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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97107_cuf1 >transcript:BL97107_cuf1-protein ID=transcript:BL97107_cuf1-protein|Name=transcript:BL97107_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=377bp
PETTSVSKDGKDISETTSVSKDGEDIPEGSLVISKDGEDIPDVTSVTKDD
IDIPEACSYIIAHTSDLPYQQELNKVQRAEIAIVTTLQEDSRVLTANSIN
KAATWIKKGEDKSWVPHATRHLKEGINIITKTQDEVKTLVSPEACLKVTD
FTTSMKENLDYCVTLLAPENFDPSHWARMKAMVSSLANETPTAGKVFGKN
RQPFVPPKLATKIHEVTVEVAKQKGQDIPEPEPEPEPERSETPPPPPAPA
PPLKPKPKNKPKSPETVKRLYREAKSAKVVPIARPFKNQNFTLSEKLVAG
KIAKNSTETIKELVIKHGGTPVPFVHNSVLVCTKSEYKKKTGKVRDAITH
KIPIVFEEFIYDSIKAKKMLDIDDYSF Run BLAST on NCBI mRNA from alignment at Sc0000191:450662..455242- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97107_cuf1 ID=transcript:BL97107_cuf1|Name=transcript:BL97107_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=4581bp|location=Sequence derived from alignment at Sc0000191:450662..455242- (Branchiostoma lanceolatum)
CCCAGAAACGACTTCGGTAAGCAAAGATGGCAAAGACATCTCAGAAACGA
CTTCGGTAAGCAAAGATGGCGAAGACATCCCAGAAGGGTCCTTGGTAATA
AGCAAAGATGGCGAAGACATCCCAGACGTGACCTCGGTTACCAAAGATGA
CATAGACATTCCAGAAGCGTGCAGCTATATCATCGCGCACACGTCAGATC
TCCCATACCAGCAGGAGTTAAACAAGGTCCAACGGGCGGAAATCGCCATC
GTCACAACATTGCAAGAAGACAGTCGCGTCCTGACAGCGAACTCGATCAA
CAAAGCTGCCACCTGGATCAAAAAGGGGGAAGACAAATCGTGGGTACCAC
ATGCAACACGCCATCTTAAGGAAGGTATCAACATCATCACAAAAACACAG
GACGAGGTGAAGACGCTGGTGAGTCCAGAAGCCTGCCTCAAGGTGACTGA
TTTCACTACGTCGATGAAAGAAAACCTTGACTACTGTGTAACACTTCTGG
CCCCGGAGAACTTTGACCCTAGTCACTGGGCGCGAATGAAAGCGATGGTC
TCGTCTCTAGCCAATGAGACGCCCACAGCAGGGAAAGTGTTCGGCAAGAA
CAGACAGCCTTTCGTTCCACCGAAACTAGCCACGAAAATCCACGAAGTCA
CAGTGGTAAGTGTCAAACTTTATATACAGACTNTAACGTGGGGTCCCATA
ACTTCAAACGTAAATTTATGAGTTCGACATCGCATTGCACCAGTGTCGGT
TGTCTGAAAAATGTTGCGTTTTGACGAATGATAAATTAGAGTGGCGGTGT
TTAAGGATTTTCCGTTGTCGAGTTGATTTTACATCGTCCATGCACGATTT
ACACTATAATCTCAGTCGGTAAAACCAGAAAATTGTTGTTATGAATATAG
CGTTCCATATTGTTCCATTCAAATTAGGGTACCATAACTTCGACATACAT
ATACCTTTGTCTCGCTTTAATTTGTCGGCACGATTTTAAGTAAACAGACG
GAATAATTTTGTGTCAACTAACTTCAGCTTCCCTGTAGTAAATGATTTTT
TCACCGCGCGTAAGTAGCCACCGATGCGGGGCGCGCTGTGACTTAGCGAC
TGTTTACGCCGCTTGTTGCGTTCCAAGCCATGTCAACGTTGACGATCCGT
TCTTTGGTATGGCAATGAGAGTAGGTACTTCATTTCATACAAATGGTCCC
GTAGCATGAACGCAGAGAAGCCACAAATGTGCCACAAGTACGTCCAAAAC
TGCCGGGCAAGCATTGTTACACCGGAAACTGAAATTGTGACTTTTGCACT
CGGCACGGCACCGCATGTGACAGAAAGGACGCGGCAAATCTTCCTTGTTT
TTCCAGTCAATTCAATGCAAAGTTATGAAATATTTTAAACAACATCATCA
ATTGTTTTTAGAGCTCGCTATCCCTGATTTTCTATATATTTTTTGAGCAA
