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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97013_cuf7 >transcript:BL97013_cuf7-protein ID=transcript:BL97013_cuf7-protein|Name=transcript:BL97013_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=631bp
AADIRRRFEVIAQEGEVGPRAFTVKNATTTNFKRDASISSTTSAVLTQSW
SVQLTNKTSQEYRRLTQQIEDEISIILVQNAGFKRVNVKEYKQSSDGKVE
VTTRVTIAPYALLETQSSFLEATKTGQLGTIQVLNTSATIVEDVSQSATS
SMVVTEEWNPQLQNTDSVVYKELKTKIEQTLLVNLLQTPGFQNVEVANFM
KTESNQTQVVVRIISTADTLKETQQTFVRLVEKNQLKGVTVSTTSATTRR
DVASSTSAFLTLSEQMWTTDLLNTSSSVFVTLKERVEDGLTEQIANTLGV
QRIAVTGFHEEKGKTVVDVKIIKADYATEEVRQAFTAVVQSGSILGVAVN
KTTAMIENDVITSSTASLVLKTEKWTANLTDEKSLQFVALASKVEDQIRT
VLVPTVGFLEANIVQFRQSDTNVEAIVAILKSDYATNEVRTAFTTAVSDG
TVGTLQVNSSTVGYKTDVGITSTVSLVVKQEWNEDLANVSSVAYKNLEKR
VEKGFFQALITTVGFQRVEVSRFAREMNQTRAKIRVLSADYATAKVQATV
LEVASTGQVGTLPVDPASVEIKRDVSTTTTASFVLSQNFNPKLTNKTAEY
QVLKKKVELELLEVLVDQDIGFKQVDVSEIK Run BLAST on NCBI mRNA from alignment at Sc0000025:1349935..1357334+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97013_cuf7 ID=transcript:BL97013_cuf7|Name=transcript:BL97013_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=7400bp|location=Sequence derived from alignment at Sc0000025:1349935..1357334+ (Branchiostoma lanceolatum)
GCGGCGGACATCAGGAGACGGTTTGAAGTCATTGCACAAGAGGGAGAGGT
TGGACCAAGGGCTTTCACCGTTAAAAACGCTACCACTACCAACTTTAAGA
GAGATGGTTAGCATTTTGACATTTGTTTTACAATGCACTAAAGTTTTTAA
TTTGTATGATGCGTGTTTTATTATACACTTACTTAGACCCCATTCATATC
TGGATTTGTGAATAAGGATTAACCCTGCCACGGAATTTATCCTGATTCGA
TCCACCGAATCAATCGCTCATACCAAGCTTCGCGGATCAAGATCAATTCC
TTGCCTGGGTACATTCTGTTTCGTTTTACTGTATGATTATTGATGCCAAG
ACTCAGTTTTTGTTTTCGTTCTGATCTTTTGTATTCAGCAAGCATCTCGT
CCACAACTAGCGCAGTCCTCACACAGTCATGGTCTGTTCAACTTACCAAC
AAAACTTCACAGGAATACAGGAGACTGACCCAGCAAATAGAGGACGAGGT
TTGTATCATCTTAACATTTCACGTTGTTAGAGATAGTTTTAACTTAAGGA
TTTTTTTTTTAAATTTCTAAACTAGTATTCTTTAAGAATGTTCGTACCAA
