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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97008_cuf0 >transcript:BL97008_cuf0-protein ID=transcript:BL97008_cuf0-protein|Name=transcript:BL97008_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=554bp
NVDLVFLLDGSGSVTETNFQRIKDFAKDLIQEFNINSQNGTRVGAVQYSS
KIREEFKLNRYNTSAEVMSAIDGIRYMRGGTYTGAALRYLPDNIFTAAAG
DRPDRANIVVLVTDGKSYDSVVTPATTLRNKRVQLYAVGVGRAEYATLMA
IAGDSEYVYQVGSFANITNLTSSVQEDLCGDKSCLEKPCHNGGTCESQGQ
DFFCRCPSGFTGQYCEICNSVSAGWGQCSLYGDPHYRTFDGKNSDFLGTC
TYIFVRDKTTAGTPLFSVEVDTEYEAGSTKTSYARTVHVDVYGHRISLLN
GSSVTVDDNPVTLPTQLGPSKQVLVEYLGSSMVVRTVFGLQVGYDGNDEV
WVRLTTCFKSKVEGLCGNFNDDSNDDAMTSSGTQAATTTALLTSWKVATN
DSCSVGGDATPSVCSFINFAVSQQAFRCSLLGNQAFNPCHATVPFNGYYL
DCVSDVCTANTGSVTELCNSFEAYGRRCGRANVTLPTDWRTAMTSQQIDC
RVTCPSARNFTYSQCVKDCEPTCILPQGPPGCDNTVCLSDGCVCESGLLR
SGDS Run BLAST on NCBI mRNA from alignment at Sc0000025:1301440..1305590+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97008_cuf0 ID=transcript:BL97008_cuf0|Name=transcript:BL97008_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=4151bp|location=Sequence derived from alignment at Sc0000025:1301440..1305590+ (Branchiostoma lanceolatum)
AAACGTGGATCTGGTCTTCTTACTGGACGGTTCCGGAAGCGTCACAGAGA
CCAACTTCCAGCGAATCAAGGACTTCGCCAAAGATCTCATACAGGAGTTC
AACATAAACAGCCAGAACGGCACCCGGGTGGGGGCAGTCCAGTACAGCTC
CAAAATCCGTGAAGAATTCAAGCTGAACCGATACAACACGTCGGCTGAAG
TCATGAGCGCCATTGACGGAATCAGGTACATGAGAGGTGGTACGTACACG
GGCGCCGCCTTGCGATATCTGCCAGATAATATCTTCACGGCAGCCGCAGG
GGATCGTCCCGACAGGGCGAACATCGTGGTCTTGGTGACGGATGGGAAGT
CGTATGACTCCGTGGTGACGCCGGCGACGACCCTGAGGAACAAACGTGTT
CAGTTGTACGCTGTCGGCGTGGGGAGGGCCGAGTACGCTACCCTGATGGC
CATCGCTGGAGACTCCGAGTACGTCTACCAAGTCGGCAGCTTCGCCAACA
TAACCAACCTGACATCGTCAGTACAAGAGGACCTTTGCGGTAAGTGGATT
ACATCACATAACCATTACCTTTGCCAACGTTAAATTGGCAAGTGATTAAA
CCCGTCAACTTCAATCTATATTCAAAACCGACCTGCATTTGATACCTTTT
AATTTTTTTAAAAAATTCAATGCAAATTCAAAAAATGTAATGCAAATTCA
AAAAATCCAATGCAAATTCATAAATTCAAGGCTCGTCAAAAGTTGCCGCA
CCGTGATAGCCTCTGGAGCTAAAAAGTAGACACCCACTTGTCGGTCATTA
CGATCCATACACTAACCTCCTCCCTATGTGTTATCAGGGGACAAGTCTTG
TCTGGAAAAACCGTGCCACAACGGTGGGACGTGTGAGAGTCAAGGGCAGG
ATTTCTTCTGCAGGTGTCCTTCTGGATTCACTGGCCAATACTGCGAAATC
TGTAAGTCCATCCACGATCTGTATTACCCTGAAATGACATATATGAAATG
AAATATATATGACGCGTGTCATCTTATAATCACTGATGTTGCGTTTAAGG
AATGCCGCAAGTTATAGATCTAAAATTAATTTGATGCAACAGACTTTTTT
CTACTTGAGGCACGATGCCGAATCGGATAAACACTTACATCATGGTAAAT
GTGAAGTGGGCCGATCATTCTACCTTGTAGAACCGCACCAAACTTTTTCT
TTTGTTTCTTCTCACATACGTTTTCAAGGACGTTTGTGTGACACTATATA
CAGGATAACACTTTGTCAAGAAGCTATGAATGGATATCCGTATTTCACCG
ATTCCGTTGTTGTTGTTTTGACAGGTAATTCCGTCAGTGCGGGTTGGGGA
