|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97192_cuf7 >transcript:BL97192_cuf7-protein ID=transcript:BL97192_cuf7-protein|Name=transcript:BL97192_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=503bp
MAKLDLGLAVAVAFAIFLVVSSESTHTCLQPLGMESGVIPDNRITASSYI
RLNFEPYRGRLNGAAGAGAWAAGSNTIGEWLQVDLGSTKRITGTMIQGRV
THDQWVTSYKLQFSQDGTSWTAYQGGNGAEKVFEGNTDRNTPVTNLLDPP
VDARYVCFYPQTWNNHIGMRAEVLGCNTDTQTTTALHSSTTKTTIMATTT
AATTTLGATPAPTPTHGSTTAATPTHGSTTAATSTPGTTTVPTTTPITTS
AATTSPLTTSAAPTTPLTTTVPTTTPITTSAATTSALTTSAATTSPLTTS
AATTTPGPVTTTVASTTPITTTPGSTNAATTSTSGATTGCPPGYAPFGGS
CFKAYNQDKTYNQARQVCAADGGLLAMPKDKDADDFLRNLKNGVDPNSPF
WLGLSSEKGKAGWVWEDGTPHDTAADRPYGGWQLGEPSNKGGGGGVCANH
FETGWNDAPCSSAQKFICQLNDAVHCPLGYLRCGHGHGCILAWKRCDGRT
DCS Run BLAST on NCBI mRNA from alignment at Sc0000069:1141043..1146126- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97192_cuf7 ID=transcript:BL97192_cuf7|Name=transcript:BL97192_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=5084bp|location=Sequence derived from alignment at Sc0000069:1141043..1146126- (Branchiostoma lanceolatum)
TTGACTCCGGAAGCCCGTTGCTAACCAGCGTATGTCAGTATAATTTCCCT
TGGGACCGTCTGTGCTTGCATCGGACTAAGACCACGGCTTTCCTGTGCTC
TTCTGTTTTCGTGTTTTCGACCGAGACATTTGAGTCGGTCGAACATACAG
AAACATGGCCAAGCTAGACCTAGGCTTGGCTGTTGCTGTTGCGTTTGCCA
TTTTTCTTGTTGTCTCTTCTGAATCAACGCACAGTAAGGAACATTTAGTC
TACTTTATAGCTGTGTTGCCTTTTGTTGGCTTAAGTTGCGTTAAATTGTT
TTAGACAGTAGAAGAAGTCTTTATGATTTGCCCTGCCTCATTGTCTATGA
TACCGTATGATGTAGCATCAATTCAACGTGTGCGTACATTTCTTTTTTTT
TGCATGCTTTTAGTTATTTTTCTGTATATCGTATGGCAAAAAATTAGCGC
TCTTTGAAACCACAAGCAAATATAAAACACAAAGACAGGAAAGCACAGAC
GGAAGATGGTCATTTGAATATCAAACCTAATGCCTGTATTGCCAACCACA
ATATTGGCGACAGTGGTCGTTGCAAATTTGATCCGTGGACACCTTAGTGT
TTGAAGAATGTTAAGCATTGTACTATAATTATTACCAACACCGTTGAGCT
TCCATCATACTTTTTCTTGTCCTCCCAGCCTGTCTTCAACCACTTGGGAT
GGAGTCGGGTGTCATACCTGATAACCGCATCACTGCGTCCTCGTACATTC
GCTTAAATTTCGAGCCCTACCGCGGTCGGTTGAACGGAGCTGCCGGTGCA
GGCGCCTGGGCAGCAGGAAGCAACACCATCGGGGAATGGTTGCAGGTAGA
CAGACATTTTGATCTGATAAACAGTCGCGAAAGTTTAGAAAATGAATGTT
TTCTATGAACTTCATCCCCTAGCTCCCACCATTAGAATATCTATGTTTGT
GTTGAACTTAGTATACAAGGAGGAGTGGTCCGATCTCTGTCATTCTTAAA