GTCAGTGTCAGTAATTTCGATTTGCAAGGACAGTGCAGGAAATACTGTCC
GCCAAATTGTTACAACCACCAGTTTAGCTGGAGATTATTCAAGAACAAGT
AATAACATACTGGACAGACTTTATTTAACTTCCCTTTGTTTGTTAGTGTA
CAAATGTATGCACTTACATTTGTAGACTATTAGGTTACAGTATGATTTAG
CAGGGGGTGGTTATATGAGGCTAGTTACAGAAGAGAACTCGTGTAAGATT
ATTATTACGTTCACTGGATGTCAACGTAATAATAGTCAATCTTTCAGCAC
CAAGGAGAGTAAATAGCCATTGGCTCTATTTCTAACTGCATGTATATTTA
TGATTTTGCTTCTTTCAGATATCCATCATACTTGTTCAGAATGCTGGATT
TAAGAGAGTCAATGTCAAGGAGTACAAACAAAGGTAAGACTGTTTGAAAT
CATTAGTCCTGAACTGTGTCCTGCCTTGTCACACTTTAAATGCTTCCTTA
ATTGTGTTATTCTATGTATTTTATACATTCTATACATTTGTTTCGAACTC
AAGTTGAGCATCATTTACCTACAATTCTTTGAAATGAAATTGTTGCACCT
TTTCAATTGCAGAGGGATTCCAGCATTGATGTTTATATATATAGCGAGAA
ACAAAGAAAGGGAATTGAATTTCGAACTTTAATTTCGAATCTTGTTGGCA
CATTTAATTTTTCTCATAGTTCTGATGGCAAGGTGGAAGTGACCACCAGG
GTAACCATCGCTCCTTATGCCTTGTTGGAAACGCAGTCATCCTTTTTGGA
GGCTACAAAAACAGGACAGTTGGGGACAATCCAAGTTTTGAACACATCAG
CTACTATTGTTGNTTTGGAGGCTACAAAAACAGGACAGTTGGGGACAATC
CAAGTTTTGAACACATCAGCCACTATTGTTGAAGATGGTAAGATGAAATG
ACATTTTGCTTATTTCCCTTCGTTTTTCATTTACTGTTTGGCAACTATTT
TTACTTATACTCTCGTATAGATCGTTTTGTTTACAAACATTGTGACTGAA
AGAAAACTAAAAGTCTAGAAAAGACTCTAATCTTACCTACCATTTTTGTT
TCAGAATATTACCTCTTTCGCTGAGCCATATTGAACCTTATTCTCTCTCA
ATATGATCATGTCAAAATATGATAAGCTGGCTTTTGAAACTTCATTTGAA
TCCTTACTGAGAAGAAAAGCTTCCACTGCAATCAATAAGAATGATGATTT
TGATTTCATTAAATGCTAAGTGTTGTAATATTCATATAATCTTTCTAACT
TCAGTGAGCCAGTCTGCAACTTCCTCCATGGTTGTGACTGAGGAATGGAA
CCCACAACTTCAGAACACAGACTCAGTGGTCTACAAGGAACTCAAGACTA
AAATAGAGCAAACGGTAAGTTATGCATATATCTGAACACCAGCTTGGGCA
AAAACCCAACATTTCCTGTCAGCTATATTGAAATGCAAGAGCCAGGGAGT
TATTTGCATTTCTGTTTTTACATGTGCCACAATTATTTCTGTGGAAGGAA
ATATCACTGTTTTTTTGTACATGTAAGTAGCATGAAACTCACGCATATTT
GTATATCTTATCAATCATTGTCTACCACCGCACAATGTGTAATGATAACT
TCAATGACTGTTTCTTTGTACCCATAGCTACTGGTGAATCTACTACAGAC
TCCTGGATTCCAAAATGTGGAAGTTGCTAATTTTATGAAGACGTAAGTAT
ATTAACTTTCTTATGAGTATTGTAAGAACTTTATCCCCAACATCCCACAT
CAGATTCTTTTATATTGTTAAGAAAGGTTCATAATTGTAACAACAGTAAT
