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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97016_cuf10 >transcript:BL97016_cuf10-protein ID=transcript:BL97016_cuf10-protein|Name=transcript:BL97016_cuf10|organism=Branchiostoma lanceolatum|type=polypeptide|length=239bp
VGTLSLNSTSATITTDVSVSSTMTMSVAQNWTMDLVNRTTEAYTVLVRKI
EQEMTQKLLVNVGFQGLEVTQFKQTASNQILVVVRIVTAVYAQTSTQQTF
ITTVQSGRVGTLSVVRTSAAIKTDVTTSQTAQMTLMQTWSADLQNSTSQT
YVTLQKQVVNAMNIELGNTVGFQRVVVTKFTKSSNNTVITEVRMITAAYA
VNAVENVFVQAVSTGQVQGITVDKASANIVRDVSVSSQV Run BLAST on NCBI mRNA from alignment at Sc0000025:1363298..1366477+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97016_cuf10 ID=transcript:BL97016_cuf10|Name=transcript:BL97016_cuf10|organism=Branchiostoma lanceolatum|type=mRNA|length=3180bp|location=Sequence derived from alignment at Sc0000025:1363298..1366477+ (Branchiostoma lanceolatum)
AGTTGGGACCCTAAGTCTGAACTCAACATCAGCTACGATAACCACAGATG
GTACATATTCAGAACATTTACCACTGCCTTAGTTTTTCTACCTATATCTA
TATCCTGCATAAGCAAGAGACAAAAAATCTCTCTGTATATCCATTTGTCT
CAAGGACGATTGTATCATCATCATGTTGGGGTGCTTTTGTCTTTGTCTTT
CATGATGATCACTTCACAATGAAGTAAATTCTCTATATAAGATTTGTTTG
AGCAATTTCTAACTATTGTACAACTATGGTTGTTTTAACCAACCTTTGGC
TACAGCAAAATAGAGAGTTTTACGGATTTTTGTCCTTGTCGGTGTAGTGA
GCGTGTCGTCTACGATGACTATGTCTGTGGCACAGAACTGGACAATGGAC
CTGGTGAACAGAACAACAGAGGCCTACACAGTTCTTGTTCGGAAGATAGA
ACAAGAGGTATACCACTCATTTCTTACATTCATCTATCCATTCATCGCAC
ATTCATCCATCCATAGATCCATCCACCGATCCGTGTGTTGCATCTCTTGA
CGTGACAGGTCGTTCGGTGTAATATAACCAGCTGCTACGACGCCGCGTGC
CCGTGAAGCTGTGTGTTATGCCGAAGGGCGGTTATACCGGCTATATACTT
AGATACAGATCTCCTTTGAAAGAACGAGTGAATGGTTTAGACGAAAATTG
CTGGAAGGGGTATAATCTATTTCTGTTCAGGCACGTGTGTGGAGTAACTC
ATTTTGGCTAAAAGGAATGGTTTGAACCATTGTTTACAATCCTTTTACAT
TTTCAGATGACACAAAAACTTCTGGTGAACGTTGGATTCCAGGGGCTTGA
AGTGACTCAGTTTAAACAAACGTAAGTAAGACAGACAGCTATATTTATTT
CTTCATTTGGATTAAATTTCTGTGTAATACGTCTCATCTAGCATCATTTC
ATTTCTGCCTTCAACGCCACAGGTGGTAACAATGTTAGTATTAGGTATAT
GACACTAGTTTGCTATTTCAAGTCGGTGTGTTGCATTGAAGTGCAGTTAT
TTCGGCTATACAATGCAGAATACAGATGTTAGATTATGTAAGCGACGTTT
CATTTATACACTACAGGGCGTCCAATCAGATCCTTGTGGTTGTGAGGATT
GTAACAGCCGTGTACGCCCAGACATCGACACAGCAGACCTTCATCACCAC
AGTGCAGTCTGGCCGTGTAGGAACCCTGTCTGTTGTCCGCACATCAGCGG
CCATCAAAACGGACGGTTTGTACACTTCAACTGTCTTTCTGTTAACACCA
ATGCATATATCTCCCAAAACGTAGGGAATTTCATACTCCACTGCACACAA
AAAAGAAATCAAACCCATTTTGATTAGAAGAAGCTCTAGTTGACATAATT
TTACTTGTGTTTATTTCATTACTGTGTACTTATAATTGTCATTATCTCAT
TTCATTATATTCTTGCAATTAACCTCCGCGCATGAATTTGGAATAAAGTT
ATTATAAGTATCAATTATTATTATCAAAATGTAGCTTTTTGTTGACTTCA
TTTTACAAAAAAGGCTCATTGTGAACCACTCAAATGTTTAGGGATACAGT
TACATTGTTGTGATGACCGATGTATGTTGACCTTTACTGTTGGCAAATGT
GTGTTCACATTAGTCGTGAAAAAATTAGGTTATACCAATCAGGGAAGCAA
TCACGATGAAGCTTGTTCCATGAAGACTGAAGGCTTTAGAAACTGTCGAT
GAAGGTCCTTCATTGCCATCTCTGAGAGACTTTTAAAGATGCTGGTTTTT
