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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97051_cuf1 >transcript:BL97051_cuf1-protein ID=transcript:BL97051_cuf1-protein|Name=transcript:BL97051_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=312bp
SNVMHLNFSNNEISYIGARAFLQLTNLKILELHRNLMSTIGWNTFDNYHS
LLHIDLNYNKLKKLPSRSFTNMGELRTLILHNQQAPDGMAAIMFDAFYNL
TQLTTVFISKNNFTTFPHPAFSEEDWPNLRYIHADNNKIVNVTEYSSNAF
DGVYLSLYAARRRLHEGHPFSKLSSVQTLWLSNNNIASIRENDLCNLTSL
TTLELGSNSLDETTLQAGSFRCLGNLRNLRIGSNHIQYLPVSTYDDVYPP
VVQELDLRSNRLTFLLEGTFSNLTSLFNLILNSNKIITVEDGTFPDQIGA
IYLQNNIYFDFR Run BLAST on NCBI mRNA from alignment at Sc0000022:2588391..2592139+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97051_cuf1 ID=transcript:BL97051_cuf1|Name=transcript:BL97051_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=3749bp|location=Sequence derived from alignment at Sc0000022:2588391..2592139+ (Branchiostoma lanceolatum)
TCTAATGTCATGCATCTGTAAGTATGATTAAAGCATTTAACTTTGAACAG
CTATCTTGATCCGTCAAACTTAAAACTACTATTCACTTGATGATACATGA
AATACATGATATTCTGAATGGTTAGTGGTTGGTGCTGTAAATTGCTCTTT
TTTCACAGGAATTTCAGCAACAACGAGATCAGTTACATCGGAGCCAGGGC
GTTTCTTCAGCTGACAAATCTTAAGATTCTGTAAGTACTTATTTCGTAAT
TCTTGTTTCTAATGGTTTTCAGCTGTAATGAACAATGAAAATAATAGATC
GCCTCGTTACATGGTATGCAAATCATTCATTTTGCAGAGAGCTTCACCGG
AATTTGATGTCTACCATTGGATGGAACACTTTCGACAACTATCACAGCTT
ACTTCACATGTAAGTATATATCATCTTCACTTAACCCGTTGTCGAACATT
TTGAAAGGAAGATATGTAGCGAGTGCGTCTGCGATACCAATACGTTACTT
ACAGAATCCTTCCTGGAGAATCTTTTGTCGTCATGTTATCACTGGGTTTT
CTCCATTTAGGTGCACTGATGATATCTAACGTTTGAACGTTTTAATAGTT
GCACAGCGTTATATTGATAGGTATGCATTTCGTTACAGATACATTGAAGA
ACAGGTCTTTAAATATTTGTTTTCTGCTTTGTCTATAGAGATTTAAACTA
CAACAAGCTGAAGAAGCTACCAAGTCGCTCCTTCACGAACATGGGAGAGC
TGAGAACATTGTAAGACTCATGTCATTCATGAAAATCAAATTCCACTAAG
AATGCCTATTCATCTCTTCACTTACATCGATGTCACTCTAATGATTGATT
GCCATTACAAGTACATAGAAGAGAGGAGAAGTCGAATTCACCTGGTAGAT
TATGATTCTTGTAGTAGATTTACTATGTATACATGTATCTGTAAACTATT
CTTATGAACGTTGTGCTTTTACTTGCACCTAAGCCAGTTGGTATATATGT
ACAATAGGCTTCATTAATTAATTCAATAAGATATAATGCTATATTTCCAG
GATCCTACACAATCAACAGGCACCAGATGGCATGGCAGCAATCATGTTCG