AAAGACGAATAAAGCCAATCCGGTCTAATTCCGTCTCAGGGGTGTCATTA
TCCTAGAACTACGAATGGCAGTCGCGCTCTGCTAGTTTGGAAAAGGAATA
TCTTCTATGAACTTCATCCCCTAGCTCCCACCATTGCAACATCTATGTTT
GCGTTAAACTTGAGCCGGTATCAACTTTGTTATTCAACTAAATGTCATAT
TTCCTTTATCTCAAAAGTACAAAAGGAGGAGTGGTCCGATCTCTGTCATT
CTTCGAAAAGACGAATTAAGTCGAAACCGGTCTAATTCCGTCTCAGGGGT
GTCATTATCCCAGAACTACGAATAGCAGTCGCGCTCTGCTAGTTTGGAAA
AGGAATATTTTCTGTGAACTTCATCCCCTAGCTCCCACCATTGCAACATC
TATCTTTGCGTTAAACTTAATTCGGTATCAACTTTGTTATTGAACTAAAA
GTCATATTTGCTTTATCTCAACAGTGTCCCTACTTTAATAAGGTCTAGAT
TTGATATGTTTGGCATGGAATGTGCTGTATCGAGAGTACAATGTACCCTA
CTTGTGGTCTCCTTTCAATGAAGACCGAGAGTTAGTTAGAAAGAGTTAGT
TTGCTCTTGCATTCATGTGAACTTCTATAACGAAAAATAATTATTGACCG
TAGGTGGATTTAGGGTCGACGAAGCGTATCACGGGCACCATGATTCAGGG
CCGCGTCACACACGACCAATGGGTGACCTCCTACAAACTTCAGTTCAGCC
AAGATGGCACTTCCTGGACAGCATATCAAGGCGGCAATGGCGCAGAAAAG
GTGTCCTCTTGATTATGTCTCCATTTTGTAAATTATGGGGGAAACTGTTA
TTATCTGTTATTGTATTACATGTATCTTACATCTTCTACAGTATACCCAT
GGGTGTCATTTAATCTAGTCTACAATGTAATCCTTATCTTCTGTACATGT
CAGTGTCATTTGCTTTGAGATATTTCTCGCAATCTCCCGATTACAAAGCG
AGCACACTACCAATTACGCTATTGCATCGGTGTCATGTATATCAAATAAT
GTCTAGACGCTAGAAATTGTTCCAATGATTGTAAAAGTTCATCATCCCAT
TCTATATACTCTTGTATTAGGTAGATTAGCTTTATAGAACTGTAAGTACC
AGTAGATGCCATATTTTCTACCTTGTACAGTTGTTGTGCAATAAAGTTAA
ATCATATGAATCCGTTCGCCTTTCAGGTATTTGAAGGCAATACGGATAGG
AACACCCCCGTGACCAATCTACTGGACCCCCCGGTTGATGCCCGCTACGT
GTGTTTCTACCCTCAAACTTGGAATAATCACATCGGCATGAGGGCAGAGG
TTCTGGGCTGCAACACAGACAGTAAGTTTCTTAGAAACTATAAGGTATTT
TAAGTCTTTGTTGAGGCTGACCTACAATTTAAAACATTTTCACTCTTCCT
GTATAATCGGAGGAAAGTAAAGGTTCTTTTTCTCCTTTCTCCTTTCCAGT
TTCCCTTTTCTTTCTTATGAGTTCTATTTTCAGCGGACCAAACGCCTATC
CAGATAAGTGCCATTCATTTATGCCTAGGGCAAGCTGTAACAAATCAATG
GGTGCAAATACACGGTTAAGTGCATTTGATTTTCAGCTAAGCATTTTTAA
TCCAGAAATTGAAAATAAACAGTGATCTATGATATATATCATTACCTTCT
GCACTTTTCAAGAATAACGTTACTCACATGCAATTAAGGGCCAAAAAATA
TGTAGGATGACAAATAGATGAAACTATGCACTCACTGTTGACCAGCAAAA
TAAAAAATATAATGCATTCTACACTCACTGATGTAATCTCTATTCTTTTT
TTCTTTTTTCTGATGAGTAGACAGTCGAACCTTTATCATAATGAAAAAGA
ATGCAACATAACATAACAGCCTGACAGATGTTCTGGTAACAAGTGTGTGT
TACAGCTGTTTGATGTTGTGTTGCCTGTGTGACTAATGGCATTTCCTGTG