CTATGTTTAATACAGTTTTCCAAATGCTTTCTTTAATCATGACTTGTCAT
CTTGTCAATACAAGAAAAGTATCCTCAAAGTTTATTTTCAAAACCAAACA
ATGCCGGTATTTTCTGCAGTGACGACCTCCCAGACTGCCCAGATGACCTT
GATGCAAACATGGTCTGCTGACCTTCAAAACAGCACTAGTCAGACTTATG
TGACCTTGCAGAAGCAAGTTGTCAATGCGGTATGTATTTCTAGCTGTCAA
TCATGGCCATAACAGCTGCTATATTTCAGTACCAGGGACATGGCGCTTAT
CTTAAGTGCACTGATACAGAACATTTAGAAAACGTATGAGGAAATGATGG
CTAAATTTTACGGTAGCCGTGCTTTCAGCACCAAGGCCATGTCCATAGGC
TAAACTTTTTCGTGTTGTTGTTCGCACTGTTCTTTGGCTTAAGAGTTGGT
GGGATCACAGTCTTACCTGCCGACATAGTCTCTGATGACTATGCCTGTTC
TACGAGAGGCACATTCGGTTCAACCTTGGGCAACTGAATCCAACTGTGTA
TTTTGACGGAGTAGTTAACTCTTGGGCTTTAGACTGCCCCTATCTTTGTG
CATCTCCGCCTGTACTCTGCAGCATTTCGTCGTTTATAACATGGTAAAAA
GTTGTATTCTACATCCACAGATGAACATAGAGCTGGGAAACACTGTTGGC
TTCCAACGAGTCGTTGTAACAAAGTTTACAAAAAGGTAGGCCATTTCCCT
CAGTTCTTGACAATGATTTTTTTTTCTAGCAAGGTAGCCAAGCATAATGA
AAATGAAGACTACAACGTTTTCAAAAATGTTGAATACATCTGCATTGTTT
TGTCCATGGTCTTCCAGTCAAAATATTTCAAATAAAAAATCTATGTCATC
CCATGTTTTTGTTACAGTTCCAACAACACCGTTATTACCGAAGTACGTAT
GATAACGGCGGCCTATGCAGTCAACGCTGTAGAAAACGTTTTTGTACAAG
CAGTTTCAACCGGACAGGTGCAAGGAATCACCGTAGATAAGGCATCTGCA
AACATTGTCCGGGATGGTAAGATATGCGTGGAGTTTCAAGATCACGTTAT
TTTCATAATCTCACTACAGTAGCTTCGTTTTATTTTGTGTTAATTTAAAA
TCAGCCGTTATAGCATGTCTTTTAGCATGATTTATATCAACATAGTAGAA
GTCAAGCCTGTGATCTTGTGGGACCAAGGAAATTAAGGCGAAGAATGTCG
AAAGCATTGAATTCCGTTGTCTGCCTTTGATTGCAACATACGTATTACCC
ACTGTATCACTGCAATTCAAACATGTAATTTGTGTATTTGTTTACTTGCT
CTTTTCAGTAAGCGTATCTTCCCAAGTTAC Coding sequence (CDS) from alignment at Sc0000025:1363298..1366477+ >transcript:BL97016_cuf10 ID=transcript:BL97016_cuf10|Name=transcript:BL97016_cuf10|organism=Branchiostoma lanceolatum|type=CDS|length=717bp|location=Sequence derived from alignment at Sc0000025:1363298..1366477+ (Branchiostoma lanceolatum)
GTTGGGACCCTAAGTCTGAACTCAACATCAGCTACGATAACCACAGATGT
GAGCGTGTCGTCTACGATGACTATGTCTGTGGCACAGAACTGGACAATGG
ACCTGGTGAACAGAACAACAGAGGCCTACACAGTTCTTGTTCGGAAGATA
GAACAAGAGATGACACAAAAACTTCTGGTGAACGTTGGATTCCAGGGGCT
TGAAGTGACTCAGTTTAAACAAACGGCGTCCAATCAGATCCTTGTGGTTG
TGAGGATTGTAACAGCCGTGTACGCCCAGACATCGACACAGCAGACCTTC
ATCACCACAGTGCAGTCTGGCCGTGTAGGAACCCTGTCTGTTGTCCGCAC
ATCAGCGGCCATCAAAACGGACGTGACGACCTCCCAGACTGCCCAGATGA
CCTTGATGCAAACATGGTCTGCTGACCTTCAAAACAGCACTAGTCAGACT
TATGTGACCTTGCAGAAGCAAGTTGTCAATGCGATGAACATAGAGCTGGG
AAACACTGTTGGCTTCCAACGAGTCGTTGTAACAAAGTTTACAAAAAGTT
CCAACAACACCGTTATTACCGAAGTACGTATGATAACGGCGGCCTATGCA
GTCAACGCTGTAGAAAACGTTTTTGTACAAGCAGTTTCAACCGGACAGGT
GCAAGGAATCACCGTAGATAAGGCATCTGCAAACATTGTCCGGGATGTAA
GCGTATCTTCCCAAGTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000025 | genome | Sc0000025:1363298..1366477 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97016_cuf10 |
| Biotype | protein_coding |
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