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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97085_cuf9 >transcript:BL97085_cuf9-protein ID=transcript:BL97085_cuf9-protein|Name=transcript:BL97085_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=234bp
GFPQSESLCHTQVETMAVKDRDPLAHYQYDVTVVTGFRRNAGTSGNVNIR
LIGDYGESELHTLSDPLTNRKVLQRGSIDSFLITTRDWLGQIKEIAIRID
NVGKSQSWYLSRVMVRDLQTDQRWHFLSNRWLTTDQDRREFEIHLPVTDE
NELRQALPLFVARALFGLRNDHLWFSILTRSPRSSFTRVQRMTCCLITLL
CQMVAAIIFHAISGYSSLGEFRLGWEQLIVGVES Run BLAST on NCBI mRNA from alignment at Sc0000001:9629284..9630903+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97085_cuf9 ID=transcript:BL97085_cuf9|Name=transcript:BL97085_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=1620bp|location=Sequence derived from alignment at Sc0000001:9629284..9630903+ (Branchiostoma lanceolatum)
GGGGTTCCCACAATCAGAGTCTCTCTGCCACACTCAGGTTGAAACAATGG
CGGTAAAAGATCGTGACCCATTGGCTCATTACCAATATGATGTCACGGTT
GTTACCGGATTTAGAAGGAATGCTGGGACCTCAGGCAATGTCAACATCCG
GTTAATTGGAGACTATGGTGAGTAATTTGGCCTTTTTATCATATTCTTTT
GTTGTTGTTGAAGAAAGGCTCTTTCACTTTCAGTTGTTTAAGAACATGTA
TGTTCAAGTTCGACCACTCTTCACTGATTCCTTATTATCATTTTTTGCTT
ATTCAAAACTGCAGGAGAAAGTGAACTTCATACACTATCGGATCCACTGA
CCAATAGGAAGGTCTTACAGCGAGGAAGTATTGACTCCTTCCTCATCACC
ACCCGTGACTGGTTGGGACAAATAAAAGAAATAGCGATACGGATAGACAA
CGTTGGGAAGAGCCAGTCTTGGTATGTGACTGATATCTTAGAAACAGAGC
ATTTCCATAATTCTTCAATTGTTCTGTGAAATCCATGGCAAGTATAAAGG
TTCTTGAGCAGTTATGTCCCTCACTACTAGTCCCGTGTGAAAAGTGCTGA
ACATGAAACACTGATGAATTAAAGACATTCAATTTTAGTAACATCATAGA
AAAGATGTTTTTGTTTTGTAACACTGAACAGGTATTTGAGCCGTGTAATG
GTACGGGACCTGCAGACTGACCAGCGGTGGCACTTTCTCAGTAACAGGTG
GTTAACGACGGATCAGGACAGACGGGAGGTAGTGTGTTGTATATTAGTTA
TTACACCGAAGATTAACGACAAAAACTAAATATGCAGATGGTAACGCTAT
TAAGATATGCAGATGGTAACGCTATGTTTGGTGCATTTGCACGTTCTTGC
CACCATGGGCTAAATACAGTAGTTTCACTTTTACATGAGAGACTGTTATT
ACTTAGTCTTCCTAGTGAACAATGGGAGAAACAAAACAACTAAAGCTATA
TGCCACCACTAAATCTATCGTTAACGTAACAATATGTCATGTTTATAGCA
TCCCATCTCATCAAAAGCTGTGTACTTTTCAGTTTGAGATCCATCTCCCC
GTGACAGATGAGAACGAGCTCCGACAGGCGCTGCCACTGTTCGTGGCTAG
AGCTCTCTTCGGACTACGGAACGATCACCTCTGGTTCTCCATCCTCACAC
GATCACCAAGGAGCAGGTATGACCATTTCATTTGAAACAACTTCCCAGAA
CGTAGGGCCTTATTGCATGTAGAAGCAAATCAATACAATAAGAAAATTTT
AGAACCTCTTTGGAAAGTACCCTGGGAGACCAGACCCAGTGACTCGGTGC
GATCGTTGGGTGATCGCGCCGAGTCACGGGGTTTGGTCTCCCAGGGTATT
TGGAAAGAAGAAAATGTGTCTACTATAAGCTGGGCAGACGTTAACCCTCC
TCTCAATGAATATATTCCAGCTTTACGAGAGTTCAGCGGATGACGTGCTG
TCTCATCACCCTCTTGTGTCAGATGGTCGCCGCCATCATTTTCCACGCAA
TATCTGGATATTCCAGCCTTGGTGAATTTCGGCTGGGATGGGAGCAGCTT
ATCGTTGGCGTGGAGTCGGG Coding sequence (CDS) from alignment at Sc0000001:9629284..9630903+ >transcript:BL97085_cuf9 ID=transcript:BL97085_cuf9|Name=transcript:BL97085_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=702bp|location=Sequence derived from alignment at Sc0000001:9629284..9630903+ (Branchiostoma lanceolatum)
GGGTTCCCACAATCAGAGTCTCTCTGCCACACTCAGGTTGAAACAATGGC
GGTAAAAGATCGTGACCCATTGGCTCATTACCAATATGATGTCACGGTTG
TTACCGGATTTAGAAGGAATGCTGGGACCTCAGGCAATGTCAACATCCGG
TTAATTGGAGACTATGGAGAAAGTGAACTTCATACACTATCGGATCCACT
GACCAATAGGAAGGTCTTACAGCGAGGAAGTATTGACTCCTTCCTCATCA
CCACCCGTGACTGGTTGGGACAAATAAAAGAAATAGCGATACGGATAGAC
AACGTTGGGAAGAGCCAGTCTTGGTATTTGAGCCGTGTAATGGTACGGGA
CCTGCAGACTGACCAGCGGTGGCACTTTCTCAGTAACAGGTGGTTAACGA
CGGATCAGGACAGACGGGAGTTTGAGATCCATCTCCCCGTGACAGATGAG
AACGAGCTCCGACAGGCGCTGCCACTGTTCGTGGCTAGAGCTCTCTTCGG
ACTACGGAACGATCACCTCTGGTTCTCCATCCTCACACGATCACCAAGGA
GCAGCTTTACGAGAGTTCAGCGGATGACGTGCTGTCTCATCACCCTCTTG
TGTCAGATGGTCGCCGCCATCATTTTCCACGCAATATCTGGATATTCCAG
CCTTGGTGAATTTCGGCTGGGATGGGAGCAGCTTATCGTTGGCGTGGAGT
CG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:9629284..9630903 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97085_cuf9 |
| Biotype | protein_coding |
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