GACAGTATCTAGTGAGGATTGTTCCTCACTCTGAGTATGACTTTTTTCAG
CTGCTGATTTTGTTACTCTGATAATGTCTTGATTTTCAGAGAATCCAACC
AGACACAAGTTGTGGTGAGGATAATATCCACTGCCGACACACTGAAAGAA
ACACAGCAAACCTTTGTTAGACTGGTGGAGAAAAACCAACTCAAGGGCGT
CACTGTCAGCACAACTTCAGCTACGACCAGGAGAGATGGTGAAATACATT
TCCTTTCTATTAGCCTTATGACCTTTTTTCTATATCAAACACACACAGCA
TGTTCCTTATTAAAGCTGCAAAGTAGATTAAACAAGATTTAATGTAAAAG
GATTTGTTTGACTGACCAATAAACCGTTTCATTACATTGTCTTTCACATG
CATCTCATGCCATCTCAATGTAGCAATATATTTGATTATTAGTTTAGAAA
AATGTTTTTGCACCTGTAACATTTTGTACTTGTGAGAGATAACACAAGAC
AGCGGTGTCTAGTACTGACTTCTAAAAAGATGTTTTGTAATTGCAGAAGT
TTGCTTTTTAAGTTTTTAGCAGTTGTATATATTAATTATTAACTGTTTAA
AATTCCATACAGTTGCGTCATCAACGTCAGCTTTCCTGACCCTGTCAGAA
CAGATGTGGACCACAGATCTCCTGAACACCTCATCATCTGTGTTTGTCAC
CCTTAAAGAGAGGGTAGAGGATGGAGTAAGTAACATCTTTTATAGAACGT
TTTTCCAAGAAGTTCCTTTGGCACATAATTTGTAGTTGACGCTTTGGACT
CATGGAAACTACATGTATTGACATGTACTTAATGGGTGAGGAAATGTGTA
CAAGTAACGAATTGCATGTGAGCAGTTTTAAAGATTTGTAGTGATGTCAG
ATGTATCCTCAATGTAACGTGATACATGTCCTTTACTTGTAGCTGACAGA
ACAGATAGCCAACACTCTGGGTGTGCAGCGCATTGCTGTAACGGGTTTCC
ATGAAGAGTGAGTTGATTTGGAATTCCTTTTTACTTTCATTAGTGTATAG
ACATGATGAATTGCTGCAATAGTTAGTTATAGCACATGGCACATACTTAG
TTTTTGATCAAGAGGTCCTTAGTATTAGTCAGTTTCCAATTTGCACACAA
AATATGGTTTTAAGAAATAGGACCTTTGTTCAAGTTACAACAGCCTACTA
GAAATCTAGGATAGCTCGCAAAGTCGCAAAGCCAGTTTCAAGCTCTAAAC
TATCACCACGTTTTGTCATATTTCAATAAGCAGTATGCTCCTATTGAAAT
GTGATATCTTATCATTTGACCATACATTGTTATTCAAAAAGCATTGGTTT
TTGACCTCTACAGAAAAGGAAAAACTGTTGTTGATGTGAAGATCATCAAA
GCTGACTATGCCACTGAGGAGGTCAGGCAGGCCTTCACCGCAGTCGTTCA
AAGTGGCAGCATTCTTGGTGTTGCTGTCAACAAGACAACAGCCATGATAG
AAAATGATGGTAATTTTAGTCTTTATGTATTTTGTTTCTGAATTGACACT
CATATACATATGTAGTGTGCATCTCATTTCAAGAGAAAACATCAGTCTTC
TAAAATTGTGTTTGTCAGATTTACGTATCACTGTTTGCATTGAGTTAAGC
TGATTCTGCAAGAGTGTTGAATTTTGCACCTTTGATTTGTACACATCGGC
TGAAGCTTGTGTAACCCTTACAAAACAGGAAATGAACCACATTATTTTCC
TCTTGTAGTCATCACTAGTTCTACAGCCTCATTGGTTCTTAAGACTGAGA
AGTGGACAGCCAACTTGACCGATGAGAAGTCTCTACAGTTCGTTGCCCTA
