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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97094_cuf9 >transcript:BL97094_cuf9-protein ID=transcript:BL97094_cuf9-protein|Name=transcript:BL97094_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=607bp
TEAAEGENSANVTWTVAVATDNADDEVPITVVPTVWPPRLFSIGVVNVTY
SAQDKSGNVAHCTFTITVKDTQPPVIDKCRSPPPFLSKTGMANVSWEEPQ
FSDNSGEPLKMLRSHEPGLFPWGTSIVNYTAVDTAGNSKSCNIIVHVQQH
VCDVPDDPLYGGSDCNTMERGINCTLHCSNSHGFAIQPENFYYCTLEGNW
LPTEHHKPWWPDCSSKKLANDALKHIQMYYESSLWCNNPGLLDSVKESVS
AMVTNRMSGYCGNDIECQLRHVSSRCVQINYGEANWKQVLSESEEPQYSD
VMFHPATNLKMGKRNKRNLISHLRKKRLSSKQTDFAQQTRRHLKRQLRSL
QIKESRRVKRDRGDEETQEIYGKWTRRTSSSEFPTLDSIFSGSYKTSSRE
DVRRDVEKNGKHQESMSEEIEATDDPEDQIGVPSYRRISSVQLGLNDLRS
RIPEAPDWEGTGIYDKNNLVSYQVQVELELTGHATPPPDSTTEEEQQLQK
ELLNILDDVPNHMTTDGAEGALDIDIDGYDLKPLSNAIDAQPSSLFCQPG
AVLRGNFCVNCPQGTYFDVQRGECAACPVGTYQDLEAQLQCDICPRKTST
ATQGSKT Run BLAST on NCBI mRNA from alignment at Sc0000001:7102054..7108017- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97094_cuf9 ID=transcript:BL97094_cuf9|Name=transcript:BL97094_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=5964bp|location=Sequence derived from alignment at Sc0000001:7102054..7108017- (Branchiostoma lanceolatum)
CACGGAGGCAGCTGAGGGGGAGAACAGTGCCAATGTCACCTGGACGGTCG
CTGTTGCCACGGACAACGCAGACGACGAGGTGCCAATCACTGTCGTCCCC
ACAGTCTGGCCACCGCGACTGTTCTCCATAGGAGTGGTGAACGTGACATA
CTCAGCACAGGACAAGTCTGGCAACGTGGCACACTGTACCTTCACCATCA
CTGTCAAAGGTAAAAGGTACAACTAGCTATCTTATGGGCATGATGAAATT
TGATAATGGCAATGATTTCAATCAACATCAGAGTTGAATGATATCTAAAA
ATGATGAAAAATGTTTGTTCACTTTTTGGTAATGTAATTCTGTCAATTGG
TTTTGACATCATCTTTCATATAGTTTGCTTGCTGTACATGTAAATGAGTA
ACAAATAGGGTACAGGGTTTTTTCTAGAAAACACCATACCCCACTTGTTC
GCTCCACTCCCATTGCGAGGGAGTGGAGCGAACAAGTGGGGTATGGTGTT
GAAGTGTGGAGTTTTAGAAAATTTTAAATTAAAATTGAAAAACTCAATAT
CTATGTACTAAGGTGTCTGATTTTTACCTTCATCAGTAAGTCTCATTTTC
CCCCAGACACCCAGCCCCCTGTGATAGACAAGTGTCGGTCTCCGCCACCG
TTCCTGTCCAAGACTGGGATGGCCAATGTGAGCTGGGAGGAGCCTCAGTT
