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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97048_cuf9 >transcript:BL97048_cuf9-protein ID=transcript:BL97048_cuf9-protein|Name=transcript:BL97048_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=957bp
LLRTKEEEFSQQLKTIQEEKEKALQDVQSERDSGLQQKQQELQELMSAKE
TEWQQRVEGLEREKSETLSQLEKQHAESVEAIKTEHANKLQETVQQMQTS
MQQLREEHSTQLEQLGVQHQEQLQQLHTEQENNMAEMKKNLQSDMEEQKL
QFENRIGDLVDKDLEDQATVKDLQGQLQEKSQQLQGTKDKLGEAGARLKK
LAMTHKSSVSEYQEKLESQKASFTQEVEMLRQQIKEKEEQAKLGAEELQQ
NLQSKVSEYQQQLQDITQQHRQQLEQVETKWEASLQEKSETISKMEKEAE
NLRMKFKETIQKMQEKLKTSEGTIQELQETLSGKEKQLEALQQDGSTKIE
EMGKVQAELEQARSELKHMQKTQDQIAQKFEAETQNSQTRIQELESKQQT
AEQKVGEYEKQVAQLQGEVDQLKEQLSVKEQENSQRYADLEKEKQSELEQ
RVKEVEEQGQAKLTKLKEKAEHRLGEFQSKVKSLQEELKSKAENYEVQVQ
EREARISELEKTLSDHQQQSLDSSQASQLLQTRLAELTTECQNQQEAARI
AEEKKVAEISKLQEENAKALQEQAKDLESKAKTRLGELKKKAEQKIAMAQ
SKISELQTQMQTQKQEHEATVSERETRAKELESTLQDNANHIGTLESQCK
EIQDKLKQEAEEKANLLKELEESRRTQAEGATQTETERNQLAEQLASLKQ
QLSESQEQNEGLEERLAGAQKKVAEFEHMMEFRQMQYDEVVRERDSLKEE
AEKHKDLLQKLETSENEISVFTSQIEEVKQQCEEYKAALEQKDKELSDKV
AILQQEKTEALQTQATELEEKGKSNLADLKKKAEQRIAQVKKALQEQLQE
KDKTLQHLQDSQASAAGTQAEEVSRLQTELQALQEQLQEKDKTLQQLQDS
QASAAGTQAEEVSRLQTELQAAKEQLQTERERLESDRKSLLVDLQSKLED
KENVLQE Run BLAST on NCBI mRNA from alignment at Sc0000022:1566183..1571040+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97048_cuf9 ID=transcript:BL97048_cuf9|Name=transcript:BL97048_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=4858bp|location=Sequence derived from alignment at Sc0000022:1566183..1571040+ (Branchiostoma lanceolatum)
CTCTTCTAAGAACGAAAGAAGAGGAATTCTCCCAGCAACTTAAGACAATC
CAGGAAGAGAAGGAGAAGGCACTGCAGGATGTGCAGTCAGAACGTGATTC
AGGACTGCAGCAGAAGCAACAAGAGCTGCAGGAGTTGATGTCTGCTAAGG
AGACCGAGTGGCAGCAGAGGGTAGAGGGGCTGGAGAGAGAGAAGTCAGAG
ACTCTGTCCCAACTAGAGAAGCAGCATGCTGAGTCTGTGGAAGCTATTAA
GACTGAGCATGCAAACAAGGTATGGATCAAAATTCTGTGCCACTCTTACA
TTTTTGTACAAAATAAAGTGTTCTTGGTCTTTGGTGATACATGTGTATGT
CAATGTTTTTTTTTTCAATATTGAGTTGATGTTTTGGTGTTACAAAATTC
