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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97099_cuf13 >transcript:BL97099_cuf13-protein ID=transcript:BL97099_cuf13-protein|Name=transcript:BL97099_cuf13|organism=Branchiostoma lanceolatum|type=polypeptide|length=767bp
VQVLKSELAFGRSKVNISDLRSRADGPSIKTHHKFHVEPGRTLFTRLTAC
HAGHKCADIAVKKRTILRAQDKLLTFQNGSNDDIELVHGHESENTSVIIA
KSQAGQGTGGVAAGVLTDHDVSMTYTSGTPYITNPAFTMHQTDRFLKNRV
RKGYGQSFFLASIGGDEVDAPLTVTVNFNDSALLRDEVPRVVFWEPESEI
WRDVHGTCTDSPGAVNYNWDEGQFTVKLCSTTTVQGHRIRRSEQRYFSGT
SQFAVVIINGTFQNEPPVLLSPLRMSMGEDEGTLTTQLVAADPEDDDLVF
RLDEQLQDSGDLVELDEQGTLQYKPALDFSGSREIPITISESRADSNPLL
STTLTIVIDVGDENDTPQPIVVHEGEEKLQGAGILRLTVEENHPENVDFE
VLRFVAGSYDVDAYDAMTLHIKAPSNGTIEVGKHVKDITFKEPNCTMSVA
AKIREWKDVFNKSWAGPDIPYPCGIILPHPPDLLNWAVAALTYTPDQHFF
GEDTVKVYAEDAFGARSKLVTVVIHVLANPCLNGGKCVGPESDPDCQDQS
RSDSFHDYTCNCTVGFEGKYCEINPNDCVPDPCPKNYTCIDQVNGYVCHC
EPGWPCNGLTLGEIVGITVGCLVALIILIVIFKLWMKRRGEARKVADSPA
GSRVELHGGSPVPPGAFLNPAYETVNVTEGKMGFNKVKEVWKEVEEVQFR
QELQEAPPKKMERPLQLPPLPVKQPLPLPSLSVERPQPLPPIAKPPPDED
FGSVYSLPGSVTSETEF Run BLAST on NCBI mRNA from alignment at Sc0000001:3656413..3662215+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97099_cuf13 ID=transcript:BL97099_cuf13|Name=transcript:BL97099_cuf13|organism=Branchiostoma lanceolatum|type=mRNA|length=5803bp|location=Sequence derived from alignment at Sc0000001:3656413..3662215+ (Branchiostoma lanceolatum)
GGTACAGGTGCTCAAGAGCGAGCTGGCATTTGGGAGGTCAAAGGTGAACA
TTTCGGACCTGCGCAGTCGGGCAGATGGCCCGAGCATCAAGACACATCAT
AAGTTCCACGTGGAACCTGGCAGGTGAAAAAACTGTTTCTTTCTTTCTTC
CTTTCTTTACTTTGACGCCTTTACAGTGGATTTTCAGAATGAAGTACAAA
GTGTTATATTGCAAAATTTTGCATTAAATGAAATTTGTGTCTCCTTCCAG
GACGTTGTTCACAAGGTTGACTGCTTGCCATGCCGGTCACAAGTGTGCAG
ACATCGCCGTGAAGAAACGAACAATATTGAGTAAGTGCAGAAATATACTT
CATAAAGAACACAGCTTCATAAACCCTTATCAAAGATATATAACCCCAAT
GTTCACGAAGATAGCTTCATCTAACTTACCATCGCCCATCTTTAAAGTTT
AAGGTCTTCAGTACCAGGGACAGGCGCCTTCCACTGCTTCCAAAGTCACT
TGTTTCACTTGTCACCATTGTTAACTTGCACTGTATATTTTTTCTATACA
TTATTTTATGTTGCAATTAGCCCTCGGGCAAGAACTTGCAAATACAACAA