CTCCGATAACTCTGGGGAGCCTTTAAAGATGCTGCGCAGCCACGAGCCAG
GGCTGTTCCCCTGGGGAACTTCCATTGTCAACTACACAGCAGTGGACACT
GCAGGAAACAGCAAGAGCTGTAACATCATTGTCCATGTGCAACGTAAGTT
ACTGTGCTTACTTTACCTTTCTTAGCTTCTAGGCTTGAGTACAGTAGGAG
CATCCGCACTAAATACAGACTGTAGCTTTTAAGAACGGTTGCAGTCAGAT
TTTTTTGTTCTAGGTGTGACAGTTCAGTGTTATATAAGCAGCTGCCTCCG
CGCCGGGTGCCTGCGAAGCTGGTGTGTTAAGCCGAATGGCGGTTATACTG
GCTATATAGATACAGATACAGATATTACAGATACAGAATGCTTTGAAATT
TATTGAATTGTTAGTACAACATTACAGAACCTCTCAATTTTGTGTAGTTT
TATTTTTGGTTTACAAATGTATGCAAGTGAATCAAAAGTAGAATGTGAAG
GAAAAGTTTAACTTTGTATGATATTGTACAAAATACATGGACTTTTGCAA
TGTTTTTCTTGTCAGAAGATTACTGAAATCGATGATGATTTTTAGAATTA
ATCTAGCATTTCTTAAACTACAATGTATACCAATGAATAAAGGTCTCCTC
AAGCCTTCAATTACTGTAAATGCAGAAATGTTCGCGGTGGTTTTATGTTT
TATTTTCTCCAATACTGTAGCAGTTTGTAACTATAGCACTGCCGCGATCT
TAAAACCACCACGAACACTCCATTTTCGCCTTAGCGCGAAATAAAAACCG
CACAAACTTAAATGCACTTACAGTATTTTACAACATCATAACAATGTTTT
CCCCCCATTGTACAGAACATGTATGTGATGTACCAGACGACCCCCTGTAC
GGTGGGAGCGACTGTAACACCATGGAGCGCGGCATCAACTGTACCCTGCA
CTGCTCCAACAGTCACGGGTTCGCCATCCAGCCTGAGAACTTCTACTACT
GCACCCTGGAAGGCAACTGGCTCCCTACAGAACACCACAAGCCTTGGTGG
CCTGACTGCTCAAGTAGGTGAATACAAACCTCACTGTTTTGTACAAAGGA
GAAATTGTAGATCTGTTTGTGGCAGCTTAAAACTAAACTGTAAGAGAAGT
CATATGTATTTTGGCATTAAAAAGATACAAAAAATTGGAAGTTCTGCTGC
AGTACCAAGGTCACATACCAGGGGGCCCAAAATGACCTTGACCTTTGTCT
TTCCAACACCTACCCACATAATTCATCCAGAGGTTCTTGAGCTATGCTGA
CTACAAAAATCCGGAAACACCAACAGACACACACACAAACACACACACAC
AGACACACACACGGACAGACCAACAACTTTATCTCCATTTTTCACGATAA
AAGTCTATTTGTAATTTGTTATGTTAAGCATAATGGAGACATACTTAGTT
GTGTAAAAATATACATTGTACACCTGTACTGATTTCTGAAATGTTGTTCT
CCCTGTAGGTAAAAAGCTGGCCAATGATGCCTTGAAGCACATACAGATGT
ATTATGAGTCCAGTCTGTGGTGCAACAACCCAGGCCTCTTGGACTCTGTG
AAAGAAAGTGTCAGCGCCATGGTGACGAACAGGGTATGTACATAGAGGGG
TCAGCTGGGGAACATTTCTTCCACCCTTTCATCATTCTAAATAAAGTCTT
CCTTGCATTGAAGTTCTATTGAATCCTTCCTTCTTTTGAGGACGTCCTGC
TTGCCCCCTTATTTAAGGAAATTTGCTGACGACTATAGAAATGTATGCTG
GTCATGTCCTTGGTGCTGAAAAACCTTCACTTGTATGTAGTGTTGATATG
CAGTATAAAAGTAGCCCACTTTGAGCATTATTGGGGGAATTTGAATCCTT