ACGCCTTTTACAACCTTACTCAACTAACAACCGTGTAAGCCCAGATTGCA
CTCGTTTTTACGTTCACTTGAGATCGAGTAACAGTTGTCTTACTTTACGT
AAGTTTAAACTATAGTTATATTCCACCCTATGCTATGGTACTTATTGTGT
AGACTAAATACATTCCTAATAATCTTTGACTTGTTTATTTCAGGTTCATC
AGTAAAAATAACTTTACCACATTTCCACATCCGGCATTTTCTGAAGAGGA
TTGGCCCAATCTGCGATACATGTAAGCTTTCATTGATATAGCCATCTTGC
CGTTACAATGACAAATAAACATAATTGAACCTATCACATCACATTCCTAT
TGTTTGCTTTGTTCACATATTTTTTGTAATCACTTTTTCTAAACTGATGA
TTCGCAAGTTCTTGTCAAGTCGATGACGCATCAAGCTTGTTAAGTGGCTG
TATGTATGGACAAAAGAGAGCCAGAATGATGAATATGATGTTCACAAAAA
CTGTCTCACAAACCTACCCTACAGACATGCAGACAACAACAAAATCGTCA
ATGTGACTGAATACTCCTCCAATGCCTTCGATGGTGTATACCTGTCTCTG
TACGCGGCAAGGAGACGCCTACACGAGGGTCACCCATTTTCTAAGCTGTC
GTCTGTACAGACCTTGTGAGTAAAATACTATTTTTTTTGCTGACATCATG
GTGAACTAAAATCATTATTGGAAGTAATAGTTTAATAGCGTTGAAGCGTA
ACAGGTCTATAGGTTATTCTAAAAGACAGAGTTTACATACATAGCACGAA
TAATGAAATTGCAAAGTAAAGCATGATATTTTTACAGACAGTAGCTTGTT
ATATGGCAAACAATCTGTTTCCACCCGCAATGGCAATCGCAATATAAAAT
TTATTTGTATGATTTTTTTCTCATTTCTTTTCAGATGGCTTAGCAACAAC
AACATAGCGTCTATTCGTGAGAATGACTTGTGTAATCTGACGAGCCTAAC
AACTCTGTAAGAAAACGTATAATTACCATCACGTTATATCTATCAATTCA
TTTCTAAATTTGAAAAGAAATATATCAATATTTCTCTTGCAGTGTTGCAC
AAGTATCAATGTAATGCATTTCATTCTTGCTGCTCAGTGAACTTGGTTCC
AACTCGTTGGATGAAACAACGCTACAGGCTGGTTCATTCCGATGTCTTGG
TAATCTCAGAAACCTGTAAGTTTTCACTGAGCATTTATCTCGTTCAGAAC
TTAACTCAAAAGTTTAGTCCCCTTGCATGAATTAGTACAGTTAGCAAATA
TACTCTACATTCCGTTTAATGTGATTATCATCAGTTTGCAAACTTGCGCA
TTTCTTAAATGTTTGAAAACATTCTTTTTACATGGTAGACAGAATGTTCA
TATGTTTTATAAGAGACAATAGACAATACAGTGGAAATGTGTTCTTGCAG
ACGTATTGGTAGTAACCATATCCAGTACCTACCAGTTTCAACGTACGATG
ACGTATATCCGCCAGTTGTCCAGGAACTGTAAGTACCTATGAGCTAGATT
TATGTGTATGTATATATATATATGTATATGTTTATGTACATAAAATGTAC
ATATGCGGTAGATACGGTATACCTTAATCTATAAACAACTACTCAATTCT
TGTTGATTGGTTTTGTAATGTTGTAAGCCATGCTTTCATTCCGTTTATTT
GTGGTTCTTCTAATTCTGTTTATTGAATTTAAGTTGTTATGGACAAAGTC
ACCCGAGTCTTGGTCTGTGATCTTCAAATGTACCAACAATAGTTTTCAAA
TGATTGTAATTGAGAACTGAGAAAGGCTCTTTGTGAATGGTTATAAAATG
ATATGATTGATTGGAGTCTGTCTGTCATCTTGTAAAAATGCCATTTTCAT
ACTAGGGACCTTCGCTCCAACCGACTTACCTTTCTGTTGGAGGGAACCTT
CAGTAACCTGACATCTCTGTTCAATCTGTAAGTAATTAATACATAACTAT
GCGGATAATCTATACTGTATTGTGCTGTACTGAACACACTGTATAGCTGT
