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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97044_cuf8 >transcript:BL97044_cuf8-protein ID=transcript:BL97044_cuf8-protein|Name=transcript:BL97044_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=413bp
MSKRVTVTAIFEEEEESVVVTGPPDVESGNCLVCGEKASGFHYGVFSCEG
CKGFFRRSVHKGSVKVCKFGNKCCLDPSTRRSCAECRLRLCKAAGMRPDC
LLSDAQRRSKSLWRQHYPAGKSSNAGPSSAPSPLINENVDISSSAPGTSA
PPWSDDVCYSSTAQWILGDPEVARMFAKPELVQFLAPNHQQIISEILGYW
KKSASEERSHIEELCKDTLAGKTMEEKQLNTLKHGDVCIQRCIAFCKAIR
GFKDLSIDDQIAVVKGSMFEYSMMRWTVSCQECDIDHEVTYRVANLVYTQ
DFMDTYMKWVEGMAKLNVDPITVHLLCCAVVLSPDRPHIADTATLEKAQE
QYTDCLQAYCKVAYPNEPMMFPNLLGKLTEVRSAGQAFENGLRPDYETML
KVQPLVSEVWPKK Run BLAST on NCBI mRNA from alignment at Sc0000242:323820..330346- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97044_cuf8 ID=transcript:BL97044_cuf8|Name=transcript:BL97044_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=6527bp|location=Sequence derived from alignment at Sc0000242:323820..330346- (Branchiostoma lanceolatum)
ATGAGCAAGAGGGTAACAGTGACGGCAATCTTTGAGGAGGAGGAGGAGTC
CGTGGTCGTTACTGGCCCTCCAGATGTCGAGAGCGGAAACTGTCTGGTGT
GTGGAGAAAAGGCGTCGGGCTTCCATTACGGAGTCTTCAGCTGTGAGGGC
TGCAAGGGTGAGCAAGCTTTCATGGATACCGTCTGCATGCATGTAAAGTC
ATGAGCTAAGTCTATCATTCCATTTTCCATGTCACTTAGGGCAAACGTAG
GTAGGCAATTGTGTTTGTATTATAGCGTTAACATGTTCTAGATTACTAAA
GTGGGTGTTGCTTATTAGTTTCGCCAAGAATGTTATGTTGCATATAGCAT
GGTTGTGTTCGCGGTTTAACAGCATTAATCAAGAAGCTATGGATGGATTG
TTGTTCGTGCTTATAACCTTTTTATAACCATACCATACAACCGTACGTTT
GTAAGTTGTATGTTAAAGCATCTTATATTATAAGTTATAATGGTGTTGCG
TGTAGTTTTTATCCTTGTACCAGCTGGCATTATGCTGTGTCGATTTTTGT
AGGTTTCTTTCGGAGAAGTGTACACAAAGGCAGCGTCAAGGTATGTAAGT
TTGGGAACAAGTGCTGCCTGGACCCCAGCACCAGGAGGAGCTGTGCTGAG
TGTCGGCTCAGACTGTGCAAGGCTGCTGGCATGAGGCCTGATTGTGAGTC
TATAAGTTGACATACTACTATATCATGCCGGTACACCGGCAGCTACACTC
ATTGCAGGATAAAACACGGAGTCTTTATAGTCTCCACTTGTCTCCAACAG
TAATGATTCATTATGTATGTCTTGGAAACAAGCAACTTGAGTATGAAATA
AAACAAGAGAAACTTATATCTTGTGTTCTCTTATTCAGAAGCAGTTTAAG
AGTATTTGGTCATATTTCAGGTCTTCTGTCGGACGCTCAGCGCAGGTCCA
AGTCATTGTGGCGGCAACATTACCCAGCAGGCAAGTCTTCCAACGCCGGA
CCTTCGTCTGCACCCTCACCACTCATCAACGAAAATGTCGACATCTCATC
CTCCGCACCCGGGACATCAGCACCGCCATGGTCTGATGACGTATGCTACA
GCAGTACCGCCCAGTGGATACTGGGGGACCCTGAGGTGGCCAGGATGTTC
GCCAAGCCTGAACTGGTGCAGTTTCTGGCTCCAAACCACCAGCAGATCAT
CTCTGAAATCCTGGGATATTGGAAAAAGAGCGCCAGCGAAGAACGCAGCC
ACATCGAGGAACTATGCAAGGTAAGTGTTCAGTTGGACTTAGAGTTTTAC