TTGATAGTTTGACATATTGGTGGAGCCTTTAGATGGTGTTTTCTTCTGAA
ATATTTCCTTTTACATGCATCATCATTGAAAAAATCATGAACATATGAAT
GACTTGACACCAATTGTTGCTCATAGTAGTTCCCATTCAACAATATACTA
AAATCTTACACATTGTATATAATTTGGAACAAATGTCTTTCTTGATTTTA
TCCTTCTCAGTGAGTCAACTGTATTGCTCATTAATGATCATCCTTATTTA
TAACATTCCCAGATGTCAGGCTACTGTGGAAATGATATTGAGTGTCAGCT
GAGGCACGTGTCATCACGGTGTGTGCAAATTAACTATGGAGAGGCCAACT
GGAAACAGGTCCTGTCAGAGAGTGAAGGTAAAAGGTTTAATTTACACTGC
TGCTTTCTTTCTCTCATGAGGACAATGTTTGAAATCAATCTACTTTGTTA
TCCCAAAATGTTGTTAAAAAGATAAGTAACATGGAAGAAGGCCAAGTGAC
AAACCATGACACTTGTTGAGTGCATCTCAAAAGCTCCTCTAAAAGTAGCA
AATTCTTTTGTTGTGTGTAAGCGGTTGAATATTTCATCAAACCCATGACA
TGTTTTTTAGAGCCCCAGTACTCTGATGTGATGTTCCACCCTGCAACAAA
TCTAAAGATGGGCAAGAGAAACAAAAGAAACTTGATAAGTCACCTCAGGA
AAAAACGCCTGAGCAGCAAACAAACTGACTTTGCACAGCAAACAAGAAGA
CACCTGAAGCGCCAACTTAGGAGTTTACAGATTAAGGAATCCAGAAGAGT
TAAAAGAGACCGTGGGGATGAAGAGACCCAAGAAATCTATGGAAAGTGGA
CCAGGAGGACTTCTTCTAGTGAGTTTCCCACATTAGACAGCATATTCAGT
GGTTCCTACAAAACCTCTAGCAGAGAGGATGTCAGAAGGGATGTGGAGAA
AAATGGCAAACATCAAGAATCCATGTCTGAAGAGATTGAGGCAACTGATG
ATCCTGAGGACCAGATAGGAGTGCCTTCGTATAGGTGGGTGTGATGCATT
TTGTGTCATGATGACATATTTGACTGCATGCCCACAAGTCAAACATGTAA
CAGTATTTCAGATAGTTACATGTATAGAATCGGTAAATGGTTCTCTTACT
ATCAAATCCAAATCCAATTTTCCAAGAGTGTCAATGAGTCTGTAGTTCTT
TGTCTTCATTATTAACTGTTTGTGAAAACGAGGGAAAATAACTATTTTGC
CAATAATTATTAAAGCCTGGTAGTCTGACAAAGAGCCAGGTAGTTGAGCG
AGGGATGCTCGTACATGTAGCATCCCTTACTGATTGACCACAGCCTGTAT
CAATGTAAAATAAATGCTTTCCTTTAAAGTTAAAAGATTGTTGTATTTTT
CCTTTCTGAAGGAGGATATCCTCTGTTCAGCTTGGGTTGAATGACCTGAG
AAGTCGGATCCCTGAAGCTCCAGACTGGGAGGGCACTGGTATATACGACA
AGAACAACCTGGTCTCATACCAGGTGCAGGTAGAATTAGAACTGACAGGT
GAGACCATCTTCTCATCCTAATATGAACTGTCCACATTGCTTTTGTTGTT
CAGTAATTACCTTTGCCAAGAAGGTTATGTTTTGTGCAGCGTTTTTGTGT
GCATGTGTCTGTAAACATGATAACTTGAGAATGCCTGGATGGGTTGTCTT
CAAACTTGGCATGTGGGTATGTTTTCTTGAGACCTTGAAATGATTAGATT
TTGGGCTCCCTAGTGGCTTGATACGGTACTGCAGCAAAACGTCTTTGCTG
TTTCTGTAGAAGCTATATATTTTTTTTACAAGCAATACCTTCTCCTAAAC
TGTCCACATAAGAAACAAGAAGCTAAAACTGTTGTATGTTTATTGTCTTT