GCAAGCAAGGTTGAAGATCAGGTAAACTTGTTGTTCGTCTTTTGTCTTAG
AGTCATGATTCGTCCTCATTCTAAGGTAGGCTCCTTTATCTTAACCTAGT
AGCCTCGAGGCTGTAAAGGTAACAAACAGCCAGACAAATAGACACTCAGT
GAAGCAAGTTTCCTTGATGTTTTTGTTGTTGTGGTGAGACTTGGAGATCT
ATTGAGAGGAGTTGTCATCAACCAGCTGAATAATGTGTTTTGGTTTTGGC
ATGTTCTTCAACATACTCGCAATGCTATTAACAGTTGCAAACACAGGATG
GATGGATGAACGTCACCTTGGGTATGTTTGTTAAATGGAAACAAGGATGT
CTACACGTTTATCAGTTCTTTTTTCTCTCTTTTCTTACAGATCAGAACTG
TGTTGGTACCCACTGTTGGATTCCTAGAGGCAAACATTGTACAATTCAGA
CAAAGGTGAGTAAATAGATCATTAAATCATGTGGTATATTCTTGTTTTCC
TGTCAATGAGACTCTGAAAACCTTTTGCAGCACAATTATTGTAACTAGAA
AAATTTCATTTTTGTATGGTGTAAATTTTAGCTTCAGTGTCTGTGATGAT
TTGTGTCCAATTTGAATAATGAGAAAGTCATCTTTAGACTAAGCGTTGAT
TAACTTAAAGATGTTTTCCTTCATATACAGCGATACAAATGTTGAGGCAA
TTGTAGCCATCCTGAAGTCTGACTACGCTACGAACGAAGTGAGAACCGCT
TTTACTACAGCAGTGTCTGATGGAACGGTGGGGACACTCCAGGTCAACAG
CAGTACAGTGGGGTACAAAACAGACGGTAAGCTTAGGTAATACATCCAGG
TAATAAGATACGCCAAATGACCGAAACTCTGACTAGCAACTGGATAAAGT
TTGGAAATGGTCAGACGTTTTAGACTGCATCTGCTGTCTTTCGGCAGTGA
CTATAAAGGGAAGAACTGGTCCAGGATTGACCAGGTTCTAACCCAAACTT
TTAATTGATATGTAAACGAAGCCAAGACATCATGAGATGGTAAGCTTATT
ACAAATACTTGATATATTATTTCCGGACTCAAATTAAAGCACTTAGCAAC
AAGCTTTCGATCCTTTCCAGTTCAAATGACCCAAAGCCTATGTCACATGA
CCTGAAAGGAAGCGTGACGGCAGCAACAGGTCTCTAGCAGTCGGTTATTG
CCCCTCTTCACGGTTGAGGGGTGGTTCGTGGACTCCGATGTACATGTATA
TGACAAATTGAGTCTTATTAATCTTAACTTTTATCAGAGATGTAGACTTG
ATTATGTCTCATAGAGAGAAGCAATTACATGAAGTCACATTAGCATAAAT
AGGAATTGAGGCATCAGCATTTGGTTTTTATTCAAATGATGTATGTCCAG
TGTTATGCGATAGAAAAGTAACTGATTTCTCCAGCTCTACCTGTGTTGAA
ATAGGAAAATAGATGATAAAAATACGGTCTGTTCCTTTACAGTTGGTATC
ACATCTACTGTCTCACTGGTTGTGAAACAGGAATGGAACGAAGATCTGGC
AAACGTCTCTAGCGTTGCGTACAAAAACCTGGAAAAGAGGGTGGAGAAAG
GGGTACGTAAAGCAGCATCTGATTCAACATCCTTTTTTTTACAGGATTAT
ATTTGATATTCTTTTCTTAACATTCACCTTTCATTTGTTAACAAGATAGA
AATATGCTTGAGACTATATGTATAGTAATCGTATTTGAAAACATGTATAT
GGCACACAATTTACTTTCTTTTCTCCACAGTTTTTCCAGGCTCTCATCAC
CACTGTTGGGTTCCAGAGAGTCGAGGTTTCTCGATTTGCAAGGTAGATGG