AAAAACTCATTAAACTAAAGACTTCTCTGTGACACGTCAGGGGCCCAGGA
TAAGCTGCTGACTTTCCAGAACGGCTCAAATGATGACATAGAGCTGGTGC
ATGGGCACGAGTCCGAGAACACGTCCGTCATCATTGCAAAATCTCAAGGT
AACTCTCTTGCACTCCTCTTATGCAGTACAGTTAGTATCTATTATTTCAA
CCCCGTCATGAAGGCATGTTATATATTTTTATACAAGACTAAGCCCCATT
TTCTTCCTTCACATAATCAGATCCTAAAATAGGGACTGGGGGATTTTACA
TACATGTATCTCCATTATTATTCCGTAAGGGTTTTAGAAGATTTTGAGAG
GCGATGGAAAATCAAGAAATGTTTATGATCGATCTATGCTGAGTCTGGCA
ATGTAACTTTCCCAGCAGGACAGGGAACTGGAGGTGTTGCAGCTGGTGTT
CTGACTGACCATGACGTTTCTATGACGTACACTTCCGGTACGCCTTACAT
CACCAACCCGGCATTTACCATGCACCAGACGGACAGGTTCCTCAAAAACA
GGTACATTGAAATAATAGTACGGCGTTGCTGAAGAATAATGAAGTACAGG
CATGCCTGACTGTGTGCGGATGGTGTTCAACAGTTCAGGTTCATGTCTTT
TTATATATGTGTGTGGATGCTGCTCAACACCAAGTACAAGTGTGTTAACC
TGAGTGTAGATGGTGTTCAGCACCAAGGACAGGTTTTTTTAACCTGAGTG
TGGGTGGTGTTCAGCACCAGAGACGGACATGTTTGACAGTGCGTGGATGG
CATTTAGCAGCAGAGGCGGGTTTAGCATCCTGTCATGAACAATTACTGGC
CATCAGATCACAATCAATACATAGAATCAATGAATCTATCTATCATGCAG
GGTGCGAAAAGGTTACGGTCAATCGTTCTTCCTGGCGTCCATCGGAGGTG
ACGAGGTCGACGCGCCGTTAACAGTCACCGTAAATTTCAATGACTCAGCG
TTACTGAGAGATGAGGTGCCAAGAGTTGTCTTCTGGGAGCCAGGTAACTA
ATCTTTAATGATTAACAGTAACCTCTGAAGACTTTCTCCATAGTGGACAA
AGATTCATAAACATTTCGAAATATGCAAAATGTAATTTTCGATGAAAGCT
CAGCTGTGGTAAACTACTTTATTTTTTAAAGTTTAGTTTTTTGAAGAAGT
CCTGCTTTGGGAAACCAGTTCAAATGTCTAAAAAACCAATTTCGTCTTGT
TTGTCAAATTAATTAATACAATTAGCGAATATCCCCTTTTCACGTTTTAC
ACATGGACACCTCCCTTCCCTTTCTTATTCGTCTTATATTTGTAACATAT
TGCATTCAAGAAATAATTAATTCCACGAATATCCTACTGTTTTGTTCATG
TCACGTATGACTTTATGGTAAATTCCCCCCCCCCCCTACTGTTGCACATA
GAGTCTGAAATATGGAGGGACGTCCACGGCACCTGTACAGACAGTCCTGG
AGCGGTGAACTACAACTGGGATGAGGGACAATTTACTGTCAAGGTAATCA
CTATTTGCCAATTTTGAGCGACTTTCGTACACTCGTGAAATGCTGACAAT
AAACAAATACTTCATTGCATGCCAGGCTGACGCCAAACACGAATTTGTAC
ATCATATTTCCGGTCATAACCTTCAGCTGTGATAGTTCAGTGACCAATTT
GCATTGTACCTACACTTGCACGGCTCGGCTCGCTTCCCAATGGCCACTTC
TTGCCTAGCAAGCTAATGAACAATCATGTGTAACGGTTATGGATGTTGCA
TTCGCTTATGAGCTTAAAACATCGCCACAATTGTCATCATCATCATCTAA
ATATGTATTTCATACCTGGAACTCTTCTAGCATAACCTTTAGGTTCAAGC
TGTTTTAATGATAGGCCTTTTTCTCACCCTCTAAGCTCATTTGCGTCATC
CAAAGTATGAGTTTCAGTGATTGGAGCAAACAGCCTTATTTTTCAACGTC
