|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97056_cuf6 >transcript:BL97056_cuf6-protein ID=transcript:BL97056_cuf6-protein|Name=transcript:BL97056_cuf6|organism=Branchiostoma lanceolatum|type=polypeptide|length=313bp
PCHPFTWSRGDCKGCVGCNPGECPCLDSAPCFEGVTCQNIDSATYRCGPC
PAGLSGDGVTCVDIDECSLASPCFTNATCENSDPGYQCGKCPVGYTGESS
HGYGLEHAQNSPQVCLDIDECEVDNGGCHVNAECINTPGSYSCGNCVEGY
ISDIYLGCIPEDLCQLGRHNCSSNATCLSLGNGKFRCGCETGQGGDGYRC
SRDTDQDGWPDEHLSCLTRNCAQDNCPQDPNSGQEDNDGDTMGDVCDPDD
DNDGRMDIEDNCILVANWDQVDTDGDGYGDVCDTCPGLANQDQTDTDGDG
VGDACDNDDDGDG Run BLAST on NCBI mRNA from alignment at Sc0000022:2614919..2618125+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97056_cuf6 ID=transcript:BL97056_cuf6|Name=transcript:BL97056_cuf6|organism=Branchiostoma lanceolatum|type=mRNA|length=3207bp|location=Sequence derived from alignment at Sc0000022:2614919..2618125+ (Branchiostoma lanceolatum)
TCCCTGCCATCCCTTCACCTGGTCCCGGGGAGACTGTAAGGGGTGTGTGG
GCTGTAACCCGGGCGAATGTGAGTTATATTCATTTTACCACAAGTCACTT
CCATATTATTGTAGTCATAGTTTTTAGAATAGACTAGTTTAGTACTCATT
ATATTGATTGCCTTGTCACTGTTGCCATACATTGTACCATGTACGATTGT
CGAGCAATAAAGTCCATTCAATCATTATTTGAAGAACATCAGGGAACGTC
TCTATGCGTGGACTAGCATGTTGCTCTTTTTCTGTTGCAATTTGTATATG
TATATCCTCTATGTTGATGCTTTGTCAATATAGGCCAGGTAGTTACTGAG
TTGAATAGATGGATTGCTTGGCATAATCGTCAAGGAAGTGCATCCTTCAA
GGAAGTGCATCGAGAGTATGGTTTACCCATTTCACCACACTGTCGTTCAC
ACACCCAACACTCGTACAAACACGTGCTGAAACAACAGACATTATCTTAT
GCTTAATTGAACTTGACTAGATAGCTGTGTAAAATACTAATCACCGCTTA
AAATCTTGTGCTCGGTCTGCAGGTCCTTGCTTGGATAGTGCACCTTGCTT
TGAAGGAGTGACCTGCCAGAACATCGACAGCGCCACCTATCGATGTGGCC
CGTGTCCTGCAGGTCTCAGCGGGGACGGCGTCACCTGTGTGGATATTGAT
GAGGTGAGTAATTTCTTCTTATTTCTGGATGATTTATGAATATGTATGAT
AAGTTATTGTGCTGAAATACTTTTTTATGATCTAAGCTTATTTCCTCAAT
TTACATTTTGTGCCTTTACATTTTGTGCTTCCCTGAAGTCAGTTTCTCAA
TAAAACAAAACGATCTATAATTACCATTATAATTGTGAAACGAGTAATAT
TTCTAATTTTATGAGCATAGGCATGCCGCATCTATTGGTGAATGGATATT
CTTACTATAGATACGTTTGATGGACAAAATATTTTAACACAGCTTTTGAC
ATTATCGTTTCCACTGCAGTGCTCCTTGGCGAGCCCGTGCTTCACCAATG
CCACCTGTGAAAACTCTGACCCAGGGTACCAGTGTGGGAAATGCCCAGTA
GGCTACACGGGAGAAAGTTCCCATGGATACGGACTGGAGCATGCGCAGAA
CAGCCCACAGGTATTCTTTTTGTCTCATTCATTTCGACAATACCAATGGA
TTCACAATGTAGAAGCCACACAAGTTTAAAAACTAGTGAAGATCAAGGTT
AATCAAGATCTTCACATACATCGTTGACGTGTCATACACTGTACTTGTGA
AATACTTACGCCTTGTGTCGACTTAAAACGTATGCCAAAAACAATGCATA
TTTATCTATATACAGGTTTGCCTAGACATTGACGAATGTGAAGTTGACAA
CGGCGGGTGCCACGTGAACGCAGAGTGTATCAACACACCGGTAAGTGACA
AAACACCAACGAGGTGCTCCTAGCCTTAGTAGGAATCTACTTGGAGAAAA
AGGGGTCTTCACAAAGCTTCCATCAATTAACTGCATCAACCATTTGTCAT
CACATAGTGTTTTCTCACGTGCTTCCCAAACTGACAATGCAATTCTGTTC
TCTCGAGACCACATAATCTTACCATCTTACCATCCTCTCTTCACAGGGAA
GTTACAGCTGTGGCAACTGTGTGGAAGGTTACATCAGCGACATCTACCTG
GGCTGCATCCCGGAAGACTTGTGTCAGCTCGGCAGGCACAACTGTAGCAG
CAACGCCACCTGTCTGTCTCTGGGGAACGGCAAGTTCAGATGTGGAGTGA
GCATATTAGCTTATATATTATATCTTTTTGTAAGTCTATGCATGGGAGTA
GAAATCACAAGACTACCAAACTGAGGTTTAAAAAGTGAGCATTTCGTCTT