CTGTTCATTATTGACAATCATGATTTACCTTGAGATGTACTGTTGTATCT
TTTGTGATCCAAATTCCTAGGCTTTTACATGTACATTGCCATAATTGGGG
ATTTTGATTGACAGGGAAATGAATCAGACACGAGCCAAAATCCGTGTTCT
GTCCGCTGACTACGCCACAGCAAAGGTTCAGGCCACTGTTCTGGAGGTCG
CCAGTACAGGACAGGTCGGGACACTTCCTGTCGATCCAGCATCAGTGGAG
ATCAAACGGGATGGTAAGCTTGACACATCCACAAGTTTGGTGGCTCTCGC
GTAAGCCGTTCATTAGTTATGCAACATGAAATTTGGCGTGGGCCTCAAAA
ATTCCCTCCCGGTCAAAATAGGAATAGTTCAAGACGTGGTCCTTCTGATC
TGTTTGCATATATCATGAGAATGAACGGGTATTTTTCATATCTTAAGATG
CCAAAACAGTCCTCTTACATTGATGAATCAACGTAGGGATCACAATCAGC
GAAAAAAGTGAAAAGGGAAATTTTACTGAACAAAATGTTTTGGGGTCATT
TTTGACCCCGCTCAGTCATTTTAGTCGCAAAAATAGGTTCGGGTGTTTGA
TGGTTAAATGATACATCTTGTGCTTGTTTCTTTGGTGTAAAAACAATAAA
TATGATTTTGCCTCTCTCTAGGTCAGTCAAAGAGGTAAAATGGAAATGAA
AATGTCAATCCTAATTTTTCAGCCATAGGTTTTAGACTGAACATGTGAAT
CTATCTTTTTACAGTAAGCACAACGACAACGTCCAGATTTGTTGTCAGTT
AGAATTTCAACCCTTAGCTTACCAACAAGACAACGGAGTATCAAAATTTT
TCAGCCATAGGTTTTACAATGAAAACGACAACGTTTTATTTTTTTCAGTG
AGCACAACGACAACCGCCAGCTTTGTACTCAGTCAGAACTTCAACCCTAA
ACTTACCAACAAGACAGCGGAGTATCAGGTTCTGAAGAAGAAAGTGGAGC
TTGAGGTAAGAGTTGAAACAATGGTGCTTTCCGAGGGATTGTTTGGTTAC
TTTTAACAGTACTTTTCATTTAGACCTGAAAAACTTTACGTTTAGTTCTG
TTTGCGTGAATATACTTTTCTGCAGTTTGTGATCACATTGTCCTTTTCCA
TGTTGTCAAGCTGGCATTTCCAATCATGTTTTTTCAGCTGTTGGAGGTCT
TGGTTGACCAGGATATTGGGTTCAAGCAGGTGGATGTGTCAGAGATCAAA
Coding sequence (CDS) from alignment at Sc0000025:1349935..1357334+ >transcript:BL97013_cuf7 ID=transcript:BL97013_cuf7|Name=transcript:BL97013_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=1893bp|location=Sequence derived from alignment at Sc0000025:1349935..1357334+ (Branchiostoma lanceolatum)
GCGGCGGACATCAGGAGACGGTTTGAAGTCATTGCACAAGAGGGAGAGGT
TGGACCAAGGGCTTTCACCGTTAAAAACGCTACCACTACCAACTTTAAGA
GAGATGCAAGCATCTCGTCCACAACTAGCGCAGTCCTCACACAGTCATGG
TCTGTTCAACTTACCAACAAAACTTCACAGGAATACAGGAGACTGACCCA
GCAAATAGAGGACGAGATATCCATCATACTTGTTCAGAATGCTGGATTTA
AGAGAGTCAATGTCAAGGAGTACAAACAAAGTTCTGATGGCAAGGTGGAA
