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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97159_cuf9 >transcript:BL97159_cuf9-protein ID=transcript:BL97159_cuf9-protein|Name=transcript:BL97159_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=118bp
RRTTLGVCIKGIMCVGGPQTTVPPPTPSISDELPSDDEDDVGSGESNNKG
KNLALDKTTEQSSLWDAGYSSNAVDGDRSTNWYSASCTHTAVSLRDDVWD
VGTTDPWWYVDLGSSYPI Run BLAST on NCBI mRNA from alignment at Sc0000119:638082..640494+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97159_cuf9 ID=transcript:BL97159_cuf9|Name=transcript:BL97159_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=2413bp|location=Sequence derived from alignment at Sc0000119:638082..640494+ (Branchiostoma lanceolatum)
GCGAAGAACAACACTTGGAGTCTGCATCAAGGGGATTATGTGTGGTAAGT
ATGGCATAAATCACTGCACGAAATGGCCTCGGATCCTAACGTATCCTGAC
GTGATTCGGAACCTACGATCCGGAAGAATCCGAACGGATCCGGGGCCGTA
TATTTCTCGGCGGGCTAATGCGCATCCAAACTTGGGACTTAAGGTACCAC
TTACACAAGTTGTGTAAGTACGTATTTACACAACTAAGATATGCAAGTGG
TACATTGAGTCCCAATATTTGGATGCCAATAATAGCCTGCCGAGAAATAT
ACGGCCCCGGATCCGTTCGGATTCTTTCGGTTCCGGATCACGTCAGAATA
TGTCAGGATACGTCAGAATACGTCAGGATACGTCAGGATCCGAGGCCATT
TCATGCAGTTACTGCTGCTAAACTGAAGGGCTCATTCAACTCAACATCTC
CTGGTGAACTGCTGTACTTTATTTCAATTAAAAAAACATATTTTAAGTGA
CTGCGTATAATTAACTCCGTATAAGGCATTTTGTTCGGTGCGTCTGTATG
TTTTCGTCTGTTTGCTTTAAGCATAGGTTTTCCTGTAATAACTTAAGATA
GTACGGATAGATTGTAATGCTGTGGGTATGTGTTGGAAAGGCAAAGATCA
AGGTGCCGGTCCTCCTGGCAATTTCGTAATATTCGTTTTGCATTTTTTTT
TCTGATTGTCTTAGACATGATGCGGGTTTGGTTTTCAGTAGCAGATTTTG
ATGTCATGAAGAAGTGGTGGCGGGTTGAGCCCCCTAACATTTATTTTGTA
ACTGCAGGGGCGTTTTTGTTAAAAACATGAAGGCAGTAAGGTTGATGAGC
TTTTTATCTGTCTTTCCTTTTACAGTTGGAGGCCCACAGACGACAGTCCC
TCCCCCAACTCCGTCCATATCTGATGAATTACCGAGCGATGACGAGGACG
ACGTTGGGTCTGGGGAGTCAAACAACAAAGGTAAAGCCCCTGTCACACTT
GTGCGTATATACAAGCCGGCATGAGTTGCGTTTCAACACGTTTTTGGTTC
AGGTTAAGTTTGCAGCCGAATATGTAATTTCCTTGGTTTGATTACCAGAC
TGCACAACGATGGGTCAAAGCAGAAAAACAACTTCCTCCCCGCAAAATTT
ACTTAAACCAAAAAAATGTTACTGTTGAACTCATGCGCACTTGAATATAC
GCAGGGCCCTAAGATTAATGTACAACAGGAACACACATACATATTTTTAA
AAGATTGTTTGGTTCTTGGTGGCAAATGTTCTAGGTGTTGGCAAATCACC
ATCCAAATTCGTAGTGTGTTTTTTGGGACACTTTTAGACAGATCAGCCGA
AGAAGCTCTGTAGACGTCACTCCACTGCCAGGGCGGGTCGTGTAAAGAGC
CTTTCCCAAGGGCACAATGTCGGGGCATGGTGAACATCGAACCCGGGCCC
ATTGGTCGGTTGAGTCCAACGCTCTAACCGTTGCGCCACACCGACGCAAC
ACTTACATTATGTAGATAATAGATATACAGATAGACATAGACATAGATAT
ATAGATATAGAAATATAGACAAAGATATATATTCGCCAAAAATAGTAACT
CAGGCAACTGGATAAAATTTTGAAACAGTCAGACAGCATCCGCTATCTTT
