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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97082_cuf3 >transcript:BL97082_cuf3-protein ID=transcript:BL97082_cuf3-protein|Name=transcript:BL97082_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=467bp
CLQLYFTEPLTSFVISATQQAHVESSLSSDDQHGIYFTTNHEISLAVAQV
TGDIETVNWALDGITTTPSLDLTEGVYTITATAVNEFSEISTNLTLRVVE
CIHEVRVFHVGTDGSTPGGFSTPIGYAACQYPARFLVLVRQVGYNATFVA
SVNGGDHFEIPTPVDSNQAGNLMSYQGVIPYNLSDYHLATFTLTFQYQGQ
YQVVVNGTNFVSEAVANVSVTAQWPVTSVLVTDNSPAQAPDPVVFTVWLM
DSTPPTDLFFDASYGDGFDDVGFYVGDQYSSMQPSFDIMYLYLPGSYSFF
IRVYNQVSEAYGSIYATQDYQPYGLNITSFSAFSGIYNGELLYEGVNRTG
QGPGENIFPGPPHLMPVNFEYEVSHGTEDDVHTSWWFIGDEAVGQELKLS
ITFQEVGTYAVTAMAFNQMAVMSGEFQVDIYEAITNVYVASNGPVLLGET
VTFVVFATSPGTNSTFL Run BLAST on NCBI mRNA from alignment at Sc0000001:9619104..9621991+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97082_cuf3 ID=transcript:BL97082_cuf3|Name=transcript:BL97082_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=2888bp|location=Sequence derived from alignment at Sc0000001:9619104..9621991+ (Branchiostoma lanceolatum)
ATTGCCTCCAATTGTACTTTACAGAACCCCTGACTTCCTTCGTCATTTCT
GCAACCCAACAAGCACACGTAGAATCATCCCTGTCCTCTGATGACCAACA
TGGGATATACTTCACTACAAACCACGAAATCAGCCTTGCGGTTGCACAGG
TAATAGCAAAATGATCATCATATCTTGTCGCTTCAGTTCTGTACCCATTG
TCTGGTTAGCCTCTTGTAGATCACCGTCCGTACATGTACATGTTGGGCCA
AGTTCGCAGTTCTGTATAATAGCAAAATAATTCGAATAAACGGAATTAAC
TCATGCATGAAATCATGGAATACAATTTTTCCAAAGTCATCCAACATGAT
ATTCCTGTTGTATAACATTTAACTCATACGAAGGCGTTAAATTCACAACA
GGACAGCATGTTTGGACAGCATTGTGTACTTCATGATCTTCTCTATTAAC
CCACTACTTTATACCATAATTTGCAGGTAACAGGAGACATTGAAACTGTC
AACTGGGCACTTGATGGCATCACCACGACTCCTTCCCTCGATCTAACAGA
AGGTGTTTACACCATCACAGCAACTGCAGTTAACGAGTTCTCAGAGATTT
CCACCAACCTGACACTCCGTGTTGTTGAATGTATTCATGAAGTACGCGTT
TTTCACGTTGGAACCGACGGCTCCACTCCGGGAGGTTTTTCCACGCCTAT
AGGCTACGCTGCTTGTCAGTACCCGGCTAGATTCCTTGTCCTGGTCAGAC
AAGTGGGGTATAACGCCACCTTTGTCGCTAGTGTCAACGGCGGTGATCAC
TTCGAAATCCCAACGCCCGTAGACTCCAACCAAGCCGGCAATCTGATGTC
ATACCAGGGCGTCATACCGTACAACCTCTCGGATTACCACCTGGCAACAT
