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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97052_cuf2 >transcript:BL97052_cuf2-protein ID=transcript:BL97052_cuf2-protein|Name=transcript:BL97052_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=337bp
HTVTSRYIYFQGNPVSTLESYAFDDVTVTNNLHLSNMDFTVIPPRTFNQV
TAYDLVMSGNTQLTSIEEEAFDVTITHSLDLSSNAIKVVRGKIFSNVSVV
KELHLENNLIYYIDPDAFDGVTLTLINLDNNALLTLDSNLLSTQGSLKNL
SMANNRLQQIPNGFLGSLVQLGTLSLSGNLIEMVESTTFDNLASLEELDL
SNNRIQFLADGVFDGIKNNAKITIDLSGNPLACSCSMVTMMANLWNLTTI
TGGECATPAQAVGVSFVSSQRNASNNYFLSVCPETFVCAPENVQALASGQ
NEITVSWTPPTSTYPSHPQFEMFTSGCSDTATNSSFW Run BLAST on NCBI mRNA from alignment at Sc0000022:2596032..2600152+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97052_cuf2 ID=transcript:BL97052_cuf2|Name=transcript:BL97052_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=4121bp|location=Sequence derived from alignment at Sc0000022:2596032..2600152+ (Branchiostoma lanceolatum)
CACACAGTTACCAGTCGATACATGTAAGTATGAAGTTACTTAACTATACG
TCTGGAGCTCTAGAAGCCGAAGTAATTTCATGTGCAAAGCTGGAATTCTT
TTCATTTACTTTTCAAACTCAACATTCTAAACAACCAGCGAAGATTTTGC
GTAGATATTAGTCATGTAATGGATTGTAGACAGCAAGCCTGAAGAATTAA
CTCTACCCTTGGTCCCGTATTCCAATCATGTATTCTACCACTTCAATGAT
GGTAACCAAATCCTGATTATTCTGTTACAGCTACTTCCAGGGCAACCCTG
TCTCAACTCTTGAATCTTATGCTTTTGATGACGTTACCGTCACCAATAAT
CTGTAAGTCCGTGCAAATATGTAACAAATATTTTGCTGTCATTTATCATT
TTCAATGTTTCTTCCATCCAGAGAATAGGGTTACAGCCTCTGGCTCATTT
TCCTTTTTGATACAATTTTGCCATTCCGACAAAAGAGTACTTTTTATGGT
GTAGCTGTTACATCTTGTGTACATGAAGGTCTGCGCCAAAAATATTCATT
TTATGCCGGCTAAAAAAAATATGTATCTCCGTCTGAAAACATTTCTGGGC
ATCAGCTTTAATCAATGGATGTAACTGCATTAAGAATATGATCAAGGTCC
AGTTAATCTTAACAATGCCAAACAGCAGTTGAAGTAAATTTAATAGTGAC
ACCAAAGTCAAGCTACATCTCACCACACGTACAACTGTGTGGTTTTAGAG
TTCTTTTTTTTCAGACATGACCTCATATTCTTTTCACAGGCATCTAAGTA
ACATGGACTTTACAGTGATACCACCACGCACGTTTAACCAAGTTACAGCC
TACGATCTGTAAGTAACGTAAGCTACAAACATTTTATGTCATTGTATGAA
ATTAAAACATAGTACTGTATGTTCATTTGAATGGGTCAACCACCCTTCGG
CATTATGCATCAGCTAATATTTGATATTGATATATCGATTCAAATAATCT
GTATTGATCAAATAAACTTGAGAAGCCATATTGAAATCTAAAGGTAACGG
ACAACATGTTATGTTATGTTATGTTATGTTATGTTGTGTTAACGGTAACG
TGGGAATGGTCATGTTATCGTATCATTTGTTTCCAGGGTTATGAGTGGAA
ACACCCAGCTGACTTCGATAGAGGAAGAAGCCTTCGATGTAACTATCACC
CACAGTCTGTGAGTTTCTACATCCATCTTAATTAAATGTAGCTTAAATGC