GCAATGAGAAATCGCTATTTACATTCAATGAACTTCGTGTTTATGCATTC
AGAGATCCCCGATCCCTGCCGCCCACATCAAAGCAAAGCGGCCTGTCAAT
TTTAATTTACATGCGGGGTTAGGTTACATGTTTGCAACATCAATGCCTTT
GCTTGTGGAACCACGTGCAAGCCGGCCGACGGAAACTTAACAAATGCAAG
TTTATCCGACGTGTTCCAAGCTAGATTAATAAGATTTGCCGTTTTGGAGC
CTCACTAGCGCTAGTACATGATTTAGACGGGGACCGTGAAATGTCAACAC
TGTAGCATCACATTCGAATCATGATCAATGGAATGGCCGTGACGTAAAGG
GGGAGGGCGTTCGAAGCCGCGGTTATTTCGTTATTTGAGACAAGTTTAAT
CGTGATATAATCTAACGAACACCTAGGTATTTTGTGTGTTTTGTATAGCT
TTATGCCTCATGTTTAAAACAAGAAAGTTTGCGTTACGATTGCTGACTGT
TCTTTATGTAAGAGTTGCCATTACGTAATGACCGTGCATCGAACGTAGCC
ATTGTTTATAGCCGAATTTTCCTGGTGGCGCAAAAATGAGTTAACTGTAC
ACAAATCCGTGTTTCATTCAGACGACAGCTATATGCATGAACTTGGGTTC
TCGGAAGTTCTATTCAGCACAGTGGATAGAAACAAATATTTCTCTCTTCT
GCATAATGAGACAAAGTAAAACTCGTTCGAAGTTATGGTACTGTCGAAGT
TATGGGACCCCACGTTACAAACTTTTACAAGATTCAAGAGAATCAAACAG
TTCAATGCTCATTTCATGTCAGAGGACTGTTTTGGGTGTTTTGGTAGATT
TAGACACGTGCCGTTACATGACAGGATTATATGTTTTATATGTAACTGTG
CGCTGCATTTCCATGACGGAGTACATATGATATACATAATATGACAAGAC
ACAGACACTTTAACTTTCATATTTATGATATATTTCTAGCTGATATATAT
TTTTTGCCGTTGAATATTTCATTCTTAAGTTCCCCAGACTATATCAAAAC
TAATATTTCATATATTTGGGCGTCTGTAGGAAGTCGCGAAGCAGAAGGGT
CAAGACATTCCTGAGCCTGAGCCTGAGCCTGAGCCAGAGCGCAGCGAAAC
ACCACCGCCGCCGCCTGCCCCTGCGCCACCCTTAAAGCCGAAACCCAAGA
ACAAGCCGAAGTCCCCAGAAACAGTGAAGAGGCTGTACAGAGAGGCTAAA
AGTGCCAAAGTCGTGCCCATAGCCAGGTAAATACGCTGAAGAGTCAAAGT
CCTAAACATAGAACCATTGACTCTAAAGACAGCGTCAATTCCAGATATTA
AATAAGTAGGCTACTGATTAATGTGTTTGTTAGATACCGACACATTTTAT
CAAATAGATAAAGAATTCTATGTATCATTACGTTATATGTCCTATTACAT
AATCGGGCATGTGCTCTCAGCTACATTATACAAAGCATATCACTTTATTG
GTACATATAGATTTTTTTTGTATGAACTATCTATCTACATGCATCCCATT
CAGGCCGTTTAAGAATCAAAATTTCACTTTGTCGGAGAAACTCGTTGCCG
GGAAGATAGCCAAAAACTCAACGGAAACCATCAAGGAACTCGTCATCAAA
CATGGGGGAACTCCCGGTGGGTGTACCCATATATTGTTTACATACTAGCT
GGTACTGTGACGGAAACATTATGAACTATATGTCGTTGACCTGGAATGCT
TCAAACAAAACAAACCGTGGCTACTGTGCAAATTTAGGAACTGTTGGGAA
AACACTCAGCCAGCAGATAATATTCCACCTGAGTAGTTTTGGCTTCTTCT
ACCATTTTTTACACGAAAAGCAATGAAAGAATGAATGAATGAATGAATGA
ATGTGAGTTTTAGATGGCCGGTCTGAGACATGATAGTTTCTAGCAAAGTT
CTTACATGTATCGTACAAGTCCATGCAGTTGAACGCCATAGACGTGACAC
AGTTTTTTTTTATTACTGACATATTCTCTTGACCGGATAGTTCCTTTTGT
ACACAACTCCGTTCTCGTCTGCACCAAGTCTGAGTATAAGAAAAAGACTG
GGAAGGTCAGGGACGCCATCACCCACAAGGTAAATGCTTTGACATTTAGT
GCCCACTAGTCAATATCTTTAAACATACACTACCTAAGGTGTGTATAACT
TTGATGCAATGAACTTTGTTGTTGAATTTTGGCGGCTGATGCCTCTGAAT
CATTGAAGAGATGAACATCTGCTGTTTGTGGACCGATTCTGTGCTTTTTA
AAATGTTTCTTTTTTACTTCTTCATCCCCTATTTTCACAGATCCCTATCG
TGTTTGAAGAGTTCATCTATGACTCCATTAAGGCCAAGAAGATGTTGGAC