TCACGCTCACGTTTCAGTACCAAGGACAGTACCAAGTTGTAGTCAATGGG
ACAAATTTCGTGTCTGAGGCCGTGGCAAATGTGTCTGTAACGGCACAGTG
GCCGGTAACAAGTGTCCTTGTGACCGACAACAGTCCGGCTCAAGCCCCGG
ACCCCGTCGTCTTCACCGTCTGGCTCATGGACTCAACTCCGCCCACGGAC
TTGTTCTTCGATGCCTCCTATGGCGACGGTTTTGATGGTAGCGTATGAAT
ATTCTTACCTTTACTCAAAATTGCATTTGTGTAATGTTGTAGTTACACTG
ATATCAGACAGTATTGCTGTAACGCACATGGGACAGTGTACATGATAGTA
AAATAAGTTGTTTCTTCTTTCCTTTCCCCCACCTGCTAGACGTCGGTTTT
TACGTTGGAGACCAGTACAGCTCCATGCAGCCAAGTTTCGACATCATGTA
CTTGTACTTGCCTGGATCGTATTCATTTTTCATCCGAGTGTATAACCAGG
TAAGACTTACGAAATTGTGTAGCTCGTTAGTTTGTGTTGTAACATAATAA
ATGAAATATTTTGCACATTATGCCAATACTCCTAGCTTCTCAAATCCCTA
GTTTCTCAAATTTCTATACTCAATATCCGATATGTTCATCAGGTTAGTGA
GGCGTATGGGTCTATTTACGCCACCCAGGACTACCAGCCCTATGGCTTGA
ACATCACATCATTCTCTGCGTTTTCGGGAATCTACAACGGAGAGCTATTG
TACGAAGGTTGGGAAAACTTTCTTCTTGAGTTTTTTTTGTCTGTGTGCAT
CGAGCATTTCATTTTTTTTTGCTTTAATCCTACACAATGTGATGGTGTAA
GACCCGTGTAGATCTAATATGTTTTCATGCAATATTTTGTAGGTGTGAAT
AGGACTGGACAGGGCCCAGGTGAAAACATCTTCCCCGGCCCCCCACATCT
CATGCCCGTGAACTTTGAGTACGAGGTCTCCCATGGAACAGAAGATGACG
TGCACACTAGTTGGTAAATTCACACTACTTTAACACTACTTTAAGCATTA
AGTATAGAGGCAAATTAAAAACGTACAATGACAATTAGGTAATGTCCTTG
GTGCTGAAATGTGGGAGGGAGGTCCCTAATCCTTGCCATGCGGGCGAATG
CCGATTCAGTGAAGAGTGATTGCAATGGGCCGCTCCAACGCAGAGGAATC
ATCGGTAGAGGTGCTCCGAGGTGGTCTGACCAGTTTGGATACGCTCTGAT
ATCGATGTGGAAAATGCTAGTAACGCACAGGGACAAACTATTGAGCTGTA
CGCAATTGTCCATTATTTTTGTTGTTGTTTTACTGGAACTGGTAAATAAA
AAGAACAGCTATGGTCACTGTGTTCTTCAATTTGACATTTCAACGGCTTG
ATGTCTTCCCCTTCAGGTGGTTTATTGGTGATGAAGCTGTTGGACAGGAG
TTGAAGCTGTCCATCACATTTCAGGAAGTTGGGACTTACGCCGTCACCGC
AATGGCCTTTAACCAGATGGCTGTCATGAGCGGTGAATTTCAGGTAAAAG
CAATAATCTTTTTTTCGAAATTTGAATTTAAATCCAAGTGAGATTTCTTT
TAACCTATGGCCTCGCACAGTATGAATGACCCATCAGTTTGGACATATGA
CTCTAGTAAGAGGTCAAAGGTGTCTGAAAGTCTGTACCACCCATCGGCTC
GGGTGAGGTTTGAAAAACGTCGAAGTTGATAGACTCAATTACTTGTTGTC
CATGAGTAAGCAGTAAACTTGTTTAAAATGGCTCCTACGTTGGAACAACT
TTAGCGACGCGTTGATCTACCATTTCCTCGTGCAATTTCGATGTGTATCG
GTGATGGTTGTTAACAGGTGGACATCTACGAAGCCATCACAAATGTGTAC
GTGGCCAGCAATGGCCCGGTCTTACTCGGCGAAACGGTGACCTTTGTTGT
