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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97053_cuf3 >transcript:BL97053_cuf3-protein ID=transcript:BL97053_cuf3-protein|Name=transcript:BL97053_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=384bp
VVFDGADDVRAGTDYVCTVVLNNNGSYSAVRWPEAVTTLEDLVSVNVTTS
NVTDDLDLPITYYDFSVNHPDFDGTRQGDLGEPIYVNSPFGAFLALSDKP
ATDSISQWFASVPNVNYVREATLTLEKQNETDTYRYYSDSFFPMDGLGYR
SEQQRDCSNVLHNFGFTLAIRVAITYTGNEIVTVGGGDELWLFVDKQKVV
DLRREKGDGSTNTACRKISLLPAMGEGGGSIVPVSGNVTGGECVTGGSVS
NETVALDLTVGETYHFVLFVAEREQCVSSFFLEISGTTFSPQVIDSVAND
GGSRRRRSAGVNGYPLDYQTTIREDLHVNGTVQIIVVTDIFSTGPSYNVS
ILQGNEARHFTIKEDTPDNRLAAATPSPAPLPWM Run BLAST on NCBI mRNA from alignment at Sc0000022:2600863..2604024+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97053_cuf3 ID=transcript:BL97053_cuf3|Name=transcript:BL97053_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=3162bp|location=Sequence derived from alignment at Sc0000022:2600863..2604024+ (Branchiostoma lanceolatum)
GTCGTGTTCGATGGTGCTGACGATGTCAGGGCCGGTACAGACTACGTGTG
CACGGTGGTTCTGAACAACAACGGGAGCTACAGTGCAGTTAGGTGGCCAG
AGGCAGTCACGACTCTAGAGGACCTAGGTACCAGTTCCTAGAATATGTTT
TCAAGTTTGTTTAAAGAATCACTGCAATACATCATCTCTCCGTTAGTATA
ATTGTTCTTCATCAGGCCCTTTTTACTAACTGAATTTTGCTTATTAAAGT
AAAGTAAGACAGAGCAGTCCATAGAAAATTATATTAACAAAATAAATTAG
CATTAATCCACCAATTACTTTCTATGCAAAAAACTGATATGGTTATGTTA
CGTTCGTTCATCATCATCATCATCTACTAGTTCGTAGTCTGCATAACGCA
TAATTATGTTTACTTTACTATTGAGTTTTTAAACAAGGGCTCTGAGAAAG
GGTACTTCAACGGCACACGGTGATTATGCTTTTCCCATCCTCAGTCTCCG
TGAATGTAACAACGTCAAATGTAACGGACGACCTTGACCTGCCCATCACG
TACTACGACTTCAGCGTGAACCACCCAGACTTTGATGGCACCAGGCAAGG
AGACTTGGGAGAACCAATTTACGTCAACAGTCCATTTGGGGCATTTCTGG
CCCTCTCGGGTGTGTAAGATCAATATTTGGGATTGTCTATATAAAAAGTG
CCTTAGCCTTATTTCTAAATCACTTGTATGGCTGATGTATTCTTATGCAT
TTCTGTATTCAATTTCACTGAATCTTCATCTTCCAGAACTCATCCATTAC
CCACTAGTAACTTTCATTAGAAGCCATTAGGGAGACACTTTTAATCCTAT
TGTCACATCCAACGTCCTTTGAAATTACGCATGATCTACAGTTGCTCGGT
CTTGTCATGAACATTAACTTTTTCCTCCTGTGTTTTAACAGACAAGCCCG
CCACAGACTCCATTTCTCAATGGTTCGCATCTGTCCCTAACGTGAACTAC
GTTCGTGAAGCGACACTGACACTGGAGAAGCAGAATGAAACAGATACCTA
CAGGTACACTAGTTTCTTTTATGTATCATTCGTAAGGTAAGTAACATGCA
TACCTGAATACCTAATCTTTTAGAGAACTATAGTCCTTCGGTTTATGATG
CAGTTGTTGTCATCCTTCCTATCCCTAGGTATTACAGCGACAGCTTCTTT
CCTATGGACGGGCTGGGATACAGGTCGGAGCAACAGAGAGACTGCAGCAA
TGTACTCCACAACTTCGGGTTAGTGTCTCCATTATCTCATATCAACAGTG
CATCTATTATCTTAATAATGATGCAGTTGTATTACTAGCAGCAGTCACTG
GTTATAATGAATATCACATACTTGACAGCAATATATTAGTCATTAGATGT
GTGCAAGTAGCAGTAGCATTTTAACATTAGTATTTACAGACAGTCCATTC
GAAAGCAAAATGTAACGCAAAAATTAAAACGAAGCGCATCGTGGCTAATT
TTTCAATCAGCAAAGCATTTTTTCTAGAGGTCAGAAAAGTTTGGTCTGTG
AATTCATATGCCTCTCTCTTTGTTGTATAGATTTACTCTGGCTATTCGTG
TCGCCATCACCTATACTGGGAACGAGATCGTCACCGTTGGTGGTGGGGAC
GAGCTCTGGTTGTTTGTTGACAAACAGAAAGTTGTTGACCTACGGCGAGA
GAAGGGCGACGGTTCCACAAACACTGCATGTAGGAAAATCAGTCTACTTC
CAGCGATGGGAGAAGGTAATTTGGTTCCAAATCTGCGGAAACGCATTTCT
AATCTCGTGTCCTTAGACACAAAATTGTGAGTTAAATTGCTGTTGTTGTT
ATTTTTGTTGTAATTTTTTTGAAAATGTTTACGGTGTGTTTCATATCGCA
GGTGGAGGTAGTATTGTACCTGTTTCCGGAAATGTCACGGGTGGAGAATG