TATATAAACGCAACTTCCTCTCCCCCTCAGCTTTGCTCCACCACGACAGT
ACAAGGCCATCGCATCCGTCGCAGTGAGCAGCGTTACTTCTCGGGCACGT
CACAGTTCGCTGTCGTCATCATCAACGGCACATTCCAGAACGAACCGCCC
GTCCTACTGTCTCCACTGCGCATGTCCATGGGAGAAGATGAGGGAACTCT
GACCACTCAGCTGGTCGCCGCAGACCCAGAGGATGACGACTTGGTCTTCC
GGCTGGATGAGCAACTGGTAGATGTTCCTTTTTTTTCAAATTCATTTTAT
TGTTCCAAAGAAAAAGACAATGCAAATGACATGCGTGCCACCTCCTATTT
CCTGACGGCCTTTCTAGTATATCAAAGGATGTACTATTGCAAAAAGGGTC
AACATAACACGACATCGCTATATATAACTGATTGTTGAACAATGTGGCGT
ACAAAGTACGTATATATATCGTTCTCATTTGATATGTGCAACTGTAGCTC
AAAATTTATTTCACTCATTCCATTTCAGCAGGACTCTGGTGATCTGGTCG
AATTGGACGAACAAGGCACGCTGCAGTACAAACCAGCCTTGGACTTCTCA
GGCTCCAGAGAAATCCCTATAACCATCTCCGAGTCACGTGCGGACAGCAA
CCCTCTCCTCTCCACCACCCTGACCATCGTCATAGACGTCGGGGACGAGA
ACGACACGCCGCAGCCGATTGTAGTCCACGAGGGAGAAGAGAAGCTACAG
GGAGCCGGGATCCTCCGCCTGACTGTGGAGGAAAACCATCCTGAGAACGT
CGACTTCGAGGTGCTGAGGTTCGTGGCAGGATCCTATGACGTTGATGCCT
ACGATGCGATGACGCTACACATCAAGGCACCTTCAAACGGCACTATTGAG
GTCGGCAAGCACGTGAAGGACATCACGTTCAAGGAACCAAACTGCACGAT
GTCTGTGGCAGCGAAGATACGAGAGTGGAAGGATGTCTTCAACAAGTCCT
GGGCCGGCCCTGACATCCCCTACCCGTGTGGTATAATACTCCCGCACCCA
CCAGATCTCCTGAACTGGGCTGTTGCCGCTTTAACCTACACTCCAGACCA
ACACTTCTTTGGGGAGGATACAGTGAAGGTCTATGCTGAAGATGCGTTCG
GAGCGAGGTCCAAGCTCGTGACTGTTGTCATCCACGTTCTTGCAAACCCG
TGCCTGAACGGCGGAAAATGTGTTGGACCTGAAAGCGATCCTGATTGCCA
AGACCAGTCGCGCAGTGATAGTTTCCATGACTACACGTGCAACTGCACGG
TGGGCTTCGAGGGAAAGTACTGCGAGATCAACCCTAACGACTGCGTACCC
GACCCGTGCCCGAAGAACTACACATGCATCGACCAGGTCAACGGCTATGT
CTGCCACTGCGAGCCCGGCTGGCCCTGTAACGGACTGACGCTGGGAGAGA
TCGTGGGGATCACAGTCGGCTGTCTAGTTGCGCTGATCATCCTCATCGTC
ATCTTCAAGTTGTGGATGAAGAGACGGGGGGAGGCACGTAAAGTCGCTGA
CAGCCCGTAAGTATACTGTATCTACCTTATCTACACTTGGAAACACTCGG
CACATTGGTGGCTGACAGGACCACGTGGAATATCTACCTTATACGTTGGT
CCCTTATGATTAACCATGTTTATAGGTCGTGGGGGCGCTGCATGTGGTAC
AGTGGTATAGCAGCTATATCTAGTCCGGGAAGTCTTTTAGCATCACCCCT
TGGACCAAGCTCTCTGCGCTCATTTGCGTCATCCGAAGAATGTGTTTCAG
CTATTGAAGCAGCTTAATTTTCATGCATATCAATATCTCTTTCAACTCCA
GGGCAGGAAGTCGGGTTGAACTTCATGGTGGATCACCGGTGCCACCGGGA
GCGTTCCTGAACCCTGCCTACGAAACCGTGAACGTGACCGAAGGAAAGAT
GGGCTTCAACAAAGTGAAGGAGGTCTGGAAGGAGGTAGAGGAGGTGCAGT
