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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97077_cuf4 >transcript:BL97077_cuf4-protein ID=transcript:BL97077_cuf4-protein|Name=transcript:BL97077_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=299bp
MCPDAPTVQSQVTDDSCGLMWTSPTQTRGTLNGHIVTRTVIPRHQYPDDS
NAEVTTETFELGVHQWSALKQNLSANSVIHFTVRALTCGEGGKSEELTCE
VTRLEPPAAILLSTGPPVIPTARSFHMDLPDVSERNGPISCYQVIVVKMK
KDETLEGLGRRVGAPDVILTDEAPQEGQTEPYVALGLSGEQYKQIVSRGV
DIGTGEACEHECCRRTEVTLKGGNAKDPGNKELEPATMYTAVIRVYVDTS
TSGGRRKRDTQRAYSSSPFIEPVVTQETDVVTTAVIPIAVGAAVGVLLV Run BLAST on NCBI mRNA from alignment at Sc0000001:7641184..7644577+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97077_cuf4 ID=transcript:BL97077_cuf4|Name=transcript:BL97077_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=3394bp|location=Sequence derived from alignment at Sc0000001:7641184..7644577+ (Branchiostoma lanceolatum)
GCCAATGGAGCTGTCCGTGTCTCTGGTTTGTTACCTGGAGTTACCTACCA
GTTGCAAGTCAGAGTACGAAATGCGTTGGGATGGAGCAGGCTTGGGTATG
ACTATGGAACTACAGACGAAATACGTGAGTTCAGTTTTGTTTTTGCTTCT
CAATCTGACACCTGTACAAGAAGCAATTTTAGGATATGCCTATGGGCGTG
AATTGTATAATAGCAATAAAGGCTTTAACAATCTTGACATAAACTGACTT
TTCTGTGTTATAACCAGCATGAAATATGACCAAATGATGTAATATGCACG
GAACACAGCAGAACCACCTGTCAGCTTTAAATGTACTTCCGCTATAACCC
AGATTATCGTTAAACTGTGATCTTCACCAACAGCACCCGGTCCTCCACAT
AGTTTACAAGTCACACTGATGTCTCACAACACCGTACAACTGTCCTGGCA
ACCGCCGGTGAGACCAAACGGAGTCATCCGCAGCTACACAGTCCAGTATG
GGGAATCCGTGACGTGCGAAGCACCAGAGTTGTCCCAAGAAATGACAACA
GTTGACGCCAGCACCACTGCCGTTATTGGAGACCTGGCTCCGTACACAAA
CTACACATTCTGGGTGCGCGGTGCGACAAGTGCAGGAGAAGGAGACTCTA
GCGACTGTAACAGCACAAGGACCCTGGAATACTGTGAGTTATCAACTATG
GAATTTAGATTACTGTATTATGAATGTATTAGTGCCATTTTGCGTATTAA
TCTATGCTTGACGCCGTTATGTTCTGATCAACCTCTGTAGATCCGACAGC
TCCAATGATCCTGAACGTTGAAGACGAACACGACTGTAACTGTGATGAGT
CCAACGTAGCTCTACAAGTGGCGCTGAAGATACAGTTCCGCCGGCCGGAT
AACGTATACGGTCAGCTGCAGGCGTACCAAGTTAGCATGTACAACAGCTC
TGAAGAGGAGCCGTTTTATCGGGAGAACATGACGTCAGGACTGCAGCAGG
AGAACCTGACAGTCATTGTCAGTTCTGAACAATTGCAGCCTGCACAGAAC
TACTCTGTCACTGTGAGTGCAACTACAAGTAACGTTACATGTACAATATC
TATATCCTGGTGTCATCACGTTCTGATTTCAGTAAAATGAGAATGTAGCG
ATACATGCATGCATGTTGTGGCGATAGTTTCATAATGTCGAAGCTTACAT
TCGGGTAATGATAAAATTTGAGCTGCTCTCGAATGTAAAACCCAGGGAAT
GTATTATCGGTTCATCGATGCATGTTCCATTCTAACTCAGGTTTCATATT
TACTTATATCAGGTGTCGGCCATCAACACAGTTTACCGTGGAATCGAGAG
TCATCCACGTGTGGCCCAAACAAGTGACGGATGTACGTATGAGATTTTTC
TTCAGGATCAGAAGAAAGTAAACGAAACTAGATGTAGTCATAAAAGTATA
CATCGTGCAACAACAAAAGAGTATTGTGCGCACCTCGTTTTTTTTTTTAC
ATGATTGTACCATTTTGCTTGACTCTTGAACATCAACCATCCTTTGTGCA
CTATAGGTCCCGATGCTCCAACTGTACAAAGCCAAGTCACCGATGACAGC
TGTGGACTCATGTGGACATCACCTACACAGACCCGCGGGACACTGAACGG
ACATATTGTGAGTATAATTGTATTTAAAAATCAAATTTATTAATGCTTTC
TGTTTTTGGTATTAGTAAAAGTAAAGGAAAGACGTGATGGGTTGTCAATA
ATGTAATACATGAATATCTTCTACTCAGGTCACACGAACAGTGATACCCC
GTCACCAGTATCCAGATGACTCAAACGCGGAGGTAACAACAGAAACGTTC
GAACTGGGTGTCCATCAGTGGTCGGCGCTAAAGCAGAACCTGTCCGCCAA
CTCAGTCATACACTTCACGGTACGGGCACTCACGTGCGGAGAGGGTGGAA