AGGTCATTACAGCTTACATATGAATGAATGAACTTTATTGCTCATCAATC
GCACATGGCACAATGTATGGCACTAAATCAACAATACTAGAAGGCTTACA
TAGGATACCGTCACTTGCCTCAATAAAAGCCTTTTTATCACATTAGTATG
TATATAGCTGTAACAAATTTTGCGTTGTATGTTGTTTTTTGTACTCAAGG
GAGATTAGCTACTTACTTGTTACTTGTATCATAGCTAATGGAGGAAATAA
AGTATCAAAGTACCAAGTCACAGCCAAGAGCTACATGTATTCATATGTCC
TGCAGTGTGTTTCTTTTGTACCATGTGTGTTCTTACTTACTACTGTGGTC
AAATCTATACATTTTCAACAAAGAATTTGTTCTGCATTGAACTGATTATG
TCCATCTTTATAATTGACAGCGATCTATCAAGCAACGCCATTAAGGTAGT
GAGAGGGAAAATCTTTAGTAACGTATCAGTCGTCAAGGAGCTGTGAGTCA
CTTTTTTAATTTCTTCTTAAATTCTCTTTAGATTTTAAAACATTTTACCA
AATATTTTATAGCCTTATTATTCAATATTCTTGTTTAAAGATATTGTTCT
TTTCTAGACACCTTGAAAACAACTTGATCTACTACATTGACCCTGATGCA
TTCGACGGCGTAACCCTAACCCTGATGTGAGTACCGCTTACCGCCTATCT
TTTCAATCACTTTTATGCCAAATTATGCTGAAGATCATTCTAAGGAATCG
AACTGCTAAAATGTATCTACTGTTTTTCACGAAAGGCCTATATAAAGCAG
CTTAATAAGTTTAAACACTAGATGACTTGCATACAATGGTAACTAAACTT
TATGCACATGCATGTAACACATGTTTCTTTTTTTATACTGCATGTATTGA
CCTAACCATTTTTTAAAATATTTTCTTTTGTGTTTTTTTCAGCAATCTTG
ACAACAACGCATTGTTGACATTGGACTCAAATCTGCTCAGCACACAGGGA
AGTCTCAAAAACTTGTAAGCCTGACATTCTATTCGTATTTCTCATTATGT
ATTTATTGGTATATACTTAAAGACCACTACTACCTGATTCCTTCTAGCCA
TACGAAATTGCATGTTTATGAATCATCTAATTCTTTGTTTGCCTACTTTC
AGGTCCATGGCAAATAACCGACTTCAACAGATACCAAATGGTTTCTTAGG
GTCCCTTGTGCAGCTTGGAACCCTGTGAGTTTACCATTCTGCACTTGACA
CTGTGAAACATATCCCATATTTGTTTCTATCCTACATTTGTGCATGCATT
GTCCAAAATGTTTCAATTTCATCATTTTGCAGATCTCTGTCGGGGAATCT
GATTGAAATGGTTGAGTCGACGACCTTCGACAATCTAGCAAGTCTTGAAG
AACTGTAAGCGTTGACCTATTATGAAACCATTGTTGAATCCTTTTGTTTA
GCGTTTGATGCAACTATCCACAACGCCTTGTTGCCGAATGCATAATTGCC
CTGTCAAGAAACAATACGCTGTTCTTCTTTCTTACCTCTTTTATCCAAGC
TGTTGTTAATCATTGTTATCGTTATAGCCGTTAAAAATAGGTGTGATCTT
GAAAGTTCATGATATACTACGCCAAAAATAGTTACTCAGGCAACGAGGTA
AAATTTTGAAATTCATCCAGTTGCTTGAGTAACTATTTTTGGCATATCTT
ATTACCTGGTTGTCCAACCTTCATCAGCGTATGAGATAGTTTGTGTAAGA
GCTACTCTCTTATTCAAGTAAGGGCCATGTATAGACTAAATTCACAAGTC
CAAATCCATTCCTCTTTGGAATAAGGTCATGATTCATCATTTGGAGTTGA
AGATTTTATACTACATTCATTTTATCCCCTTGCACATCAACGTCTCTGTT
ATTGCTGCCAAGCTGATTCCAATCATTTTAACATGTTCCAGTGACCTATC
CAACAACAGAATCCAGTTCCTAGCAGACGGTGTCTTTGACGGTATCAAGA
ACAACGCAAAGATCACGATGTAAGGAAAGATGAGACACTTAGAACTATAG
ATTGTAGCTACCTGCTATCAAGACCAAATGTAAGGCCCTTCTCGCTGTAA
ACAAACTAAGTAACGTTAAATGGTCATGGTAGAAGTATGTATCTTGTGTA
GTTGCTATCAAGTGACGCTTAAATTTTTCGTTCTTTTCGAATTCATTGTA