GAGAAATGTATTAATCTCATGATGACCATTAAATATATCCAGTTGAAGAT
ATGAAGTGAAGTGAACTTTATTGCTCAACAATCGTACATGGTACAATGTA
TGGCATGAAATCAACAATCTGTGCTACAAGGCTAATCTATCCTACAATTC
TAAGTACAAAATATTTTCGAAACTAGTGTATTTGTTACAATATATAGTCA
TGTATGGGTAATTCTGTCTCGCTTTTTGAATGATTTATGGAGAAATTGAC
CTATGTACATGGATATAGGAGTCGGACATGACAACAGTACATAGAAAATA
TCGCTCTGTGTACCAGATAGGGTGAAGTTTGTATGTGCTCTCCTTCTTTC
AGGTCATGCCACACCTCCCCCTGATAGCACCACAGAAGAGGAGCAACAAC
TGCAGAAGGAACTGTTGAACATCCTGGACGATGTGCCCAATCACATGACC
ACAGACGGCGCAGAAGGGGCACTGGACATCGACATAGATGGATATGACCT
GAAACCGCTTTCCAACGCTATCGACGCTCAGCCGTCTTCACTATTCTGTC
AGCCGGGGGCTGTCCTGAGGGGGAACTTCTGTGGTAGGATTGGATACTGA
CAGATTCTGTGTTTTTGGGATTTTCTTGGAATTGCAAGAATTCAATACAC
GTGGGAGTGGGACACAGGCAGCTATTGCTGGTGTCATGACCCACACACAT
AATATAGCCATCTTTTTACGGCTAGAGTGGGGAAAGTCGTGTAAAGTGCC
TTTTTCCCAAGGGCACAAGATCGGTGGCGTCAGGGGATTTTAAACCCGGG
ACCCTTGGGTTCTGTGCCAAAAACCCTGCCGTTACGCCACACGACCCCAC
AACAGATTTTGTGTTGGTCACCGATGATGCAACTTTGAACAAATGTATCA
GAACTACATGTATACGGTTGGAATGGTATGGTTTCTATGTCAATTGAAAG
TCAACATCATTACTGGTTTAGACTATCCAGTTGCATAAAGATGAAAAAGG
AATATTATTAATTTGTGGGGTCGTGTGGCAGGGCCCAGAACCCAGCAGTC
CTGGGTTCAATTCCCCTGGTGCCACCGATGTTGTGCCCTTGGGAAAAGGC
ACTTTACACGACTTTCCTCACTCCACCCAAGTGTAAAAACGGGTATAATA
TGTGTGGGTCACAACACCAGCAATAGCTGCCTCTATCCCACGCGTATTCT
AATCAAATCAAATCTAATCAAATCAATGATAAGTTTTATTGCACTAAACA
AAAAACTGGGTAAGATGCATTTTTGCATCAGACCTGCTGTTTAAGTGTTT
TATTCTGTCTGTGCAGTGAACTGTCCACAGGGAACATACTTCGATGTTCA
GAGGGGGGAGTGTGCAGCCTGTCCTGTTGGTACCTACCAGGACCTAGAGG
CACAGCTCCAGTGTGACATCTGTCCTCGCAAGACCTCCACAGCCACGCAG
GGATCAAAAACTGT Coding sequence (CDS) from alignment at Sc0000001:7102054..7108017- >transcript:BL97094_cuf9 ID=transcript:BL97094_cuf9|Name=transcript:BL97094_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=1821bp|location=Sequence derived from alignment at Sc0000001:7102054..7108017- (Branchiostoma lanceolatum)
ACGGAGGCAGCTGAGGGGGAGAACAGTGCCAATGTCACCTGGACGGTCGC
TGTTGCCACGGACAACGCAGACGACGAGGTGCCAATCACTGTCGTCCCCA
CAGTCTGGCCACCGCGACTGTTCTCCATAGGAGTGGTGAACGTGACATAC
