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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97045_cuf0 >transcript:BL97045_cuf0-protein ID=transcript:BL97045_cuf0-protein|Name=transcript:BL97045_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=463bp
GNWSVWSSWSNCSVTCGFGNQSRSRSCDNPPPQHGGTNCTGSSEDVQICD
SGQQCAVNGNWSEWSPWSPCDRSCGVGSKTRSRSCDNPEPLYGGANCSGT
SEDVQTCDSLPQCKVDGGWSLWSSWSNCSGTCGNSFRMRSRICDHPPPQH
GGSVCNGKRSESETCGQDPSCYVPSVTSDAKPDSVENATVTASTVAVTFS
DQMFSLGTGLITHFTVIVAEDDAGLNDTSETGLTQNAQMYNWYDVQGLSP
VPPYQVSNLAPYPFTISMRKRRSADSQELTFTIGDENCTDPNVTLYCNGP
LKLATTYRAKMRVFTPNGYYADSYYSDPVSTLASSWSEWTPWSNCTVSCG
AGNQTRNRTCLTAPGNSTVANCTGESLQTRACLDIGPCPVDGVWSLWSGW
STCITACGLGNQTRNRTCSQPLYGGANCTGDREETQTCTGPLEPHCTSTA
GPPVSTIPQTTPS Run BLAST on NCBI mRNA from alignment at Sc0000384:12596..16813+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97045_cuf0 ID=transcript:BL97045_cuf0|Name=transcript:BL97045_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=4218bp|location=Sequence derived from alignment at Sc0000384:12596..16813+ (Branchiostoma lanceolatum)
GGCAACTGGTCAGTATGGAGCTCCTGGTCCAACTGTAGCGTCACGTGTGG
ATTCGGTAACCAGTCGCGCAGCCGCAGTTGTGACAACCCACCTCCTCAAC
ATGGCGGCACGAACTGTACCGGGAGTTCTGAGGACGTTCAGATCTGCGAC
AGCGGCCAACAATGTGCGGGTGAGTGTGTACAATGGTGTAAGGAGAAAAG
AACGAAATAGATTTTACCTTATAAGGATTGTTTAAAAGAAATGCTCAAAA
TGCATTCATGCATGATAATGAAGGTCAAAGTTGCCTGGAAGTCTATATCT
GCCGCCACCTGATATTTATGCACGTTTAGTCCGGGTCCAACATTCAATGT
TGACATTACTTAATTTTGCAGTTAATGGAAATTGGTCCGAATGGAGTCCG
TGGTCCCCTTGTGACAGGAGTTGCGGTGTTGGGTCCAAAACTCGGAGCCG
AAGCTGTGACAACCCAGAGCCACTGTACGGTGGGGCCAACTGCTCCGGGA
CCTCAGAGGACGTACAGACGTGTGATTCCCTGCCTCAATGTAAAGGTACT
CAAAACAGCATCTTTGTAGGTCCAAGAAGACGGTATTTTAAAAGTCCTGG
TTACGAGAGATCCGTACTCATAAGATATGAAACTGCGCTGTCAACGTTTC
GGTATTCCCACCACACTGTCACCTTTCTCAAGGCATTACTGTCTGTGTGG
TTCTACTTCCCGCCACTAGGTGGTGCTGCACTGGTAAAGATGCGGTCCCA
AACGTACGTGTGACAAAACTATGTCGCTCATCATCACCGTTCATGACTGG
AGTAGATCTTGTGATTCACACAGCCCCCTAATACAGCGAGTGCCTCTGTA
GTCTATGGGCTGCGTGTATAAACTCTGATAACCATTTACTCGCAGCCAAG
TGAAACTTTTCACAGGACTATCGTTAGAAATATAAACGGGTTTGTTCCAT
TGTTACAGTTGATGGAGGCTGGTCTCTGTGGTCGTCCTGGTCCAACTGTA
GTGGGACGTGTGGTAATAGCTTCAGGATGCGCAGTCGCATCTGCGACCAT
CCGCCGCCTCAACACGGTGGATCCGTCTGTAACGGTAAACGGAGTGAGTC
GGAAACATGCGGACAAGATCCATCTTGCTACGGTAGGTTTCCTCACAACA
CAGTACTGGTTTACTCATTATCATCTGGTCGTCTAAAAATCTCACGGGTG
TCCCAAAGTACAGTTCGCGTCTAGACACAGTTTATGAATGTAGGTAGTGC
ATGCCCATGTTTTGGAGCCCACAGGTGAACATTACTGATTTATTACAGCC
TGTTTTTATCACTAGATTGTTATCCCATAAGTATCTTTCCGAACCGTTTA