TCCGTCAAGTGGTAAGCATGTATTAGGCATTTTCAGTCACTTGAATATGA
CGTAATTTAGAGTCAGGAATAATTTTTGGTTAAAGATGTGTTCCAAGTCA
TTATGAGGAGAATGATCTCTATGTGACAGCCTACCTGGTTCAACATAGCG
CCCTTGATTATATACAGTAGCCATTTCCTCTATTTTCTTAATGTATTCCA
CGACTTCGGATAGTCCGTGTACTATACGTAGAGTGCAAAGCCCTTCAAGT
TACTCACGTGACCTTTGCTCTTTGAACCCTTTCGCTGCAGGAACTCCAGG
AAGCACCACCCAAGAAGATGGAGCGACCACTGCAACTTCCTCCATTGCCA
GTGAAGCAACCACTGCCGCTCCCCTCGTTGTCAGTGGAGCGACCTCAGCC
GCTTCCCCCAATAGCCAAGCCTCCACCGGATGAAGACTTCGGGTCTGTTT
ACAGCTTGCCCGGGAGTGTCACTTCTGAGACCGAGTTCTAAAGGACTGTT
TTGTCCGTTTGTGAAATGACTCAAGATTTGTGTCGTTGATTTGCATATGT
TTTTATAAAGGAGATGCCACGTCTAGCAATGTGTTCACTTTCCGCTTGCT
TGTTGTCATCATATAGAATACCAAATTAAACCAGATGCTGATTGAAGATG
TTTTTGGCATGTTTTTGTGGTATGCCATTTTTAGACGGGTATGTTATCAA
TTAACTGAAATTCAATACTATTAAGTCGCAGCACTGGCCTCTTAGCTTCA
CTTAAACGCTTGTGAAAACACAATAACCAGCACCTGACGGCTCATACGAT
GGTTTTTGTTACACTGTACCTGCATATTTAGCACTGTACCTTTGATACCA
GTTCATAGATATGCAACATCAACAGTAATTTGAACGGTCCAGTAATTAAA
TACAAATCGCTAGGGATTTTCATACATTACAATGAACACAGTTTGTAGTT
ACAGTTGATGTCCTGTTCCTGTTGTAACATGGGTGTTTCAGACCGTGTAT
CCAATTCTCAATAAATCACTCTTGCTTTGGTGTGTCTGCATGGACTTGCA
TGTATCAGTCTTTCACTTTGGACTTGTTTACTGTCTTTCTTACTACCATA
GATGACCCTCTTACATTTCCGAAGACAACAGAGTACATTGTTTTCGATAG
TAGCAAGCTAAAAGGTTTATTAAATATGTAGCGCCCGTGTCCTTAGACCT
GAT Coding sequence (CDS) from alignment at Sc0000001:3656413..3662215+ >transcript:BL97099_cuf13 ID=transcript:BL97099_cuf13|Name=transcript:BL97099_cuf13|organism=Branchiostoma lanceolatum|type=CDS|length=2304bp|location=Sequence derived from alignment at Sc0000001:3656413..3662215+ (Branchiostoma lanceolatum)
GTACAGGTGCTCAAGAGCGAGCTGGCATTTGGGAGGTCAAAGGTGAACAT
TTCGGACCTGCGCAGTCGGGCAGATGGCCCGAGCATCAAGACACATCATA
AGTTCCACGTGGAACCTGGCAGGACGTTGTTCACAAGGTTGACTGCTTGC
CATGCCGGTCACAAGTGTGCAGACATCGCCGTGAAGAAACGAACAATATT
GAGGGCCCAGGATAAGCTGCTGACTTTCCAGAACGGCTCAAATGATGACA
TAGAGCTGGTGCATGGGCACGAGTCCGAGAACACGTCCGTCATCATTGCA
AAATCTCAAGCAGGACAGGGAACTGGAGGTGTTGCAGCTGGTGTTCTGAC
TGACCATGACGTTTCTATGACGTACACTTCCGGTACGCCTTACATCACCA
ACCCGGCATTTACCATGCACCAGACGGACAGGTTCCTCAAAAACAGGGTG
CGAAAAGGTTACGGTCAATCGTTCTTCCTGGCGTCCATCGGAGGTGACGA