ATTTGCCACCTCTCCTGGAACGAACAGTACCTTTCTAT Coding sequence (CDS) from alignment at Sc0000001:9619104..9621991+ >transcript:BL97082_cuf3 ID=transcript:BL97082_cuf3|Name=transcript:BL97082_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1401bp|location=Sequence derived from alignment at Sc0000001:9619104..9621991+ (Branchiostoma lanceolatum)
TGCCTCCAATTGTACTTTACAGAACCCCTGACTTCCTTCGTCATTTCTGC
AACCCAACAAGCACACGTAGAATCATCCCTGTCCTCTGATGACCAACATG
GGATATACTTCACTACAAACCACGAAATCAGCCTTGCGGTTGCACAGGTA
ACAGGAGACATTGAAACTGTCAACTGGGCACTTGATGGCATCACCACGAC
TCCTTCCCTCGATCTAACAGAAGGTGTTTACACCATCACAGCAACTGCAG
TTAACGAGTTCTCAGAGATTTCCACCAACCTGACACTCCGTGTTGTTGAA
TGTATTCATGAAGTACGCGTTTTTCACGTTGGAACCGACGGCTCCACTCC
GGGAGGTTTTTCCACGCCTATAGGCTACGCTGCTTGTCAGTACCCGGCTA
GATTCCTTGTCCTGGTCAGACAAGTGGGGTATAACGCCACCTTTGTCGCT
AGTGTCAACGGCGGTGATCACTTCGAAATCCCAACGCCCGTAGACTCCAA
CCAAGCCGGCAATCTGATGTCATACCAGGGCGTCATACCGTACAACCTCT
CGGATTACCACCTGGCAACATTCACGCTCACGTTTCAGTACCAAGGACAG
TACCAAGTTGTAGTCAATGGGACAAATTTCGTGTCTGAGGCCGTGGCAAA
TGTGTCTGTAACGGCACAGTGGCCGGTAACAAGTGTCCTTGTGACCGACA
ACAGTCCGGCTCAAGCCCCGGACCCCGTCGTCTTCACCGTCTGGCTCATG
GACTCAACTCCGCCCACGGACTTGTTCTTCGATGCCTCCTATGGCGACGG
TTTTGATGACGTCGGTTTTTACGTTGGAGACCAGTACAGCTCCATGCAGC
CAAGTTTCGACATCATGTACTTGTACTTGCCTGGATCGTATTCATTTTTC
ATCCGAGTGTATAACCAGGTTAGTGAGGCGTATGGGTCTATTTACGCCAC
CCAGGACTACCAGCCCTATGGCTTGAACATCACATCATTCTCTGCGTTTT
CGGGAATCTACAACGGAGAGCTATTGTACGAAGGTGTGAATAGGACTGGA
CAGGGCCCAGGTGAAAACATCTTCCCCGGCCCCCCACATCTCATGCCCGT
GAACTTTGAGTACGAGGTCTCCCATGGAACAGAAGATGACGTGCACACTA
GTTGGTGGTTTATTGGTGATGAAGCTGTTGGACAGGAGTTGAAGCTGTCC
ATCACATTTCAGGAAGTTGGGACTTACGCCGTCACCGCAATGGCCTTTAA
CCAGATGGCTGTCATGAGCGGTGAATTTCAGGTGGACATCTACGAAGCCA
TCACAAATGTGTACGTGGCCAGCAATGGCCCGGTCTTACTCGGCGAAACG
GTGACCTTTGTTGTATTTGCCACCTCTCCTGGAACGAACAGTACCTTTCT
A
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:9619104..9621991 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97082_cuf3 |
| Biotype | protein_coding |
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