ATCACATATACAAGGCTCGCCCAGTCCAACCATCGCAGAAAGCATCTTCA
ATTGTTACTTCCAAAACGTACTTTCACACCGTACGACCAATTTAACGTGC
ATTTTTTCAGCGACCTGAGTGGCAACCCTCTAGCCTGCAGCTGCTCTATG
GTTACTATGATGGCGAACTTATGGAATCTTACCACCATTACTGGGGGTGA
ATGCGCTACTCCTGCCCAGGCAGTTGGCGTGTCCTTCGTCTCCTCACAAA
GAAATGCCAGCAATAACTACTTCCTCTCCGTGTGCCCTGAGACATTCGTA
TGTGGTGAGTGAACAATATATGAAATGTTTTCTGCATTTTCCTGAGTTTT
ATTTTTACCTCCGTAAAAGGATGTATTTTTTTTTCTTTTGCTACGTATCA
TTGTTATCTGGACGAACAACAACATTGAATCATCAGTCATTACCAAATAC
TGGGGGCCGTTTCTTTATGCTTTGTCTTGTGATATATCGACGTATGCCAA
ATTCAATGTGTTGTATCCTTTAAAGCACCGGAGAATGTACAAGCACTAGC
TTCAGGGCAGAATGAAATCACGGTGTCCTGGACACCCCCTACCAGTACGT
ACCCCTCTCATCCTCAGTTCGAGATGTTTACATCAGGATGTAGTGACACA
GCGACCAACAGTAGCTTCTGG Coding sequence (CDS) from alignment at Sc0000022:2596032..2600152+ >transcript:BL97052_cuf2 ID=transcript:BL97052_cuf2|Name=transcript:BL97052_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1011bp|location=Sequence derived from alignment at Sc0000022:2596032..2600152+ (Branchiostoma lanceolatum)
CACACAGTTACCAGTCGATACATCTACTTCCAGGGCAACCCTGTCTCAAC
TCTTGAATCTTATGCTTTTGATGACGTTACCGTCACCAATAATCTGCATC
TAAGTAACATGGACTTTACAGTGATACCACCACGCACGTTTAACCAAGTT
ACAGCCTACGATCTGGTTATGAGTGGAAACACCCAGCTGACTTCGATAGA
GGAAGAAGCCTTCGATGTAACTATCACCCACAGTCTCGATCTATCAAGCA
ACGCCATTAAGGTAGTGAGAGGGAAAATCTTTAGTAACGTATCAGTCGTC
AAGGAGCTACACCTTGAAAACAACTTGATCTACTACATTGACCCTGATGC
ATTCGACGGCGTAACCCTAACCCTGATCAATCTTGACAACAACGCATTGT
TGACATTGGACTCAAATCTGCTCAGCACACAGGGAAGTCTCAAAAACTTG
TCCATGGCAAATAACCGACTTCAACAGATACCAAATGGTTTCTTAGGGTC
CCTTGTGCAGCTTGGAACCCTATCTCTGTCGGGGAATCTGATTGAAATGG
TTGAGTCGACGACCTTCGACAATCTAGCAAGTCTTGAAGAACTTGACCTA
TCCAACAACAGAATCCAGTTCCTAGCAGACGGTGTCTTTGACGGTATCAA
GAACAACGCAAAGATCACGATCGACCTGAGTGGCAACCCTCTAGCCTGCA
GCTGCTCTATGGTTACTATGATGGCGAACTTATGGAATCTTACCACCATT
ACTGGGGGTGAATGCGCTACTCCTGCCCAGGCAGTTGGCGTGTCCTTCGT
CTCCTCACAAAGAAATGCCAGCAATAACTACTTCCTCTCCGTGTGCCCTG
AGACATTCGTATGTGCACCGGAGAATGTACAAGCACTAGCTTCAGGGCAG
AATGAAATCACGGTGTCCTGGACACCCCCTACCAGTACGTACCCCTCTCA
TCCTCAGTTCGAGATGTTTACATCAGGATGTAGTGACACAGCGACCAACA
GTAGCTTCTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000022 | genome | Sc0000022:2596032..2600152 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97052_cuf2 |
| Biotype | protein_coding |
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