ATCGACGACTACAGCTTTTAGTTTGTGATGCTAATTCAGTAGTGGAATAT
ATATATAGAAACTATTTCCTTATCTCCGTATTTCATGTACGATTTCACTT
CAATTTAAAAGAAGAATTGCACCCCTGATAGTGTAAAGAATTAGCATGAG
CTGAAGCATTCATCATAGTAACGACCTTCAGCATTGTCTTGCAGTACAAT
GAACACGCAATTGTAAAACATCACGTCTATGTGGACCTAGCGTAGGATGG
CGTTGGTCCCTCAATGGATCCATGCGTTCTGTTGGCAATTACATCAAACG
CGGGGTACTAATTATAACAATCATAAGCAGGGAGTTCTTCTTCTTCTTTC
GGTTTAGGCAGCCGCCTTCAACGTGGTGAAGATTTTGCTGCCTTTCAACT
TACTGGAAGTCTACTGCAAGTTGGGAGTGAGGATGTGAGATGTAACAAAC
CGGGGATTGGGAATGGGAGGGGTGGGGAGTTAAACCTGTTAAACCTGTTG
TTTGAAACTCTCGAGAGTTGAACTGANCAGCAGTGCATTTTTTCTACTGC
TGACAGGATCGTCCTCTCAGTAGTGCAATTTTTCTACTGATCATCCTGTC
AGCAGTGCAGATTTTTCCTGCTGACAAGATTTTTCAAATCTAGGCATCTT
GTTTTTTTCGGCCCTTCTTGTTTTTTTTTCGCGCTCTCGCATTAGATTTA
GGGTTTCCAAAGGACGTCATCCATAAAAATT Coding sequence (CDS) from alignment at Sc0000191:450662..455242- >transcript:BL97107_cuf1 ID=transcript:BL97107_cuf1|Name=transcript:BL97107_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1134bp|location=Sequence derived from alignment at Sc0000191:450662..455242- (Branchiostoma lanceolatum)
CCAGAAACGACTTCGGTAAGCAAAGATGGCAAAGACATCTCAGAAACGAC
TTCGGTAAGCAAAGATGGCGAAGACATCCCAGAAGGGTCCTTGGTAATAA
GCAAAGATGGCGAAGACATCCCAGACGTGACCTCGGTTACCAAAGATGAC
ATAGACATTCCAGAAGCGTGCAGCTATATCATCGCGCACACGTCAGATCT
CCCATACCAGCAGGAGTTAAACAAGGTCCAACGGGCGGAAATCGCCATCG
TCACAACATTGCAAGAAGACAGTCGCGTCCTGACAGCGAACTCGATCAAC
AAAGCTGCCACCTGGATCAAAAAGGGGGAAGACAAATCGTGGGTACCACA
TGCAACACGCCATCTTAAGGAAGGTATCAACATCATCACAAAAACACAGG
ACGAGGTGAAGACGCTGGTGAGTCCAGAAGCCTGCCTCAAGGTGACTGAT
TTCACTACGTCGATGAAAGAAAACCTTGACTACTGTGTAACACTTCTGGC
CCCGGAGAACTTTGACCCTAGTCACTGGGCGCGAATGAAAGCGATGGTCT
CGTCTCTAGCCAATGAGACGCCCACAGCAGGGAAAGTGTTCGGCAAGAAC
AGACAGCCTTTCGTTCCACCGAAACTAGCCACGAAAATCCACGAAGTCAC
AGTGGAAGTCGCGAAGCAGAAGGGTCAAGACATTCCTGAGCCTGAGCCTG
AGCCTGAGCCAGAGCGCAGCGAAACACCACCGCCGCCGCCTGCCCCTGCG
CCACCCTTAAAGCCGAAACCCAAGAACAAGCCGAAGTCCCCAGAAACAGT
GAAGAGGCTGTACAGAGAGGCTAAAAGTGCCAAAGTCGTGCCCATAGCCA
GGCCGTTTAAGAATCAAAATTTCACTTTGTCGGAGAAACTCGTTGCCGGG
AAGATAGCCAAAAACTCAACGGAAACCATCAAGGAACTCGTCATCAAACA
TGGGGGAACTCCCGTTCCTTTTGTACACAACTCCGTTCTCGTCTGCACCA
AGTCTGAGTATAAGAAAAAGACTGGGAAGGTCAGGGACGCCATCACCCAC
AAGATCCCTATCGTGTTTGAAGAGTTCATCTATGACTCCATTAAGGCCAA
GAAGATGTTGGACATCGACGACTACAGCTTTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000191 | genome | Sc0000191:450662..455242 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97107_cuf1 |
| Biotype | protein_coding |
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