TGTTACAGGATAGAAATTGCAACTACCAGACTGAGTATTGTTATACATGT
ATGCATAGAAATCAGTAGTATATGTTGCACTTTTGATATACCAAGTCAAA
TGTTTTAAACCAGAATACGATTTACTTCAGAATCTTTATTCCAACTTGTA
ATAGAGAGGTTTTTTTCTTTAACGTATGTTTGTTCTGTTGCAGTTGCAGG
AAACAGTACAGCAAATGCAGACCTCAATGCAGCAACTCCGAGAGGAGCAC
TCCACACAGCTAGAACAACTGGGAGTTCAGCACCAAGAACAGCTACAACA
ACTCCACACAGAACAGGAGAACAACATGGCAGAGATGAAGAAAAACCTGC
AGTCAGACATGGAGGAACAAAAGCTACAGTTTGAGAACAGAATAGGAGAC
CTTGTCGACAAAGACTTAGAAGACCAAGCTACAGTTAAAGACCTTCAAGG
GCAGCTTCAAGAGAAGTCTCAGCAACTTCAGGGGACGAAAGACAAGCTTG
GAGAAGCAGGAGCACGACTTAAGAAGCTTGCGATGACGCACAAGTCTTCG
GTAAGCGAGTACCAAGAGAAGCTGGAGTCTCAGAAGGCTTCCTTCACCCA
GGAAGTTGAGATGCTGAGGCAGCAAATCAAGGAAAAGGAGGAACAGGCCA
AACTTGGGGCAGAGGAGCTGCAGCAAAACCTGCAGAGCAAAGTGTCTGAA
TACCAGCAGCAGCTGCAGGATATCACGCAGCAGCACCGGCAGCAGCTGGA
ACAGGTGGAGACCAAATGGGAGGCCTCTCTTCAAGAAAAGAGCGAGACAA
TCTCAAAAATGGAAAAGGAGGCAGAAAACTTGAGGATGAAGTTTAAGGAG
ACAATCCAAAAGATGCAGGAGAAGTTGAAGACCAGTGAGGGCACCATCCA
GGAGTTACAAGAAACACTGAGTGGTAAGGAAAAGCAGCTTGAAGCACTTC
AACAGGACGGTAGCACCAAGATAGAGGAGATGGGTAAAGTGCAAGCTGAA
TTGGAACAGGCAAGGAGTGAGCTAAAACACATGCAGAAAACTCAAGACCA
GATAGCACAAAAGTTTGAAGCAGAGACACAGAACAGCCAGACCAGGATAC
AAGAGCTGGAATCCAAACAGCAAACAGCTGAACAGAAGGTCGGGGAGTAT
GAAAAGCAGGTGGCACAGCTGCAGGGGGAGGTGGATCAGCTGAAGGAACA
GCTGTCAGTCAAAGAGCAGGAAAACTCACAGAGGTATGCAGATCTTGAGA
AAGAAAAGCAGTCAGAATTGGAGCAGCGTGTCAAGGAGGTTGAAGAACAG
GGCCAGGCCAAGCTTACAAAACTCAAGGAGAAAGCTGAGCACAGGCTTGG
GGAGTTCCAATCCAAGGTCAAAAGCCTCCAGGAAGAGCTCAAGTCCAAGG
CAGAAAACTACGAGGTTCAAGTTCAGGAGAGGGAAGCTAGAATATCAGAA
CTGGAAAAGACACTTTCAGACCATCAGCAACAGAGTTTAGATAGTAGTCA
GGCAAGCCAGCTGCTACAAACACGGCTTGCAGAGCTCACAACCGAGTGTC
AAAACCAGCAGGAAGCTGCGAGGATAGCAGAAGAGAAAAAGGTGGCAGAA
ATCTCAAAGCTTCAGGAAGAGAATGCCAAGGCTTTACAGGAGCAGGCTAA
AGACTTGGAGAGCAAAGCAAAAACTCGACTTGGAGAACTGAAGAAGAAGG
CAGAACAGAAGATTGCCATGGCTCAAAGCAAGATCTCAGAACTACAAACA
CAGATGCAAACACAGAAACAAGAGCATGAGGCCACAGTGTCTGAAAGAGA
GACGAGAGCAAAAGAACTCGAGTCTACTTTACAAGACAACGCCAACCATA
TAGGCACACTAGAATCCCAATGTAAGGAGATCCAAGATAAGTTAAAACAA
GAGGCTGAAGAGAAAGCTAACTTATTAAAGGAGTTGGAAGAGTCAAGGAG