TCAGGAAAACGCCCGCTGATGAATAAATTATTACTCCCAAATTGCCCTGG
CTCGTCTTTTGTGAAGGGATCATGAGTTCGAGATGGGTCATTATGTATTT
GCCAGTCATTCAAAGAATTACACTCCTTTGTTNTCTTCAACCACTTGGGA
TGGAGTCGGGTGTCATACCTGATAACCGCATCACTGCGTCCTCGTACATT
CGCTTAAATTTCGAGCCCTACCGCGGTCGGTTGAACGGAGCTGCCGGTGC
AGGCGCCTGGGCAGCAGGAAGCAACACCATCGGGGAATGGTTGCAGGTAG
ACAGACATTTTGATCTGATAAACAGTCGCNTACCATCAAAGGGATATTCA
AGACTTTCCACTGAAAGTAGCATTTGAGATTGCCACTTAAATTCTATCAT
TTCAGTATTAATTCCCTTCATGGACCAGAGAGTATTTGTAATGTAAAATG
CTACAAGTAGTTGTTTTTTTACAGCCAGCTGTTGCAGCTTTTTGTCCATG
TATCTTATTGTCATGTTGGAAGTTTAATTCAAGCATAGTTAGCATTAAGG
GGTGCATCTTTTTTTTTTTCAAATTGCAGCCCAAACAACAACAGCTCTAC
ATTCATCCACTACAAAAACCACAATCATGGCAACCACCACTGCGGCAACT
ACTACTCTTGGAGCTACTCCTGCGCCCACTCCTACTCATGGATCTACTAC
TGCGGCCACTCCTACTCATGGATCTACTACTGCGGCCACTTCTACTCCTG
GAACTACTACTGTGCCCACTACTACTCCTATAACTACTTCTGCGGCCACT
ACTTCTCCTCTAACTACTTCTGCGGCCCCTACAACTCCTCTAACTACTAC
TGTGCCCACTACTACTCCTATAACTACTTCTGCGGCCACTACTTCTGCTC
TAACTACTTCTGCGGCCACTACTTCTCCTCTAACTACTTCTGCGGCCACT
ACTACTCCAGGACCTGTAACTACTACTGTGGCCTCTACTACTCCTATAAC
TACTACACCTGGCTCTACTAATGCGGCCACTACCAGTACTTCAGGAGCAA
CAACAGGTGAGGCTGATGTACATTTGACAGCGATGGTGGAGGCCTCCGGG
CTAAGACAGTGACCGAAGTCAAGTAACTCTTTATAACACTTTTGAAATGT
AGACTGAGACAACTGATAAGAGATCACATTGTATGTATGGTCGATGTACA
TAATATAAGTTTTGCCCAGGAAAGGCCACAGTAGGAGATACTTCCTTATT
GCTGTACCCAGGGCACAACCATCTCATCTTTAATGTTTTTTTTTATAGGT
TGTCCTCCTGGCTACGCTCCGTTCGGGGGTTCGTGCTTCAAGGCGTACAA
CCAAGACAAAACCTACAACCAGGCCAGGCAGGTGTGTGCAGCGGACGGAG
GGCTTCTGGCCATGCCGAAGGACAAAGACGCGGACGACTTCTTGAGGAAC
CTGAAGAACGGCGTAGATCCCAACTCCCCTTTCTGGCTCGGCCTGAGCAG
TGAGAAAGGCAAGGCTGGTTGGGTGTGGGAAGATGGGACTCCACACGACA
CAGCCGCAGACCGGCCGTATGGTGGATGGCAGCTGGGGGAACCCAGCAAT
AAAGGAGGAGGAGGAGGAGTCTGCGCAAACCACTTCGAAACCGGATGGAA
CGACGCGCCCTGCTCGTCTGCGCAGAAGTTCATCTGCCAGCTGAATGATG
GTATGTCATGTAACATTGTATAGTTACACAAACATGCACAAAACACGTAC
ATACAATGTCTATATTAGAAGCAGTTAGATGTTAATATTTTGGTGCAAAA
TCCACTGTTTTGCCAATGAAAAAAAAAAGTTTCACCAAAAGGGCTCAGAT
ACCGGGAACGTCCATGAAATGCTTTTTTGTGTACTGTTCATTCTGGTTTA
AAGCTTATAATTAGACGACGTGCTTTTTTATAGATGGAGCGTAACAAAAT
GAAGAACACAAGTAACAGTCTGAGATTGTTTCTCTGCACAGCAGTCCACT
GCCCCCTGGGGTACCTCCGGTGCGGACACGGACATGGCTGCATCCTGGCC