ATTGTGCCACAGCGCTGTACGCCAAAGCCATTGAAACTTCACATAGATCG
TATCACCTTGGGTCTCAATTGTAGAAGAAAAAGGACACAATTAAAGTGAT
CAGGCTAAAGAAAAAAAGATACCTTAATCATTGAGACATGCAAAGTGCCA
CCTGAAATGACTGATAGACTACGTTTATCTTATAGAGGCTGATCTTTAGT
ACGTTTTCGTTGCAGTGCGAGACAGGACAAGGTGGAGACGGCTACCGCTG
CAGCAGGGACACTGACCAGGACGGCTGGCCGGACGAACATCTGTCATGCC
TCACTAGGAACTGCGCACAGGTTGTACTCATAAACGTAACAACTCTGTGA
CAAAGCTTCCATCATTTTTTTACTCTATCAAATGCCTTGCTTATTCATTG
ATCAGTGTCCAGTTCAGAAGTACCCGATAAACTGGTAAAGGAGATACTTT
AGCATTAAGCAATGCACGTGCATACATATTCGAAGCTGTACTAATTTTTA
CTGCCTGGTCTAAAAAGCTTATGACCAAACTACAGTGACTCTGTTGATGA
AGGTTAGACAATTAGGTTATATCATACGCAAGATAACAGCTAAAGCAGAT
GGATAGATTTAGGAAACGTCCAGACGGCCAGTATCCACTACCTTTTGTCA
GTAACACTAACTGCGGAAAAGTAGGCCAGTCACTGAAGAAAAGTAGCGGG
TGCTAGCTGAAACGTCTGACCGTTTCCTAAATCTATTCAGTTGTTGGAGT
TGTTTGTCACCTTGCCTACTTCAATTTTTTTCAAAAAAAGGTTCTAACCC
AAGCTTGTTATATTTCTCTCAGGACAATTGCCCCCAGGACCCAAACAGCG
GACAGGAGGACAACGATGGGGACACCATGGGTGACGTTTGTGATCCTGAT
GACGACAATGACGGGCGGATGGATATAGAGGTAAATAAGGAGGTCAAGTG
TCGAGCAGGAAATGACCTCAACATTTATAGTCTTGGAAGAGTACAGTACA
GAGTCACAGGCTTCTAAAATACTGGTTTTATCACGTTCTGCTTAATATGT
TTGAGTAACTTGAGTGGCACAGAAACTCGAGAAAACTAATCTAGTAAAAA
AAATCAAATAAAGACTTTAGGATTAATTTTGTGGGTCATTTTCAGGACAA
CTGCATCCTTGTCGCCAACTGGGACCAAGTAGATACGGACGGAGATGGGT
ACGGTGACGTATGTGACACGTGTCCCGGCTTGGCCAATCAGGATCAGACT
GACACCGATGGAGATGGTGTTGGGGACGCCTGTGACAATGATGACGATGG
TGACGGT Coding sequence (CDS) from alignment at Sc0000022:2614919..2618125+ >transcript:BL97056_cuf6 ID=transcript:BL97056_cuf6|Name=transcript:BL97056_cuf6|organism=Branchiostoma lanceolatum|type=CDS|length=939bp|location=Sequence derived from alignment at Sc0000022:2614919..2618125+ (Branchiostoma lanceolatum)
CCCTGCCATCCCTTCACCTGGTCCCGGGGAGACTGTAAGGGGTGTGTGGG
CTGTAACCCGGGCGAATGTCCTTGCTTGGATAGTGCACCTTGCTTTGAAG
GAGTGACCTGCCAGAACATCGACAGCGCCACCTATCGATGTGGCCCGTGT
CCTGCAGGTCTCAGCGGGGACGGCGTCACCTGTGTGGATATTGATGAGTG
CTCCTTGGCGAGCCCGTGCTTCACCAATGCCACCTGTGAAAACTCTGACC
CAGGGTACCAGTGTGGGAAATGCCCAGTAGGCTACACGGGAGAAAGTTCC
CATGGATACGGACTGGAGCATGCGCAGAACAGCCCACAGGTTTGCCTAGA
CATTGACGAATGTGAAGTTGACAACGGCGGGTGCCACGTGAACGCAGAGT
GTATCAACACACCGGGAAGTTACAGCTGTGGCAACTGTGTGGAAGGTTAC
ATCAGCGACATCTACCTGGGCTGCATCCCGGAAGACTTGTGTCAGCTCGG
CAGGCACAACTGTAGCAGCAACGCCACCTGTCTGTCTCTGGGGAACGGCA
AGTTCAGATGTGGATGCGAGACAGGACAAGGTGGAGACGGCTACCGCTGC
AGCAGGGACACTGACCAGGACGGCTGGCCGGACGAACATCTGTCATGCCT
CACTAGGAACTGCGCACAGGACAATTGCCCCCAGGACCCAAACAGCGGAC
AGGAGGACAACGATGGGGACACCATGGGTGACGTTTGTGATCCTGATGAC
GACAATGACGGGCGGATGGATATAGAGGACAACTGCATCCTTGTCGCCAA
CTGGGACCAAGTAGATACGGACGGAGATGGGTACGGTGACGTATGTGACA
CGTGTCCCGGCTTGGCCAATCAGGATCAGACTGACACCGATGGAGATGGT
GTTGGGGACGCCTGTGACAATGATGACGATGGTGACGGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000022 | genome | Sc0000022:2614919..2618125 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97056_cuf6 |
| Biotype | protein_coding |
|