ACAAAATCTAATAGTGACCGTGTAAGGATAAGATGGATCTGGATGTATGT
TTGTGCTCCGCAGTCCCAAGCGTGACATCCGATGCTAAGCCGGACAGTGT
GGAAAACGCCACTGTCACAGCCTCCACAGTAGCTGTTACCTTCAGCGATC
AGATGTTTTCTCTGGGAACGGGGCTGATCACCCATTTCACTGTCATTGTA
GCAGAGGATGATGCAGGTGAGTTTGTCTTTTCTTACCAATATAAGAACAC
GTTTGGTTTTCATAATTCATTTAGCGGAACAATTGACTTTTCTTGATATT
AGTCTGATGCAGATTTCTTTGATACTAACTATGTTTGGAAGGTAAGTAAC
TTTTGACTAACAGTGGAACATTAGTCCTATCCTTGGTGCTGAAAGGTTTT
CAAATTGTTATCAAGTTTTCTATAGGCGCTAGGCATCATGTTTGCGAATT
GCCTTGTTGACGGAGGCAATGCTGGGTAAATGTCCTTGGTACTGAACAAC
ATTTAAATGAAGTCACTTTGGGACAACCAATGGTGTGAGAGAGAAGTACC
AAGCGAGGCAAATCATGTTTTTAGTGAGAGACGAGGTCGTCATGGGAAGT
TTCTGTTTATGCTTACGACACAATTGGAAAAGGGGACCCTGCCTTCATGG
GCTGTTTGTTTTTCACTTTCGGGCATTACCCGTGGGCCATTGGGCACCCT
GCGGCTCCCGAGCTAGTTTGAGGCACGGCCGGGGCCCTGGAAGTTTTTAA
CACGGACATAAAATCAACGCGGAACCAGGTAACAATAGGCACCGTGAGCT
AATCGCGAGAACACCGAGAGATGCCCTTCCGGTATCGGGCATTCAACTTG
GACAAATTTGTGTCTTTGGGGCCCGGTCGGGAGTACACACCCTACGGGCA
ACGGTGTTACCAGGCGTCTGCGATGACGCGTTCATTTTTATAGTGGCCTA
TGAAAACATATTTGCTACTCTCTGTATCCCGTTTAGGTCTGAACGATACT
TCGGAAACAGGACTGACACAAAACGCACAAATGTACAACTGGTATGACGT
GCAGGGTCTAAGTCCTGTTCCACCGTACCAAGTGTCCAACCTCGCCCCGT
ACCCCTTCACAATCAGCATGAGGAAGAGGAGAAGCGCTGACAGCCAGGAG
CTAACTTTCACCATCGGAGATGAGAACTGCACGGACCCAAACGTTACCCT
CTACTGCAACGGGCCACTAAAACTCGCCACTACGTACAGGTATGTATCCA
GGTTACATATGAAATAGGTAGTATCATAAGATTTCTGTGTAGTATAGATA
GCATGCATAACATTCTGACAATAAAGCAGATTTATTGTTTCTAAAAAGGT
TGTGTTTATTATGCATTTCTTGTTGATGGCTTTGATAACTGCAAGCAAAG
TTTTCTATTTTCCTTGTCTTCAAACATTTATCATGCCTACGTGTTTTCCA
GGGCTAAGATGAGAGTGTTCACCCCAAATGGCTACTATGCAGATAGTTAC
TACTCTGATCCTGTGAGCACGCGTAAGTTCCAAATGTTTGAAACAAAATT
ACGTTTGAAACCAGCTAACAGCGTCTATTATCTAAATTGTAAACATAATG
GTTTATTCATCTTGTGCCGAAATGTGGTATCCGAGGAAAAGTATGTTGTT
ATCTAAAAAGCCATTAGATAACATTGGTGCATGGTAGGTTATTCCGATAC
ATAACTCACGACTAGAGGTAATCAAGTGAGTACGTAATCGGCAACTATTC
TGATATTCATTGATGAGATTTTATCAAGCAGTGTTTTACATATACAGTTG
CAAGTAGCTGGTCAGAATGGACACCCTGGTCTAACTGTACGGTCAGCTGC
GGCGCTGGGAACCAAACACGAAACCGTACATGTCTCACTGCTCCAGGCAA
CAGTACTGTGGCCAACTGCACCGGAGAGTCTCTTCAAACCAGGGCGTGTT
TAGACATTGGACCATGTCCAGGTAAATAAACGTAGCTTTCAGATCTTGCT
ATCTTGATAGAGGATATCATCCACTGTTGGTTTCAGTTTCATAGTACAAA
ACATTCATCGTAAGGCTGTCGTAGTGAACTTGGTTAAAACTGCTAAACAA
AACTAAAAGGCGTGAGAAATGTCATGTCTATCTCTAGCATTTTTGAATGT
CAAATAATCGTTTTCTTTTGTTGCAGTCGATGGTGTTTGGTCGCTGTGGA
GTGGTTGGTCTACTTGTATCACTGCGTGTGGACTTGGTAACCAGACACGG
AACCGTACCTGCAGTCAGCCCCTGTATGGAGGAGCAAACTGTACTGGAGA
CCGTGAAGAAACACAGACATGCACAGGTAGGACTGGTGGAGACAACAGGG
GCCTATTTTCATCAGATGTTATAAACAATATTTCGGGATAGATGTATTAA