TGGAAGCGCTGTGACGGGCGGACGGACTGTTCAG Coding sequence (CDS) from alignment at Sc0000069:1141043..1146126- >transcript:BL97192_cuf7 ID=transcript:BL97192_cuf7|Name=transcript:BL97192_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=1509bp|location=Sequence derived from alignment at Sc0000069:1141043..1146126- (Branchiostoma lanceolatum)
ATGGCCAAGCTAGACCTAGGCTTGGCTGTTGCTGTTGCGTTTGCCATTTT
TCTTGTTGTCTCTTCTGAATCAACGCACACCTGTCTTCAACCACTTGGGA
TGGAGTCGGGTGTCATACCTGATAACCGCATCACTGCGTCCTCGTACATT
CGCTTAAATTTCGAGCCCTACCGCGGTCGGTTGAACGGAGCTGCCGGTGC
AGGCGCCTGGGCAGCAGGAAGCAACACCATCGGGGAATGGTTGCAGGTGG
ATTTAGGGTCGACGAAGCGTATCACGGGCACCATGATTCAGGGCCGCGTC
ACACACGACCAATGGGTGACCTCCTACAAACTTCAGTTCAGCCAAGATGG
CACTTCCTGGACAGCATATCAAGGCGGCAATGGCGCAGAAAAGGTATTTG
AAGGCAATACGGATAGGAACACCCCCGTGACCAATCTACTGGACCCCCCG
GTTGATGCCCGCTACGTGTGTTTCTACCCTCAAACTTGGAATAATCACAT
CGGCATGAGGGCAGAGGTTCTGGGCTGCAACACAGACACCCAAACAACAA
CAGCTCTACATTCATCCACTACAAAAACCACAATCATGGCAACCACCACT
GCGGCAACTACTACTCTTGGAGCTACTCCTGCGCCCACTCCTACTCATGG
ATCTACTACTGCGGCCACTCCTACTCATGGATCTACTACTGCGGCCACTT
CTACTCCTGGAACTACTACTGTGCCCACTACTACTCCTATAACTACTTCT
GCGGCCACTACTTCTCCTCTAACTACTTCTGCGGCCCCTACAACTCCTCT
AACTACTACTGTGCCCACTACTACTCCTATAACTACTTCTGCGGCCACTA
CTTCTGCTCTAACTACTTCTGCGGCCACTACTTCTCCTCTAACTACTTCT
GCGGCCACTACTACTCCAGGACCTGTAACTACTACTGTGGCCTCTACTAC
TCCTATAACTACTACACCTGGCTCTACTAATGCGGCCACTACCAGTACTT
CAGGAGCAACAACAGGTTGTCCTCCTGGCTACGCTCCGTTCGGGGGTTCG
TGCTTCAAGGCGTACAACCAAGACAAAACCTACAACCAGGCCAGGCAGGT
GTGTGCAGCGGACGGAGGGCTTCTGGCCATGCCGAAGGACAAAGACGCGG
ACGACTTCTTGAGGAACCTGAAGAACGGCGTAGATCCCAACTCCCCTTTC
TGGCTCGGCCTGAGCAGTGAGAAAGGCAAGGCTGGTTGGGTGTGGGAAGA
TGGGACTCCACACGACACAGCCGCAGACCGGCCGTATGGTGGATGGCAGC
TGGGGGAACCCAGCAATAAAGGAGGAGGAGGAGGAGTCTGCGCAAACCAC
TTCGAAACCGGATGGAACGACGCGCCCTGCTCGTCTGCGCAGAAGTTCAT
CTGCCAGCTGAATGATGCAGTCCACTGCCCCCTGGGGTACCTCCGGTGCG
GACACGGACATGGCTGCATCCTGGCCTGGAAGCGCTGTGACGGGCGGACG
GACTGTTCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000069 | genome | Sc0000069:1141043..1146126 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97192_cuf7 |
| Biotype | protein_coding |
|