CAGTGTTCTCTCTACGGTGACCCTCACTACAGAACCTTCGACGGCAAAAA
CTCGGACTTCCTGGGGACTTGTACCTACATCTTCGTCAGAGACAAGACGA
CCGCAGGGACCCCGCTCTTTAGTGTGGAAGTGGACACGGAGTACGAAGCC
GGTAGTACCAAGACGTCATATGCACGAACAGTTCATGTAGATGTGTATGG
ACACCGCATATCACTGCTCAATGGATCATCTGTGACAGTAAGTTAACATA
CATATATCCGCGTAACACAAAATCCTGATATCCTGATACACTTTTTTTTA
GGGGCGGGGCGGGGGTATTAGTTGGTGGGCCTCTTTACGTACAGTTTGAT
TAGACTACAGAAAATGCTACGTTTATGAAGGTTAGACATCCAGGTTAACA
ATATATAAAGACGATTCAATATTCAAACTCTACAATACTCTCTTGTAGAG
TTTGAGTTGTCTTTATATACAGAAAATCCGCTGTTCAGAGAAGCGATGAG
GTTAGTGCTTATCCATCTTAACGATCAATTGGAATGATACTTCCATGCTC
CTAAAATGGCACATTAAAGCATAAAGGAGTTAAAATGATTACAGGAATAA
CACATTTTACTGCCATCTAACATAAAGCCAAAAGTGGGTCAATTACCAAC
CCTTGCGGCATCCCCACCTAATTCAACGGAAACCGTCTCTTGCTAGGTTG
ATGACAATCCCGTCACTCTACCAACCCAACTCGGTCCCTCCAAGCAAGTC
CTGGTTGAATATCTCGGATCATCCATGGTCGTGCGTACAGTATTCGGGCT
ACAAGTTGGGTACGACGGCAATGACGAAGTTTGGGTCCGCCTCACGACGT
GCTTCAAGTCCAAGGTTGAGGGACTCTGTGGAAACTTCAATGACGATTCG
AATGACGATGCTATGACGTCATCTGGTACCCAGGCCGCTACCACCACTGC
CTTGTTGACGAGCTGGAAAGTTGCTACCAATGACAGGTACTGTCTCAAAA
TATGTCTGGAAGGAATTTAAATCTAGTATTGCACTGTGGAATTTTCACTG
TATTTGCCCGTAGTAGTTGTACGGGAAGAACAGTGGCAATGCGTTTGCGA
TAGTGTGTGTGTGCGTGTGTGTGTGTGTGCAATTATCATAAATGGGGAAT
GATTCAAAAGGACAATAGAAAAGCTTTCCAAAGTTATGAAAGACACTGCT
CATCATAAAAACAACAACGGAATTATAATCGAAGTTAATTTCGGCTTAAT
TTTTCTCTCGACCCACTGGCAGACATTGATCAGTCATTGATCATAGTATA
TACCATTGTGAAGGGTTATAAAGTATTTCTAAAGCTTCGAAATGATAAAC
ATGTATGAATATATGGTATATGGTAATATGAGCATTCAATAAAGCAACAA
TGGAATATCATGATACTAGTAGACAGAAATGGATTTTGTTCGGTTCAGAT
ATGTAGCGTTATATCCTTGCACAGCCCTCAACGCCAACCACACGTCGCCA
ATGTGTTTTTAACATTTACTCTTATTTACAGTTGTTCAATGGTGTACACG
TCCATGTATAGTGCAATCATTAAAATAACAATGGAAATATGATAGACCGA
AATCAATTCTTTTAGGTTTATACGTGTAGCTTTATACCTTTGCATGGCCC
TCAACAGCAACCACACGTCGCCAAAGTGCATTTTTACAACCTGCCCTTGT
TTACAGTTGTTCGGTGGGAGGTGACGCGACTCCATCCGTCTGTTCGTTCA
TCAACTTCGCAGTCAGTCAGCAAGCCTTCCGCTGCTCGCTTCTCGGCAAC
CAGGCGTTTAACCCTTGTCACGCCACCGTCCCCTTCAACGGGTACTACCT
GGACTGCGTGAGCGATGTGTGCACGGCAAACACTGGGAGCGTGACCGAGT
TGTGCAACAGTTTCGAGGCATACGGCCGACGATGTGGACGGGCAAACGTC
ACGCTGCCTACCGATTGGAGGACCGCCATGACTTCGCAACAAATAGACTG
TCGTAAGTGGAGAAATTATTCACGGAGAATTGAAGTGAATTTTCTGTCAG
AAGTAGTGTAGATTGACCTACCGCCGTTTCGGTGAACGGTCTGCCATCTT
CCTCAGGGTGATACTACTTGTAGTTGTTACAGTTACTGTAATGTTCTGCT
TCGTACTACCGCTAGGTGTCGCTGCTGCAGCGTGAAGAATAATGCGGTCC
CAAACGTGACTCATGAACCGGGATGAGTGGAGATGCAAGCTGTGTCACGT
TTGGGACCGCATTCTTCAATTCTCAGTGATTTATCAACCTGATGAAACTA
TTCACAGAAAATTCAAGGGTAACCAGTCAATCCTTCTAACCAAAGGTTAG
CTGTTGGTTTCTAGAGGAAGTGAATAACTTTCGAGTCCCCTAGCAACAAT
CTTTGGAACTGCAGCTGTGTATTTCTTGGTGTTATAGTTAATCCAGGAAT
ATTTGTCACAGAAACGTGTTCTACCCTGCGAGCAGTACACAATATAGATG