GACACAGGCTGAAGGAGCAACACAGACGGAAACTGAAAGAAACCAACTGG
CAGAACAGTTAGCCTCCTTGAAGCAGCAGCTGTCAGAAAGCCAAGAACAG
AACGAAGGATTGGAAGAAAGGCTGGCGGGAGCTCAGAAGAAGGTTGCAGA
ATTTGAGCACATGATGGAGTTCAGGCAGATGCAGTATGATGAAGTCGTCC
GAGAAAGGGACTCTCTTAAAGAGGAGGCAGAGAAACACAAGGATCTACTG
CAGAAGCTTGAGACAAGCGAGAATGAAATAAGTGTCTTCACCAGTCAGAT
CGAAGAAGTCAAGCAACAGTGTGAGGAGTACAAAGCTGCCTTAGAGCAGA
AGGACAAGGAGCTGTCTGACAAGGTCGCCATCTTGCAGCAGGAGAAGACG
GAAGCCCTGCAGACTCAAGCAACAGAACTGGAAGAAAAGGTATCAGGTTG
CTTGTTGATAGTGGTCTTTATGAGCTGCCAATAAGGGCTTCTAGTCTTTG
TGGGGTACAGAGTAAAACAGACGTCAAGTATGAATATTGTTTTTACAAAT
ACATGAAATTGTATCCTGCCGCAATGTTAAATTGTAGTTTCAAACACTAA
AATTGGATGTACCCAAATACCCAAATCTTTAACTGTCCAACTCCAGTCCA
AATAATGATTTCTATCAAGTTGAAAACAGATAAACCTCCAAAATATGAAA
TTGTTTATTTCTTCTTTTAATGTCCTTTGATGCTGCTATTCATTCTTTGC
TTACTGACTAATTTCATTCTTTATCTATCAATATCATAGTAAACTGTTTT
TGTTTAATATGTAATATGTACTGTTGATGTTCTGGAATGAAATTGTCTCT
CTTTCTTGTCGCTTGCAGGGGAAATCCAATCTTGCCGACCTGAAGAAGAA
GGCAGAACAGAGGATTGCTCAAGTGAAGAAAGCATTGCAGGAACAGCTGC
AGGAAAAGGACAAGACCTTGCAGCATCTGCAGGATTCCCAGGCTTCTGCT
GCAGGAACCCAGGCAGAGGAGGTTTCTAGGCTGCAGACAGAGCTGCAAGC
CCTGCAAGAACAACTGCAGGAAAAGGACAAGACACTGCAGCAACTGCAGG
ATTCCCAGGCTTCTGCTGCAGGCACGCAGGCTGAGGAGGTTTCAAGGCTG
CAGACAGAATTGCAAGCTGCCAAAGAACAACTGCAAACTGAAAGGGAAAG
GTGAGTACAAAAGAAAAAAAACTGTTCACTTCAATTTCTGTCAATTGGGA
GAACTTTTCCCATCAGATGTCTACCTACATTTAAATTTTCAGATCCACAA
TGGTTTACTTGATATGACTTTGGAGCTCAATGATAGTTTGGTTANCAAGC
AACAGAACTGGAAGAAAAGGTATCAGGTTGCTTGTTGATAGTGGTCTTTA
TGAGCTGCCAATAAGGGCTTCTAGTCTTTGTGGGGTACAGAGTAAAACAG
ACGTCAAGTATGAATATTGTTTTTACAAATACATGAAATTGTATCCTGCC
GCAATGTTAAATTGTAGTTTCAAACACTAAAATTGGATGTACCCAAATAC
CCAAATCTTTAACTGTCCAACTCCAGTCCAAATAATGATTTCTATCAAGT
TGAAAACAGATAAACCTCCAAAATATGAAATTGTTTATTTCTTCTTTTAA
TGTCCTTTGATGCTGCTATTCATTCTTTGCTTACTGACTAATTTCATTCT
TTATCTATCAATATCATAGTAAACTGTTTTTGTTTAATATGTAATATGTA
CTGTTGATGTTCTGGAATGAAATTGTCTCTCTTTCTTGTCGCTTGCAGGG
GAAATCCAATCTTGCCGACCTGAAGAAGAAGGCAGAACAGAGGATTGCTC
AAGTGAAGAAAGCATTGCAGGAACAGCTGCAGGAAAAGGACAAGACCTTG
CAGCATCTGCAGGATTCCCAGGCTTCTGCTGCAGGAACCCAGGCAGAGGA
GGTTTCTAGGCTGCAGACAGAGCTGCAAGCCCTGCAAGAACAACTGCAGG