GTTTGGAAGTGACAAATCTGACATGACAGCCATCGCCGCGTGCCTAAGAA
GCTGAGATGTCAGTCTTCATTACGGACAGTTATATGTAGTTGGTTGACCT
TACAAAAGTCACTGTGCTTTTTGATGTGTCAGTGAAGATCCTATATATTA
AAATTTGTATTGATTTACTGCACATACAGATAATATTCAAAGATTGCCGG
TTTAAACAATGGTCTTTCACATAGTTGACCTCATTAGTTTAAACGAGTGC
TTTCGAATCCATACAGTACACAACCTTGTACTACATCAGTCACTTGTGAT
CATGAATATTGCAGAATAAAGCGTTAACTATGTCGATGAGTTTTTCGCTT
ACTCGTATATAATGGAGAACGGTATTAATTCTCTTTACCATATAAAGGTC
CACTGGAGCCACACTGTACATCTACTGCCGGCCCGCCCGTCAGCACTATC
CCACAGACTACTCCTTCA Coding sequence (CDS) from alignment at Sc0000384:12596..16813+ >transcript:BL97045_cuf0 ID=transcript:BL97045_cuf0|Name=transcript:BL97045_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1389bp|location=Sequence derived from alignment at Sc0000384:12596..16813+ (Branchiostoma lanceolatum)
GGCAACTGGTCAGTATGGAGCTCCTGGTCCAACTGTAGCGTCACGTGTGG
ATTCGGTAACCAGTCGCGCAGCCGCAGTTGTGACAACCCACCTCCTCAAC
ATGGCGGCACGAACTGTACCGGGAGTTCTGAGGACGTTCAGATCTGCGAC
AGCGGCCAACAATGTGCGGTTAATGGAAATTGGTCCGAATGGAGTCCGTG
GTCCCCTTGTGACAGGAGTTGCGGTGTTGGGTCCAAAACTCGGAGCCGAA
GCTGTGACAACCCAGAGCCACTGTACGGTGGGGCCAACTGCTCCGGGACC
TCAGAGGACGTACAGACGTGTGATTCCCTGCCTCAATGTAAAGTTGATGG
AGGCTGGTCTCTGTGGTCGTCCTGGTCCAACTGTAGTGGGACGTGTGGTA
ATAGCTTCAGGATGCGCAGTCGCATCTGCGACCATCCGCCGCCTCAACAC
GGTGGATCCGTCTGTAACGGTAAACGGAGTGAGTCGGAAACATGCGGACA
AGATCCATCTTGCTACGTCCCAAGCGTGACATCCGATGCTAAGCCGGACA
GTGTGGAAAACGCCACTGTCACAGCCTCCACAGTAGCTGTTACCTTCAGC
GATCAGATGTTTTCTCTGGGAACGGGGCTGATCACCCATTTCACTGTCAT
TGTAGCAGAGGATGATGCAGGTCTGAACGATACTTCGGAAACAGGACTGA
CACAAAACGCACAAATGTACAACTGGTATGACGTGCAGGGTCTAAGTCCT
GTTCCACCGTACCAAGTGTCCAACCTCGCCCCGTACCCCTTCACAATCAG
CATGAGGAAGAGGAGAAGCGCTGACAGCCAGGAGCTAACTTTCACCATCG
GAGATGAGAACTGCACGGACCCAAACGTTACCCTCTACTGCAACGGGCCA
CTAAAACTCGCCACTACGTACAGGGCTAAGATGAGAGTGTTCACCCCAAA
TGGCTACTATGCAGATAGTTACTACTCTGATCCTGTGAGCACGCTTGCAA
GTAGCTGGTCAGAATGGACACCCTGGTCTAACTGTACGGTCAGCTGCGGC
GCTGGGAACCAAACACGAAACCGTACATGTCTCACTGCTCCAGGCAACAG
TACTGTGGCCAACTGCACCGGAGAGTCTCTTCAAACCAGGGCGTGTTTAG
ACATTGGACCATGTCCAGTCGATGGTGTTTGGTCGCTGTGGAGTGGTTGG
TCTACTTGTATCACTGCGTGTGGACTTGGTAACCAGACACGGAACCGTAC
CTGCAGTCAGCCCCTGTATGGAGGAGCAAACTGTACTGGAGACCGTGAAG
AAACACAGACATGCACAGGTCCACTGGAGCCACACTGTACATCTACTGCC
GGCCCGCCCGTCAGCACTATCCCACAGACTACTCCTTCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000384 | genome | Sc0000384:12596..16813 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97045_cuf0 |
| Biotype | protein_coding |
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