TCTGCTGTAAGTTAAATTGGTCTATGTAAGTCTATGTGGCCTTTTACATC
TTTCTTCCACGTTTTGTATATATCAGCCTGTGTAACCCAAAGTTAAATTG
GCTATACATCAGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGGGAAGAAATGGAAATC
TGGAAGAATCGTTGATTCTGTCGATCCTAAGTCTGGTTAACGGTTTGCCC
GTAGTGATCCCGATCGGAGGCTAATTTGTTTCTAAATATATCAGTAACGC
AGACACTCCGAACTTTTCAAATTTGGTTCATGACTTTAGATCATTTGATT
GATTTGAAATCTAGGACTGCCTCATTGTTTTCTTTGGTGCAGGATACTCT
GGCGGGCAAGACCATGGAGGAAAAACAGCTCAACACCCTAAAGCACGGAG
ATGTTTGTATCCAGAGATGCATCGCCTTCTGCAAGGCAATCAGGGGATTC
AAGGACCTCTCCATCGATGATCAGATCGCGGTTGTCAAGGTAAGTTATTT
TTCTAATTCGTTAGCTGTAGAACATATTATTTTATTATAGTATATTTACT
ATTGACATAAATATCGAAAGTTTCGATCTCCCAGACTCGTTAAACTTTGT
TTCACTGGGGGGTACCAACATTAAGTAGGTGCTGCTTTATATCACCGGGT
AGAAATACGTCAGATTATTGTCTTTTTTTTATAAATTTTTTTAGATTTAT
TGGTTTGGCTGTCCAACTAGCCTGTGGCTATTACAAGGGGCTAGCCCTGC
TAGCTGACAAAAACAATACATTGCAATGGACAGCATAACGAGCTATAACA
ATATTCTAAATACATGTACATATTAAAAACTATAAATGATTCTGTTTGAA
GGGATCCATGTTCGAGTACTCCATGATGCGCTGGACTGTCTCCTGCCAGG
AGTGTGATATAGACCACGAAGTGACCTACCGCGTGGCAAACTTAGGTAAG
TGATGACTATCATATTTAACCCTACTGTATCATATACATGCATTGATAAA
ACCAAGGAGGTTTAAAGGAGACCTCCTTGATAAAACAGTGCGTTCATTGC
TAAATCATTGTAAGGGTTTACATGACAATGATTCAGCCTGTACTTAAACC
ATGGATGTTGCCAATACATCAGAAGAGTATATAAGATAGCAAAGCGAGTA
TACATTGATGAAGAGAGCTGTGTTAGCGGTGGAAGTACGATGAGTGTTTC
TGATTATATAATGACTGTAGTAATATGTAGACTCACACTCACTCGCACAA
ACTGTTCTATCGTTTCAATAGAGTGTTTCTCCGATATACATTCTGGCGCG
TAGACTTAAAACGGGGTAGAGTAACAACCATTCAATGTCGCTGAATCACT
CCTACCCAACCCCCAACCCTCCTCTCGCCAGCTGAGCCCCAACCCCCTCC
CCCGCCGGCTGAGCCCCAACCCCCTTCCCCCTCCAGCTGACCCCCTCTGA
TGCACCTTTATACATGTGATTGTAGTGTACACCCAGGACTTCATGGACAC
CTACATGAAGTGGGTTGAAGGTATGGCAAAGCTGAACGTGGACCCGATCA
CAGTGCACCTTCTTTGTTGCGCGGTCGTCCTATCACCTGGTAGGTGTTTC
CCCAAAAGGCACTTCTTATACTCATCTGCATGCAATATAACTTGATTCCC
GTTATACCAGATCTGTCCAAGCAATGGTAGCAAAATCTCTTAGATGCAAT
GCATGTCCTGATACTTTGACTCAAACGGTAGTCTGTGAACATTTCGATGC
ATGCTAGCCTGTGGAGTCAAGCGTCACTCACAAAGAAGCCCCTATATTCT
AAACTTTGTTATAAGTTCATTTGTCGATCTTTCTTGTGTGTGGCAACCTG
TGTGGTAGTGCATGCTGAAGATTGGAGGCCAAGACCAGGATCAAATATGG
CCTTGCCTTGTTCGCCATTCCAGATCGTCCGCATATTGCCGACACTGCAA
CGCTGGAAAAGGCCCAGGAACAGTACACAGACTGTCTCCAAGCTTACTGC
AAGGTCGCCTACCCGAACGAGCCGATGATGTTTCCTAACCTCCTCGGAAA
GCTGACGGAGGTCCGCAGTGCTGGGCAGGCCTTTGAGAATGGCCTGCGAC
CAGACTACGAAACCATGCTTAAAGTGCAGCCACTTGTGTCGGAGGTTTGG
CCCAAAAAGTAGTGTGAATCAGTCGGCCGTGTGTACAAAATGGAATCCAT
CAATTTTGTAGAATGATAACCCTGATCTGAACTTCGGAAACCCGGCCACG
TCACTATGATGCCTGATGAAAGAGAGTACAACAATAGTATGCTATTTGAA