AAAAGGACAAGACACTGCAGCAACTGCAGGATTCCCAGGCTTCTGCTGCA
GGCACGCAGGCTGAGGAGGTTTCAAGGCTGCAGACAGAATTGCAAGCTGC
CAAAGAACAACTGCAAACTGAAAGGGAAAGGTGAGTACAAAAGAAAAAAA
ACTGTTCACTTCAATTTCTGTCAATTGGGAGAACTTTTCCCATCAGATGT
CTACCTACATTTAAATTTTCAGATCCACAATGGTTTACTTGATATGACTT
TGGAGCTCAATGATAGTTTGGTTAACCTGACATTACTCACCATTGTATGG
GTATTCAAATACCTTTTGAGGGAAAGATTGGAGATTTAAGAGAAAAAGCT
ATGTCTCTTGACTGTTATCACTTTACTTTACCTGTACATGGTCTATTATC
TAAGGCATTTTTGCATTTCTTAAATCTCTCAGACTGGAGTCAGACAGAAA
GTCTCTGCTAGTTGACCTGCAGTCCAAACTGGAGGACAAGGAGAATGTCC
TCCAGGAA Coding sequence (CDS) from alignment at Sc0000022:1566183..1571040+ >transcript:BL97048_cuf9 ID=transcript:BL97048_cuf9|Name=transcript:BL97048_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=2871bp|location=Sequence derived from alignment at Sc0000022:1566183..1571040+ (Branchiostoma lanceolatum)
CTTCTAAGAACGAAAGAAGAGGAATTCTCCCAGCAACTTAAGACAATCCA
GGAAGAGAAGGAGAAGGCACTGCAGGATGTGCAGTCAGAACGTGATTCAG
GACTGCAGCAGAAGCAACAAGAGCTGCAGGAGTTGATGTCTGCTAAGGAG
ACCGAGTGGCAGCAGAGGGTAGAGGGGCTGGAGAGAGAGAAGTCAGAGAC
TCTGTCCCAACTAGAGAAGCAGCATGCTGAGTCTGTGGAAGCTATTAAGA
CTGAGCATGCAAACAAGTTGCAGGAAACAGTACAGCAAATGCAGACCTCA
ATGCAGCAACTCCGAGAGGAGCACTCCACACAGCTAGAACAACTGGGAGT
TCAGCACCAAGAACAGCTACAACAACTCCACACAGAACAGGAGAACAACA
TGGCAGAGATGAAGAAAAACCTGCAGTCAGACATGGAGGAACAAAAGCTA
CAGTTTGAGAACAGAATAGGAGACCTTGTCGACAAAGACTTAGAAGACCA
AGCTACAGTTAAAGACCTTCAAGGGCAGCTTCAAGAGAAGTCTCAGCAAC
TTCAGGGGACGAAAGACAAGCTTGGAGAAGCAGGAGCACGACTTAAGAAG
CTTGCGATGACGCACAAGTCTTCGGTAAGCGAGTACCAAGAGAAGCTGGA
GTCTCAGAAGGCTTCCTTCACCCAGGAAGTTGAGATGCTGAGGCAGCAAA
TCAAGGAAAAGGAGGAACAGGCCAAACTTGGGGCAGAGGAGCTGCAGCAA
AACCTGCAGAGCAAAGTGTCTGAATACCAGCAGCAGCTGCAGGATATCAC
GCAGCAGCACCGGCAGCAGCTGGAACAGGTGGAGACCAAATGGGAGGCCT
CTCTTCAAGAAAAGAGCGAGACAATCTCAAAAATGGAAAAGGAGGCAGAA
AACTTGAGGATGAAGTTTAAGGAGACAATCCAAAAGATGCAGGAGAAGTT
GAAGACCAGTGAGGGCACCATCCAGGAGTTACAAGAAACACTGAGTGGTA
AGGAAAAGCAGCTTGAAGCACTTCAACAGGACGGTAGCACCAAGATAGAG
GAGATGGGTAAAGTGCAAGCTGAATTGGAACAGGCAAGGAGTGAGCTAAA
ACACATGCAGAAAACTCAAGACCAGATAGCACAAAAGTTTGAAGCAGAGA