GGTCGACGCGCCGTTAACAGTCACCGTAAATTTCAATGACTCAGCGTTAC
TGAGAGATGAGGTGCCAAGAGTTGTCTTCTGGGAGCCAGAGTCTGAAATA
TGGAGGGACGTCCACGGCACCTGTACAGACAGTCCTGGAGCGGTGAACTA
CAACTGGGATGAGGGACAATTTACTGTCAAGCTTTGCTCCACCACGACAG
TACAAGGCCATCGCATCCGTCGCAGTGAGCAGCGTTACTTCTCGGGCACG
TCACAGTTCGCTGTCGTCATCATCAACGGCACATTCCAGAACGAACCGCC
CGTCCTACTGTCTCCACTGCGCATGTCCATGGGAGAAGATGAGGGAACTC
TGACCACTCAGCTGGTCGCCGCAGACCCAGAGGATGACGACTTGGTCTTC
CGGCTGGATGAGCAACTGCAGGACTCTGGTGATCTGGTCGAATTGGACGA
ACAAGGCACGCTGCAGTACAAACCAGCCTTGGACTTCTCAGGCTCCAGAG
AAATCCCTATAACCATCTCCGAGTCACGTGCGGACAGCAACCCTCTCCTC
TCCACCACCCTGACCATCGTCATAGACGTCGGGGACGAGAACGACACGCC
GCAGCCGATTGTAGTCCACGAGGGAGAAGAGAAGCTACAGGGAGCCGGGA
TCCTCCGCCTGACTGTGGAGGAAAACCATCCTGAGAACGTCGACTTCGAG
GTGCTGAGGTTCGTGGCAGGATCCTATGACGTTGATGCCTACGATGCGAT
GACGCTACACATCAAGGCACCTTCAAACGGCACTATTGAGGTCGGCAAGC
ACGTGAAGGACATCACGTTCAAGGAACCAAACTGCACGATGTCTGTGGCA
GCGAAGATACGAGAGTGGAAGGATGTCTTCAACAAGTCCTGGGCCGGCCC
TGACATCCCCTACCCGTGTGGTATAATACTCCCGCACCCACCAGATCTCC
TGAACTGGGCTGTTGCCGCTTTAACCTACACTCCAGACCAACACTTCTTT
GGGGAGGATACAGTGAAGGTCTATGCTGAAGATGCGTTCGGAGCGAGGTC
CAAGCTCGTGACTGTTGTCATCCACGTTCTTGCAAACCCGTGCCTGAACG
GCGGAAAATGTGTTGGACCTGAAAGCGATCCTGATTGCCAAGACCAGTCG
CGCAGTGATAGTTTCCATGACTACACGTGCAACTGCACGGTGGGCTTCGA
GGGAAAGTACTGCGAGATCAACCCTAACGACTGCGTACCCGACCCGTGCC
CGAAGAACTACACATGCATCGACCAGGTCAACGGCTATGTCTGCCACTGC
GAGCCCGGCTGGCCCTGTAACGGACTGACGCTGGGAGAGATCGTGGGGAT
CACAGTCGGCTGTCTAGTTGCGCTGATCATCCTCATCGTCATCTTCAAGT
TGTGGATGAAGAGACGGGGGGAGGCACGTAAAGTCGCTGACAGCCCGGCA
GGAAGTCGGGTTGAACTTCATGGTGGATCACCGGTGCCACCGGGAGCGTT
CCTGAACCCTGCCTACGAAACCGTGAACGTGACCGAAGGAAAGATGGGCT
TCAACAAAGTGAAGGAGGTCTGGAAGGAGGTAGAGGAGGTGCAGTTCCGT
CAAGAACTCCAGGAAGCACCACCCAAGAAGATGGAGCGACCACTGCAACT
TCCTCCATTGCCAGTGAAGCAACCACTGCCGCTCCCCTCGTTGTCAGTGG
AGCGACCTCAGCCGCTTCCCCCAATAGCCAAGCCTCCACCGGATGAAGAC
TTCGGGTCTGTTTACAGCTTGCCCGGGAGTGTCACTTCTGAGACCGAGTT
CTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:3656413..3662215 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97099_cuf13 |
| Biotype | protein_coding |
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