GTGCGCATGACAGGGGCCATGGATATATATGCCCTTGTATCACAAATCCC
CACAAGTTTGAATACATCACAACGCAATCGAAAAATGCAGAACGTCTGTG
AGTTATACACTTACCAAGGCTTAATAGACAAAAAGAAATTATATAGATAC
AAAATAGCATTTCTATCAATAGATAACGTATAAGTAACAATGCACACTTG
AGATGAAACATGTTTATGTGGTATTGTTATTTGTTGATTCTGATTCTATC
TATTCTATGTTGATTCTGGTTTATAGACAAACGGAGTTGCCAATGTATTA
TTGAAACAGAATTTGTAACATTCACCTCTAAGCTGTAATGGTATTGTCTC
ATTTATTGTTGAAATGAAGGCATGCAAATGGGGTCATGAGAAATGACTAG
GAGGGCTTTAGTGACCAACCTTAAGAGGTTTGCCACCTTGTACCTTTAAG
GGACAGCGTCTCATGATTGACATGACAATAATCATAAGTCTGTTCCCACG
TAGCCTGGTCCCAGTCTCTAGGGGTCAGCTTAGGGGTTTTAACCGGGCCC
AGTTTGCTTTATTGAACCGTTTCTGATAGCCTTCCTACCGCTACCACTAC
TTCCGCTTGCCACCCGACGTAATCTAATCCAAGGCCGTAAACACACCCCG
AGTAAGCTGTCTGAGCGGGCGGGGGCTACTCCCAGTGCCGTAGAGATATC
GAGGAGCCCCCGATGGTATGGATTCCAGGCTCACGTTACCAGGCGCACAT
TAGTGTTCGGCGTTCCTGTAGCCGCATCTTCGGAAGCTCTGTTAATCAAT
GGTAGAGTAAAAGTGCCAAATGACCATTCCGAAGAGGAATAAAAAGTTCG
TAATGTATAAGACACAACATCTCTAGCTCTCTGCAGCATAACGGGTTGTT
ACAGCGATGGNNNNNNNNNNNNNNNNNNNNGAACATTTCGATGCATGCTA
GCCTGTGGAGTCAAGCGTCACTTACAAAGAAGCCCCTATATTCTAAACTT
TGTTATAAGTTCATTTGTCGATCTTTCTTGTGTGTGGCAACCTGTGTGGT
AGTGCATGCTGAAGATTGGAGGCCAAGACCAGGATCAAATATGGCCTTGC
CTTGTTCGCCACTCCAGATCGTCCGCATATTGCCGACACTGCAACGCTGG
AAAAGGCCCAGGAACAGTACACAGACTGTCTCCAAGCTTACTGCAAGGTC
GCCTACCCGAACGAGCCGATGATGTTTCCTAACCTCCTCGGAAAGCTGAC
GGAGGTCCGCAGTGCTGGGCAGGCCTTTGAGAATGGCCTGCGACCAGACT
ACGAAACCATGCTTAAAGTGCAGCCACTTGTGTCGGAGGTTTGGCCCAAA
AAGTAGTGTGAATCAGTCGGCCGTGTGTACAAAATGGAATCCATCAATTT
TGTAGAATGATAACCCTGATCTGAACTTCGGAAACCCGGCCACGTCACTA
TGATGCCTGATGAAAGAGAGTACAACAATAGTATGCTATTTGAAGTGCGC
ATGACAGGGGCCATGGATATATATGCCCTTGTATCACAAATCCCCACAAG
TTTGAATACATCACAACGCAATCGAAAAATGCAGAACGTCTGTGAGTTAT
ACACTTACCAAGGCTTAATAGACAAAAAGAAATTATATAGATACAAAATA
GCATTTCTATCAATAGATAACGTATAAGTAACAATGCACACTTGAGATGA
AACATGTTTATGTGGTATTGTTATTTGTTGATTCTGATTCTATCTATTCT
ATGTTGATTCTGGTTTATAGACAAACGGAGTTGCCAATGTATTATTGAAA
CAGAATTTGTAACATTCACCTCTAAGCTGTAATGGTATTGTCTCATTTAT
TGTTGAAATGAAGGCATGCAAATGGGGTCATGAGAAATGACTAGGAGGGC
TTTAGTGACCAACCTTAAGAGGTTTGCCACCTTGTACCTTTAAGGGACAG
CGTCTCATGATTGACATGACAATAATCATAAGTCTGTTCCCACGTAGCCT
GGTCCCAGTCTCTAGGGGTCAGCTTAGGGGTTTTAACCGGGCCCAGTTTG
CTTTATTGAACCGTTTCTGATAGCCTTCCTACCGCTACCACTACTTCCGC
TTGCCACCCGACGTAATCTAATCCAAGGCCGTAAACACACCCCGAGTAAG
CTGTCTGAGCGGGCGGGGGCTACTCCCAGTGCCGTAGAGATATCGAGGAG
CCCCCGATGGTATGGATTCCAGGCTNNNNNNNNNNNNNNNNNNNGAACAT
TTCGATGCATGCTAGCCTGTGGAGTCAAGCGTCACTCACAAAGAAGCCCC
TATATTCTAAACTTTGTTATAAGTTCATTTGTCGATCTTTCTTGTGTGTG
