTATCTGTCT
TGTATGTATGTTTGTGTATGTAAAATAAATACAACTTTATTGCACGAAAA
TTGTACATGGTACAAAGTATGGCAAGAATTCGTAAACATGATACAAAGTA
GAAGTATAGAAGATCCTAATTACCAATACAATAAGGGCTCTGTGTGTGTG
TGTGCGTGTCTGTGTGTGTCTGTATGTATACGTATATGCGTGTGTCTGTA
CTGTGTACATCTGTGTGTGTCTGTGCGTGTGTGTCTTGTATGTATGTATG
TATGTATGCATGTATGTATGTATGTATGTATGTCTGTATGTTTATACGTG
TACGTTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGCCTTGTGTATGTGTGCACCAGGCTTCACCTCAATA
GAAGACGACTGTTTTACCTACTTACATATGCTTTTGATATGACTGTATTG
TCAGCTGCAAGCCATCATGACCGTGCCAGGCAGTGGCCATGTCTCCGTCT
CCGCCGTTCAAACGTGGATCGAGCTCGCCAAGCTGCCCGTTGTGTACAGC
ATGGGCAGCGCTCTGCGCACGGTCGAAGCTTCCGGCGACCTCCTGCTTAG
AGCCGACTCTTCCTACGACCCAGAAGAGATCTTGGTTTCCAGCGGGTTTG
AATACAAGTGGACCTGTACACTGGTGTATCTTCCACGTAGGGCACTTGAT
TATTATTGATATTATGATTTTTATTACTTCGGTCTTGACAGACAAGGACG
ACGTGGCACTGCACTCAAGTTTTGACGGCCCGACTCA Coding sequence (CDS) from alignment at Sc0000025:5881..11667+ >transcript:BL97005_cuf1 ID=transcript:BL97005_cuf1|Name=transcript:BL97005_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1353bp|location=Sequence derived from alignment at Sc0000025:5881..11667+ (Branchiostoma lanceolatum)
TGTGTGCGTGTGTGTGTCTGTATGTGTGTGAGGATTTGTCTAGAAGGGGT
AAGAGAGCGAAGTCTGCCATCTCTGATCGCCTTGTTTGTCATTGCCTTCT
CCATGACAGCGTTCTGCCTAGCCGCAGCTGTGACAGTTTACTACGCGGAC
TGCTCGCCCTGCAAGCCGCCTGTAGAAGAGGTGTGCTCCTGCAAGGACGG
ACTCCTGGGCAGCGGGGAGACGTGCACAGTCTGCGCATGCTCACCGGACG
GGGACTTCAGACAATGCAAGGCGTCTCAGTGGTTGGCCATCCCGAGCTCC
TGGGTTCTGGACGAAAGCAGTGGGACGTCCTGTTCGGGCTGGGACTGGTA
CTGGTACTGTTACTACACCGTGGACTACGCCAGCAGAGCGTTCGATGGCG
ACGCGTCCACGGCGTGGGAGCCCCTGTATCAGCCCGACGGGTACCAACAC
TGGGTCATCCTGGACTTACAGACCAGCTACACGATCCACAGGCTCTCCGT
TACCAATGCGGGGGATCCCGTCCATGACGTCACTAACGTCATTTTGGAAA
GCTCTCCCCTCTGGCCATATACTTGGGAGGAGGCCCTAAGCTCGGACGCG
GTGGTACCTGGCGCCACCAACCCACAACAGTTCGAACTCCACTGTGTCGG
CAGGTACCTGAGGCTCAAAGTGGACACAAAAGATGGAACAAGGCCGATTC
TTGCAGAGGTGTCCCTCTACGGAATAGAGAACACAGGTGGTTCTGAGGGG
TTGTCTTGTCCCACCTTCAACACGGGCTGCATCATCAGTGACACAGCTGT
AGCAGTAGCGCCCCCTGGCGGCCAGAGCTGTTATGTCACCGCTGACATTC
ATGAAGGACCTCGAGGTCTTGACAACCCCCTGTCCGTGCATCGTACCGGT
AACTTGACCCTCCACGGTGACCTGTTGTTTGAGTGTGGAGAGAATTATGA
GGTACAGGTGGTCTGGTCAGCAAGAGGTTATGACGAGGAAAATCCAGACC
GAACAATGGATGAGCTTCTACTCAGCAGCATCACTACAAACAGCATTCAT
CTTTTCATTCCACCAAAGACTTTGCCTCTCGGAATATATATGATACAGCT
GCAAGCCATCATGACCGTGCCAGGCAGTGGCCATGTCTCCGTCTCCGCCG
TTCAAACGTGGATCGAGCTCGCCAAGCTGCCCGTTGTGTACAGCATGGGC
AGCGCTCTGCGCACGGTCGAAGCTTCCGGCGACCTCCTGCTTAGAGCCGA
CTCTTCCTACGACCCAGAAGAGATCTTGGTTTCCAGCGGGTTTGAATACA
AGTGGACCTGTACACTGGTGTATCTTCCACGTAGGGCACTTGATTATTAT
TGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000025 | genome | Sc0000025:5881..11667 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97005_cuf1 |
| Biotype | protein_coding |
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