CACAGAACAGCCAGACCAGGATACAAGAGCTGGAATCCAAACAGCAAACA
GCTGAACAGAAGGTCGGGGAGTATGAAAAGCAGGTGGCACAGCTGCAGGG
GGAGGTGGATCAGCTGAAGGAACAGCTGTCAGTCAAAGAGCAGGAAAACT
CACAGAGGTATGCAGATCTTGAGAAAGAAAAGCAGTCAGAATTGGAGCAG
CGTGTCAAGGAGGTTGAAGAACAGGGCCAGGCCAAGCTTACAAAACTCAA
GGAGAAAGCTGAGCACAGGCTTGGGGAGTTCCAATCCAAGGTCAAAAGCC
TCCAGGAAGAGCTCAAGTCCAAGGCAGAAAACTACGAGGTTCAAGTTCAG
GAGAGGGAAGCTAGAATATCAGAACTGGAAAAGACACTTTCAGACCATCA
GCAACAGAGTTTAGATAGTAGTCAGGCAAGCCAGCTGCTACAAACACGGC
TTGCAGAGCTCACAACCGAGTGTCAAAACCAGCAGGAAGCTGCGAGGATA
GCAGAAGAGAAAAAGGTGGCAGAAATCTCAAAGCTTCAGGAAGAGAATGC
CAAGGCTTTACAGGAGCAGGCTAAAGACTTGGAGAGCAAAGCAAAAACTC
GACTTGGAGAACTGAAGAAGAAGGCAGAACAGAAGATTGCCATGGCTCAA
AGCAAGATCTCAGAACTACAAACACAGATGCAAACACAGAAACAAGAGCA
TGAGGCCACAGTGTCTGAAAGAGAGACGAGAGCAAAAGAACTCGAGTCTA
CTTTACAAGACAACGCCAACCATATAGGCACACTAGAATCCCAATGTAAG
GAGATCCAAGATAAGTTAAAACAAGAGGCTGAAGAGAAAGCTAACTTATT
AAAGGAGTTGGAAGAGTCAAGGAGGACACAGGCTGAAGGAGCAACACAGA
CGGAAACTGAAAGAAACCAACTGGCAGAACAGTTAGCCTCCTTGAAGCAG
CAGCTGTCAGAAAGCCAAGAACAGAACGAAGGATTGGAAGAAAGGCTGGC
GGGAGCTCAGAAGAAGGTTGCAGAATTTGAGCACATGATGGAGTTCAGGC
AGATGCAGTATGATGAAGTCGTCCGAGAAAGGGACTCTCTTAAAGAGGAG
GCAGAGAAACACAAGGATCTACTGCAGAAGCTTGAGACAAGCGAGAATGA
AATAAGTGTCTTCACCAGTCAGATCGAAGAAGTCAAGCAACAGTGTGAGG
AGTACAAAGCTGCCTTAGAGCAGAAGGACAAGGAGCTGTCTGACAAGGTC
GCCATCTTGCAGCAGGAGAAGACGGAAGCCCTGCAGACTCAAGCAACAGA
ACTGGAAGAAAAGGGGAAATCCAATCTTGCCGACCTGAAGAAGAAGGCAG
AACAGAGGATTGCTCAAGTGAAGAAAGCATTGCAGGAACAGCTGCAGGAA
AAGGACAAGACCTTGCAGCATCTGCAGGATTCCCAGGCTTCTGCTGCAGG
AACCCAGGCAGAGGAGGTTTCAAGGCTGCAGACAGAGCTGCAAGCCCTGC
AAGAACAACTGCAGGAAAAGGACAAGACACTGCAGCAACTGCAGGATTCC
CAGGCTTCTGCTGCAGGCACGCAGGCTGAGGAGGTTTCAAGGCTGCAGAC
AGAATTGCAAGCTGCCAAAGAACAACTGCAAACTGAAAGGGAAAGACTGG
AGTCAGACAGAAAGTCTCTGCTAGTTGACCTGCAGTCCAAACTGGAGGAC
AAGGAGAATGTCCTCCAGGAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000022 | genome | Sc0000022:1566183..1571040 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97048_cuf9 |
| Biotype | protein_coding |
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