TCAGCACAGGACAAGTCTGGCAACGTGGCACACTGTACCTTCACCATCAC
TGTCAAAGACACCCAGCCCCCTGTGATAGACAAGTGTCGGTCTCCGCCAC
CGTTCCTGTCCAAGACTGGGATGGCCAATGTGAGCTGGGAGGAGCCTCAG
TTCTCCGATAACTCTGGGGAGCCTTTAAAGATGCTGCGCAGCCACGAGCC
AGGGCTGTTCCCCTGGGGAACTTCCATTGTCAACTACACAGCAGTGGACA
CTGCAGGAAACAGCAAGAGCTGTAACATCATTGTCCATGTGCAACAACAT
GTATGTGATGTACCAGACGACCCCCTGTACGGTGGGAGCGACTGTAACAC
CATGGAGCGCGGCATCAACTGTACCCTGCACTGCTCCAACAGTCACGGGT
TCGCCATCCAGCCTGAGAACTTCTACTACTGCACCCTGGAAGGCAACTGG
CTCCCTACAGAACACCACAAGCCTTGGTGGCCTGACTGCTCAAGTAAAAA
GCTGGCCAATGATGCCTTGAAGCACATACAGATGTATTATGAGTCCAGTC
TGTGGTGCAACAACCCAGGCCTCTTGGACTCTGTGAAAGAAAGTGTCAGC
GCCATGGTGACGAACAGGATGTCAGGCTACTGTGGAAATGATATTGAGTG
TCAGCTGAGGCACGTGTCATCACGGTGTGTGCAAATTAACTATGGAGAGG
CCAACTGGAAACAGGTCCTGTCAGAGAGTGAAGAGCCCCAGTACTCTGAT
GTGATGTTCCACCCTGCAACAAATCTAAAGATGGGCAAGAGAAACAAAAG
AAACTTGATAAGTCACCTCAGGAAAAAACGCCTGAGCAGCAAACAAACTG
ACTTTGCACAGCAAACAAGAAGACACCTGAAGCGCCAACTTAGGAGTTTA
CAGATTAAGGAATCCAGAAGAGTTAAAAGAGACCGTGGGGATGAAGAGAC
CCAAGAAATCTATGGAAAGTGGACCAGGAGGACTTCTTCTAGTGAGTTTC
CCACATTAGACAGCATATTCAGTGGTTCCTACAAAACCTCTAGCAGAGAG
GATGTCAGAAGGGATGTGGAGAAAAATGGCAAACATCAAGAATCCATGTC
TGAAGAGATTGAGGCAACTGATGATCCTGAGGACCAGATAGGAGTGCCTT
CGTATAGGAGGATATCCTCTGTTCAGCTTGGGTTGAATGACCTGAGAAGT
CGGATCCCTGAAGCTCCAGACTGGGAGGGCACTGGTATATACGACAAGAA
CAACCTGGTCTCATACCAGGTGCAGGTAGAATTAGAACTGACAGGTCATG
CCACACCTCCCCCTGATAGCACCACAGAAGAGGAGCAACAACTGCAGAAG
GAACTGTTGAACATCCTGGACGATGTGCCCAATCACATGACCACAGACGG
CGCAGAAGGGGCACTGGACATCGACATAGATGGATATGACCTGAAACCGC
TTTCCAACGCTATCGACGCTCAGCCGTCTTCACTATTCTGTCAGCCGGGG
GCTGTCCTGAGGGGGAACTTCTGTGTGAACTGTCCACAGGGAACATACTT
CGATGTTCAGAGGGGGGAGTGTGCAGCCTGTCCTGTTGGTACCTACCAGG
ACCTAGAGGCACAGCTCCAGTGTGACATCTGTCCTCGCAAGACCTCCACA
GCCACGCAGGGATCAAAAACT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000001 | genome | Sc0000001:7102054..7108017 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97094_cuf9 |
| Biotype | protein_coding |
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