CGTCAGTGACTGAAGACAGCGGATGCTGTCTGAAGCGTCTGACTGTGTCA
AAATTTTATCCAGTTGCTTGAGTAACTATTTTTGGCGTATCTTACTACCT
GGATGTCTAACCTTCATCAACGTATCAAAGATATTAATAATAGTTGCGTC
GTGTGGCGCAAGTGTAGAGCGCGCGGCTGTCAAACAATGGGACCAGAGAC
ATGTCCGAACTTGCGCCACGACGTTGTGCCCTTGGGAAAGGCACTTAATA
CGACTTTCCCCACTTCACTCAGGTGTAAATGAGTACCTAGCTCATCTAGG
CTTAGGGACGTCCCTCGGATAGGACGTTAAATGGAGGTCCCGTGTTTGGG
GAGATCCACACCCCGCGCACGTTAAAGAACCCACTTCACCTTTCGAAAAA
GAGTAGGGGCATGCCCCGTTGTGCGATGGTCCAAACCTTACAGTCTGGTC
TGGGATGTCATCTTGAAAAGGTAATAGTCACCTGTTATGTCAATCCTTCC
ACAAATGTGGTAAATCGAAATAAATAAATATATATTCTTTTTGTTTTTTT
GTGATAGGAAAGAACCTGGCTCTTGACAAAACAACGGAGCAGTCTTCCCT
GTGGGACGCAGGCTACTCGAGCAACGCGGTTGACGGAGACCGCAGCACGA
ACTGGTACAGCGCGTCCTGTACGCACACCGCGGTCAGCCTTCGGGACGAC
GTCTGGGACGTCGGTACAACAGACCCCTGGTGGTACGTGGATCTCGGCTC
GTCGTACCCCATC Coding sequence (CDS) from alignment at Sc0000119:638082..640494+ >transcript:BL97159_cuf9 ID=transcript:BL97159_cuf9|Name=transcript:BL97159_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=1062bp|location=Sequence derived from alignment at Sc0000119:638082..640494+ (Branchiostoma lanceolatum)
CGAAGAACAACACTTGGAGTCTGCATCAAGGGGATTATGTGTGTTGGAGG
CCCACAGACGACAGTCCCTCCCCCAACTCCGTCCATATCTGATGAATTAC
CGAGCGATGACGAGGACGACGTTGGGTCTGGGGAGTCAAACAACAAAGGA
AAGAACCTGGCTCTTGACAAAACAACGGAGCAGTCTTCCCTGTGGGACGC
AGGCTACTCGAGCAACGCGGTTGACGGAGACCGCAGCACGAACTGGTACA
GCGCGTCCTGTACGCACACCGCGGTCAGCCTTCGGGACGACGTCTGGGAC
GTCGGTACAACAGACCCCTGGTGGTACGTGGATCTCGGCTCGTCGTACCC
CATCCGAAGAACAACACTTGGAGTCTGCATCAAGGGGATTATGTGTGTTG
GAGGCCCACAGACGACAGTCCCTCCCCCAACTCCGTCCATATCTGATGAA
TTACCGAGCGATGACGAGGACGACGTTGGGTCTGGGGAGTCAAACAACAA
AGGAAAGAACCTGGCTCTTGACAAAACAACGGAGCAGTCTTCCCTGTGGG
ACGCAGGCTACTCGAGCAACGCGGTTGACGGAGACCGCAGCACGAACTGG
TACAGCGCGTCCTGTACGCACACCGCGGTCAGCCTTCGGGACGACGTCTG
GGACGTCGGTACAACAGACCCCTGGTGGTACGTGGATCTCGGCTCGTCGT
ACCCCATCCGAAGAACAACACTTGGAGTCTGCATCAAGGGGATTATGTGT
GTTGGAGGCCCACAGACGACAGTCCCTCCCCCAACTCCGTCCATATCTGA
TGAATTACCGAGCGATGACGAGGACGACGTTGGGTCTGGGGAGTCAAACA
ACAAAGGAAAGAACCTGGCTCTTGACAAAACAACGGAGCAGTCTTCCCTG
TGGGACGCAGGCTACTCGAGCAACGCGGTTGACGGAGACCGCAGCACGAA
CTGGTACAGCGCGTCCTGTACGCACACCGCGGTCAGCCTTCGGGACGACG
TCTGGGACGTCGGTACAACAGACCCCTGGTGGTACGTGGATCTCGGCTCG
TCGTACCCCATC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000119 | genome | Sc0000119:638082..640494 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97159_cuf9 |
| Biotype | protein_coding |
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