GTGACCACCAGGGTAACCATCGCTCCTTATGCCTTGTTGGAAACGCAGTC
ATCCTTTTTGGAGGCTACAAAAACAGGACAGTTGGGGACAATCCAAGTTT
TGAACACATCAGCCACTATTGTTGAAGATGTGAGCCAGTCTGCAACTTCC
TCCATGGTTGTGACTGAGGAATGGAACCCACAACTTCAGAACACAGACTC
AGTGGTCTACAAGGAACTCAAGACTAAAATAGAGCAAACGCTACTGGTGA
ATCTACTACAGACTCCTGGATTCCAAAATGTGGAAGTTGCTAATTTTATG
AAGACAGAATCCAACCAGACACAAGTTGTGGTGAGGATAATATCCACTGC
CGACACACTGAAAGAAACACAGCAAACCTTTGTTAGACTGGTGGAGAAAA
ACCAACTCAAGGGCGTCACTGTCAGCACAACTTCAGCTACGACCAGGAGA
GATGTTGCGTCATCAACGTCAGCTTTCCTGACCCTGTCAGAACAGATGTG
GACCACAGATCTCCTGAACACCTCATCATCTGTGTTTGTCACCCTTAAAG
AGAGGGTAGAGGATGGACTGACAGAACAGATAGCCAACACTCTGGGTGTG
CAGCGCATTGCTGTAACGGGTTTCCATGAAGAAAAAGGAAAAACTGTTGT
TGATGTGAAGATCATCAAAGCTGACTATGCCACTGAGGAGGTCAGGCAGG
CCTTCACCGCAGTCGTTCAAAGTGGCAGCATTCTTGGTGTTGCTGTCAAC
AAGACAACAGCCATGATAGAAAATGATGTCATCACTAGTTCTACAGCCTC
ATTGGTTCTTAAGACTGAGAAGTGGACAGCCAACTTGACCGATGAGAAGT
CTCTACAGTTCGTTGCCCTAGCAAGCAAGGTTGAAGATCAGATCAGAACT
GTGTTGGTACCCACTGTTGGATTCCTAGAGGCAAACATTGTACAATTCAG
ACAAAGCGATACAAATGTTGAGGCAATTGTAGCCATCCTGAAGTCTGACT
ACGCTACGAACGAAGTGAGAACCGCTTTTACTACAGCAGTGTCTGATGGA
ACGGTGGGGACACTCCAGGTCAACAGCAGTACAGTGGGGTACAAAACAGA
CGTTGGTATCACATCTACTGTCTCACTGGTTGTGAAACAGGAATGGAACG
AAGATCTGGCAAACGTCTCTAGCGTTGCGTACAAAAACCTGGAAAAGAGG
GTGGAGAAAGGGTTTTTCCAGGCTCTCATCACCACTGTTGGGTTCCAGAG
AGTCGAGGTTTCTCGATTTGCAAGGGAAATGAATCAGACACGAGCCAAAA
TCCGTGTTCTGTCCGCTGACTACGCCACAGCAAAGGTTCAGGCCACTGTT
CTGGAGGTCGCCAGTACAGGACAGGTCGGGACACTTCCTGTCGATCCAGC
ATCAGTGGAGATCAAACGGGATGTGAGCACAACGACAACCGCCAGCTTTG
TACTCAGTCAGAACTTCAACCCTAAACTTACCAACAAGACAGCGGAGTAT
CAGGTTCTGAAGAAGAAAGTGGAGCTTGAGCTGTTGGAGGTCTTGGTTGA
CCAGGATATTGGGTTCAAGCAGGTGGATGTGTCAGAGATCAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000025 | genome | Sc0000025:1349935..1357334 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97013_cuf7 |
| Biotype | protein_coding |
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