TGTCACAGGAGGAAGCGTTTCGAATGAGACTGTGGCACTGGACTTAACGG
TAAGACCAAAACAAAGGTTGCAATTCCTCTTTTATAATGTATCAACAAAT
AACCGAGATACACAAGTGGGGAAAGACGTAAAATAGATTTCGTACTATAG
TATAAAAGACCTGTTAAACACGTAGACACCCATTGTATTCTTTGTCTGAC
TAGACCAGCTCTTCCACTGGTCAGACCCCTGAATATCGGACAGGTCCGTG
GTCTGCTGGTTTCCATTGTTTCCATGGAAAGTGCGAGTTTGTGTAACACA
AACGTAACTATGCACTCTTATGCAAACAGTCACTTAAGCAAAGCGGCAGA
TTACCTTGATGTCTAACTTTCATCGACGCAATGTACCCTTCTTTTCTATT
TTCGTATCAACAAGGTCATACGTAATTTCCAAACCTTCTCTTTTCGTCTT
CCTTCCCTAGGTTGGAGAAACTTACCACTTTGTTCTGTTCGTTGCCGAGC
GAGAGCAATGCGTCTCCTCCTTCTTCCTGGAGATCTCTGGGACGACATTC
TCCCCACAAGTGATTGACAGCGTTGCAAACGATGGTGGGAGCAGGAGGAG
AAGATCTGCTGGCGTCAACGGATACCCTCTGGACTACCAGACGACCATCA
GAGAGGACCTACATGTTAACGGCACCGTGCAGATAATAGTCGTCACCGAC
ATTTTTTCTACAGGGCCATCGTACAATGTCTCCATTCTGCAAGGTGAGTA
CATGTATAGCGACCATTTGGTATTGTTATATAAGTAGTAGAGGCATAGCT
AGTATTATAGATACTACGTTGGTACATGGTATGATGCCTCCTTCACGTCT
TGTCAACCAAAACTGTAGCAGCATTTCTTTGCATTGTTCAGTTTGTACCT
ATGGAGTTTGGTTGAACCTTCTTGATTTACCTTTTTTCTATAACGTTACA
TAATCCTTTATATTCTATTAACTCTTTGATTTTAGAATGAAATTTCACAG
TGTCTAGAGGTCTAAATACGTTTAAGCTATTCATCGTAGATTTCATCTAA
GACAAACTGTATCTTGTTCGACACATATCTCCATCATGTACACGGTGCTG
ATAAAATTTGTTATCTTCAGGAAATGAAGCTCGCCATTTCACGATCAAGG
AAGACACACCTGATAACCGTCTGGCGGCTGCCACACCCTCCCCCGCGCCT
CTGCCGTGGATG Coding sequence (CDS) from alignment at Sc0000022:2600863..2604024+ >transcript:BL97053_cuf3 ID=transcript:BL97053_cuf3|Name=transcript:BL97053_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1152bp|location=Sequence derived from alignment at Sc0000022:2600863..2604024+ (Branchiostoma lanceolatum)
GTCGTGTTCGATGGTGCTGACGATGTCAGGGCCGGTACAGACTACGTGTG
CACGGTGGTTCTGAACAACAACGGGAGCTACAGTGCAGTTAGGTGGCCAG
AGGCAGTCACGACTCTAGAGGACCTAGTCTCCGTGAATGTAACAACGTCA
AATGTAACGGACGACCTTGACCTGCCCATCACGTACTACGACTTCAGCGT
GAACCACCCAGACTTTGATGGCACCAGGCAAGGAGACTTGGGAGAACCAA
TTTACGTCAACAGTCCATTTGGGGCATTTCTGGCCCTCTCGGACAAGCCC
GCCACAGACTCCATTTCTCAATGGTTCGCATCTGTCCCTAACGTGAACTA
CGTTCGTGAAGCGACACTGACACTGGAGAAGCAGAATGAAACAGATACCT
ACAGGTATTACAGCGACAGCTTCTTTCCTATGGACGGGCTGGGATACAGG
TCGGAGCAACAGAGAGACTGCAGCAATGTACTCCACAACTTCGGATTTAC
TCTGGCTATTCGTGTCGCCATCACCTATACTGGGAACGAGATCGTCACCG
TTGGTGGTGGGGACGAGCTCTGGTTGTTTGTTGACAAACAGAAAGTTGTT
GACCTACGGCGAGAGAAGGGCGACGGTTCCACAAACACTGCATGTAGGAA
AATCAGTCTACTTCCAGCGATGGGAGAAGGTGGAGGTAGTATTGTACCTG
TTTCCGGAAATGTCACGGGTGGAGAATGTGTCACAGGAGGAAGCGTTTCG
AATGAGACTGTGGCACTGGACTTAACGGTTGGAGAAACTTACCACTTTGT
TCTGTTCGTTGCCGAGCGAGAGCAATGCGTCTCCTCCTTCTTCCTGGAGA
TCTCTGGGACGACATTCTCCCCACAAGTGATTGACAGCGTTGCAAACGAT
GGTGGGAGCAGGAGGAGAAGATCTGCTGGCGTCAACGGATACCCTCTGGA
CTACCAGACGACCATCAGAGAGGACCTACATGTTAACGGCACCGTGCAGA
TAATAGTCGTCACCGACATTTTTTCTACAGGGCCATCGTACAATGTCTCC
ATTCTGCAAGGAAATGAAGCTCGCCATTTCACGATCAAGGAAGACACACC
TGATAACCGTCTGGCGGCTGCCACACCCTCCCCCGCGCCTCTGCCGTGGA
TG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000022 | genome | Sc0000022:2600863..2604024 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97053_cuf3 |
| Biotype | protein_coding |
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