GCAACCTGTGTGGTAGTGCATGCTGAAGATTGGAGGCCAAGACCAGGATC
AAATATGGCCTTGCCTTGTTCGCCATTCCAGATCGTCCGCATATTGCCGA
CACTGCAACGCTGGAAAAGGCCCAGGAACAGTACACAGACTGTCTCCAAG
CTTACTGCAAGGTCGCCTACCCGAACGAGCCGATGATGTTTCCTAACCTC
CTCGGAAAGCTGACGGAGGTCCGCAGTGCTGGGCAGGCCTTTGAGAATGG
CCTGCGACCAGACTACGAAACCATGCTTAAAGTGCAGCCACTTGTGTCGG
AGGTTTGGCCCAAAAAGTAGTATGAATCAGTCGGCCGTGTGTACAAAATG
GAATCCATCAATTTTGTAGAATGATAACCCTGATCTGAACTTCGGAAACC
CGGCCACGTCACTATGATGCCTGATGAAAGAGAGTACAACAATAGTATGC
TATTTGAAGTGCGCATGACAGGGGCCATGGATATATATGCCCTTGTATCA
CAAATCCCCACAAGTTTGAATACATCA Coding sequence (CDS) from alignment at Sc0000242:323820..330346- >transcript:BL97044_cuf8 ID=transcript:BL97044_cuf8|Name=transcript:BL97044_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=1242bp|location=Sequence derived from alignment at Sc0000242:323820..330346- (Branchiostoma lanceolatum)
ATGAGCAAGAGGGTAACAGTGACGGCAATCTTTGAGGAGGAGGAGGAGTC
CGTGGTCGTTACTGGCCCTCCAGATGTCGAGAGCGGAAACTGTCTGGTGT
GTGGAGAAAAGGCGTCGGGCTTCCATTACGGAGTCTTCAGCTGTGAGGGC
TGCAAGGGTTTCTTTCGGAGAAGTGTACACAAAGGCAGCGTCAAGGTATG
TAAGTTTGGGAACAAGTGCTGCCTGGACCCCAGCACCAGGAGGAGCTGTG
CTGAGTGTCGGCTCAGACTGTGCAAGGCTGCTGGCATGAGGCCTGATTGT
CTTCTGTCGGACGCTCAGCGCAGGTCCAAGTCATTGTGGCGGCAACATTA
CCCAGCAGGCAAGTCTTCCAACGCCGGACCTTCGTCTGCACCCTCACCAC
TCATCAACGAAAATGTCGACATCTCATCCTCCGCACCCGGGACATCAGCA
CCGCCATGGTCTGATGACGTATGCTACAGCAGTACCGCCCAGTGGATACT
GGGGGACCCTGAGGTGGCCAGGATGTTCGCCAAGCCTGAACTGGTGCAGT
TTCTGGCTCCAAACCACCAGCAGATCATCTCTGAAATCCTGGGATATTGG
AAAAAGAGCGCCAGCGAAGAACGCAGCCACATCGAGGAACTATGCAAGGA
TACTCTGGCGGGCAAGACCATGGAGGAAAAACAGCTCAACACCCTAAAGC
ACGGAGATGTTTGTATCCAGAGATGCATCGCCTTCTGCAAGGCAATCAGG
GGATTCAAGGACCTCTCCATCGATGATCAGATCGCGGTTGTCAAGGGATC
CATGTTCGAGTACTCCATGATGCGCTGGACTGTCTCCTGCCAGGAGTGTG
ATATAGACCACGAAGTGACCTACCGCGTGGCAAACTTAGTGTACACCCAG
GACTTCATGGACACCTACATGAAGTGGGTTGAAGGTATGGCAAAGCTGAA
CGTGGACCCGATCACAGTGCACCTTCTTTGTTGCGCGGTCGTCCTATCAC
CTGATCGTCCGCATATTGCCGACACTGCAACGCTGGAAAAGGCCCAGGAA
CAGTACACAGACTGTCTCCAAGCTTACTGCAAGGTCGCCTACCCGAACGA
GCCGATGATGTTTCCTAACCTCCTCGGAAAGCTGACGGAGGTCCGCAGTG
CTGGGCAGGCCTTTGAGAATGGCCTGCGACCAGACTACGAAACCATGCTT
AAAGTGCAGCCACTTGTGTCGGAGGTTTGGCCCAAAAAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000242 | genome | Sc0000242:323820..330346 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97044_cuf8 |
| Biotype | protein_coding |
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