AGAGCGAGGAGTTGACCTGTGAAGTTACAAGACTAGGTGAGTGCTTTTTA
AAGATAATTTATGGCCCAACAAAGGAATGCTGGTGTCTGCATTAACACCT
TTTATAAATTACGATTGCTGTAGGTTTGCAATCCATTCGAACAAGTTTAT
ATGTTGTTACAGAACCGCCTGCAGCCATACTGCTCTCTACCGGTCCTCCC
GTGATTCCTACTGCAAGGTCGTTTCACATGGACCTCCCGGACGTGAGTGA
GAGAAATGGGCCCATAAGGTGAATTTCTCAAACATGTTTGTGTTATCATC
ACTTTCGTAGAGTGATGCAGCTTTGAGGGAAATCAGATGCATTGTGTGAT
TGTGTTGAATCACTTGTAATTAGTTATGTGAATTTTCCGATTCATCTTCA
TTAGCTGCTACCAAGTGATTGTCGTCAAGATGAAGAAAGACGAGACCCTT
GAAGGCCTGGGAAGAAGAGTTGGGGCACCAGACGTTATACTGACAGATGA
AGCACCACAAGAAGGACAGACGGAGCCTTACGTAGCTCTTGGTCTTTCAG
GGTAGGTTTCTATAAGTTCCATTGAATTTCCACTTTCATTATGGTTTGGC
ACACACTGTCAGAAAGTAGGATATACTGTATTTTTTAGGATATTTGAACG
TATTCAAACAGTGAACGGTCACTCGCAGCCTGTTGTGATTTGCATAAGAA
GTGTCAAAATAGGTATTCATGGCATATCGATGTACCATGATATGCGATAC
CACAATCTTTACAGATTGAAAGGTTTTTTTCTTTGATCAGGGAGCAGTAC
AAACAGATAGTCTCCCGAGGAGTGGACATTGGGACGGGGGAGGCGTGTGA
ACATGAGTGCTGCCGACGGACTGAAGTTACACTGAAAGGCGGCAATGCAA
AGGATCCTGGAAACAAAGAGTTGGAGCCGGCAACGATGTACACAGCAGTG
ATCAGAGTCTATGTGGACACTTCCACATCCGGTGGGAGGCGGAAGAGGGA
CACCCAAAGGGTATGGTACAACATTCATTTTGCCATAAATTTTGCATAAT
ATTGATTAACATAGTCATTCAGCATCTGCATTAGTCGGAATTTCAAAAGT
TGAAAAGGTTCATATCGACCTCATTGTCTGTAAAGCTAAACTCATATTAC
TGTGTAAACCAGCTGAACTTTTTTGACCCAAACCATTTTCTTAATTTCAG
GCGTACTCATCTAGTCCCTTTATAGAACCTGTAGTCACACAAGGTAAGTT
TTACATCTGGCTGATTATTGTGTTATTGTATGTTATACGTAATGTTATAT
GAACTCAACTCATCTTTCAAAGAGTATCTAAGTTTTAGTATGCTAGCGTG
AATTACAAATTAAAATGTTATTCTAGAAACAGATGTGGTGACTACAGCGG
TGATTCCTATAGCTGTTGGAGCTGCCGTCGGCGTCCTGTTGGTC Coding sequence (CDS) from alignment at Sc0000001:7641184..7644577+ >transcript:BL97077_cuf4 ID=transcript:BL97077_cuf4|Name=transcript:BL97077_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=897bp|location=Sequence derived from alignment at Sc0000001:7641184..7644577+ (Branchiostoma lanceolatum)
ATGTGTCCCGATGCTCCAACTGTACAAAGCCAAGTCACCGATGACAGCTG
TGGACTCATGTGGACATCACCTACACAGACCCGCGGGACACTGAACGGAC
ATATTGTCACACGAACAGTGATACCCCGTCACCAGTATCCAGATGACTCA
AACGCGGAGGTAACAACAGAAACGTTCGAACTGGGTGTCCATCAGTGGTC
GGCGCTAAAGCAGAACCTGTCCGCCAACTCAGTCATACACTTCACGGTAC
GGGCACTCACGTGCGGAGAGGGTGGAAAGAGCGAGGAGTTGACCTGTGAA
GTTACAAGACTAGAACCGCCTGCAGCCATACTGCTCTCTACCGGTCCTCC
CGTGATTCCTACTGCAAGGTCGTTTCACATGGACCTCCCGGACGTGAGTG
AGAGAAATGGGCCCATAAGCTGCTACCAAGTGATTGTCGTCAAGATGAAG
AAAGACGAGACCCTTGAAGGCCTGGGAAGAAGAGTTGGGGCACCAGACGT
TATACTGACAGATGAAGCACCACAAGAAGGACAGACGGAGCCTTACGTAG
CTCTTGGTCTTTCAGGGGAGCAGTACAAACAGATAGTCTCCCGAGGAGTG
GACATTGGGACGGGGGAGGCGTGTGAACATGAGTGCTGCCGACGGACTGA
AGTTACACTGAAAGGCGGCAATGCAAAGGATCCTGGAAACAAAGAGTTGG
AGCCGGCAACGATGTACACAGCAGTGATCAGAGTCTATGTGGACACTTCC
ACATCCGGTGGGAGGCGGAAGAGGGACACCCAAAGGGCGTACTCATCTAG
TCCCTTTATAGAACCTGTAGTCACACAAGAAACAGATGTGGTGACTACAG
CGGTGATTCCTATAGCTGTTGGAGCTGCCGTCGGCGTCCTGTTGGTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:7641184..7644577 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97077_cuf4 |
| Biotype | protein_coding |
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