TTATTTGGGACGGTTGGAAGGTCTCTAGATGTCCCAAAATACAATGAAGT
TAACCTATGATTCTGCACTGAAATGCATCTGCCTTCATGTTGTTTTCTCC
GTGATGTCATTCGAAAACACTTTATTCCTATCTTTCAGGCGTAACTTGTC
CATCGGCAAGGAACTTCACCTACTCTCAATGTGTGAAGGACTGTGAGCCA
ACCTGTATACTGCCCCAAGGACCGCCGGGGTGTGACAACACCGTGTGTCT
GTCGGACGGGTGTGTGTGCGAGAGTGGACTACTCCGCAGTGGGGATAGCT
G Coding sequence (CDS) from alignment at Sc0000025:1301440..1305590+ >transcript:BL97008_cuf0 ID=transcript:BL97008_cuf0|Name=transcript:BL97008_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1662bp|location=Sequence derived from alignment at Sc0000025:1301440..1305590+ (Branchiostoma lanceolatum)
AACGTGGATCTGGTCTTCTTACTGGACGGTTCCGGAAGCGTCACAGAGAC
CAACTTCCAGCGAATCAAGGACTTCGCCAAAGATCTCATACAGGAGTTCA
ACATAAACAGCCAGAACGGCACCCGGGTGGGGGCAGTCCAGTACAGCTCC
AAAATCCGTGAAGAATTCAAGCTGAACCGATACAACACGTCGGCTGAAGT
CATGAGCGCCATTGACGGAATCAGGTACATGAGAGGTGGTACGTACACGG
GCGCCGCCTTGCGATATCTGCCAGATAATATCTTCACGGCAGCCGCAGGG
GATCGTCCCGACAGGGCGAACATCGTGGTCTTGGTGACGGATGGGAAGTC
GTATGACTCCGTGGTGACGCCGGCGACGACCCTGAGGAACAAACGTGTTC
AGTTGTACGCTGTCGGCGTGGGGAGGGCCGAGTACGCTACCCTGATGGCC
ATCGCTGGAGACTCCGAGTACGTCTACCAAGTCGGCAGCTTCGCCAACAT
AACCAACCTGACATCGTCAGTACAAGAGGACCTTTGCGGGGACAAGTCTT
GTCTGGAAAAACCGTGCCACAACGGTGGGACGTGTGAGAGTCAAGGGCAG
GATTTCTTCTGCAGGTGTCCTTCTGGATTCACTGGCCAATACTGCGAAAT
CTGTAATTCCGTCAGTGCGGGTTGGGGACAGTGTTCTCTCTACGGTGACC
CTCACTACAGAACCTTCGACGGCAAAAACTCGGACTTCCTGGGGACTTGT
ACCTACATCTTCGTCAGAGACAAGACGACCGCAGGGACCCCGCTCTTTAG
TGTGGAAGTGGACACGGAGTACGAAGCCGGTAGTACCAAGACGTCATATG
CACGAACAGTTCATGTAGATGTGTATGGACACCGCATATCACTGCTCAAT
GGATCATCTGTGACAGTTGATGACAATCCCGTCACTCTACCAACCCAACT
CGGTCCCTCCAAGCAAGTCCTGGTTGAATATCTCGGATCATCCATGGTCG
TGCGTACAGTATTCGGGCTACAAGTTGGGTACGACGGCAATGACGAAGTT
TGGGTCCGCCTCACGACGTGCTTCAAGTCCAAGGTTGAGGGACTCTGTGG
AAACTTCAATGACGATTCGAATGACGATGCTATGACGTCATCTGGTACCC
AGGCCGCTACCACCACTGCCTTGTTGACGAGCTGGAAAGTTGCTACCAAT
GACAGTTGTTCGGTGGGAGGTGACGCGACTCCATCCGTCTGTTCGTTCAT
CAACTTCGCAGTCAGTCAGCAAGCCTTCCGCTGCTCGCTTCTCGGCAACC
AGGCGTTTAACCCTTGTCACGCCACCGTCCCCTTCAACGGGTACTACCTG
GACTGCGTGAGCGATGTGTGCACGGCAAACACTGGGAGCGTGACCGAGTT
GTGCAACAGTTTCGAGGCATACGGCCGACGATGTGGACGGGCAAACGTCA
CGCTGCCTACCGATTGGAGGACCGCCATGACTTCGCAACAAATAGACTGT
CGCGTAACTTGTCCATCGGCAAGGAACTTCACCTACTCTCAATGTGTGAA
GGACTGTGAGCCAACCTGTATACTGCCCCAAGGACCGCCGGGGTGTGACA
ACACCGTGTGTCTGTCGGACGGGTGTGTGTGCGAGAGTGGACTACTCCGC
AGTGGGGATAGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000025 | genome | Sc0000025:1301440..1305590 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97008_cuf0 |
| Biotype | protein_coding |
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