ACTGAAAATAATGAGTGACAAATAGTATGATAAGTTTTTTTCTTTGTCTG
AAATACACTGTACTCTTAAGTTGTGTATCTGAATCTTTTGTCACTACTTT
GATCCATTTCAGTCTGTCTATTTGACTATCAAAGAAAAAAGATCATTTAC
CTAAATTACCTGAAAAGTTTACACTGAAATACGTTGCCTGCCGAAATGTT
TGATTGATGAGTAAAACTAACAGTACAAAATGAATATACTTTTGACAACT
TTTATTACCATGTGATAATATCTTTTTCTACAACTCAGGATCCTGAACTC
AAATAAAATCATCACAGTTGAAGACGGAACATTTCCAGACCAGATTGGTG
CCATGTAAGTTTTGTGTGTCTAATATGTTATGGCCCTCTGCCAATCTTAT
TGCAGATTGTTTTACATTTCCTACGACATGTCATTGTTGACGCCTCTACT
ATCACTTATTCTGAAATAGGCACAGAGCTATCTGTGGAGAAATATAGTTG
CTTCCTTAAGAAATATAAGTACCAAAGTACGTAAGTAAAACATGTAAAAT
TGAATTTTTCCCCAGATACCTTCAGAACAATATTTACTTCGACTTTCGC Coding sequence (CDS) from alignment at Sc0000022:2588391..2592139+ >transcript:BL97051_cuf1 ID=transcript:BL97051_cuf1|Name=transcript:BL97051_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=936bp|location=Sequence derived from alignment at Sc0000022:2588391..2592139+ (Branchiostoma lanceolatum)
TCTAATGTCATGCATCTGAATTTCAGCAACAACGAGATCAGTTACATCGG
AGCCAGGGCGTTTCTTCAGCTGACAAATCTTAAGATTCTAGAGCTTCACC
GGAATTTGATGTCTACCATTGGATGGAACACTTTCGACAACTATCACAGC
TTACTTCACATAGATTTAAACTACAACAAGCTGAAGAAGCTACCAAGTCG
CTCCTTCACGAACATGGGAGAGCTGAGAACATTGATCCTACACAATCAAC
AGGCACCAGATGGCATGGCAGCAATCATGTTCGACGCCTTTTACAACCTT
ACTCAACTAACAACCGTGTTCATCAGTAAAAATAACTTTACCACATTTCC
ACATCCGGCATTTTCTGAAGAGGATTGGCCCAATCTGCGATACATACATG
CAGACAACAACAAAATCGTCAATGTGACTGAATACTCCTCCAATGCCTTC
GATGGTGTATACCTGTCTCTGTACGCGGCAAGGAGACGCCTACACGAGGG
TCACCCATTTTCTAAGCTGTCGTCTGTACAGACCTTATGGCTTAGCAACA
ACAACATAGCGTCTATTCGTGAGAATGACTTGTGTAATCTGACGAGCCTA
ACAACTCTTGAACTTGGTTCCAACTCGTTGGATGAAACAACGCTACAGGC
TGGTTCATTCCGATGTCTTGGTAATCTCAGAAACCTACGTATTGGTAGTA
ACCATATCCAGTACCTACCAGTTTCAACGTACGATGACGTATATCCGCCA
GTTGTCCAGGAACTGGACCTTCGCTCCAACCGACTTACCTTTCTGTTGGA
GGGAACCTTCAGTAACCTGACATCTCTGTTCAATCTGATCCTGAACTCAA
ATAAAATCATCACAGTTGAAGACGGAACATTTCCAGACCAGATTGGTGCC
ATATACCTTCAGAACAATATTTACTTCGACTTTCGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000022 | genome | Sc0000022:2588391..2592139 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97051_cuf1 |
| Biotype | protein_coding |
|
