transcript:BL97208_cuf8 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL97208_cuf8
Unique Nametranscript:BL97208_cuf8
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL97208_cuf8

>transcript:BL97208_cuf8-protein ID=transcript:BL97208_cuf8-protein|Name=transcript:BL97208_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=169bp
KTTNVTVQSRSADFYQRVTVEAGTVQAIAIPKRYEIQGYALDAFGLKVTS
DEEIALYGLYSKTSAADGFLAYPLDTLGTEYYAVCLPPSASEPSLITVIG
TVDGTAVFVNVTAPATFTGIMYQPGQIIRFFLNAQQTAQIQSSGDLTGSY
ITADSDIVVYSGNKFTQIA
Run BLAST on NCBI

mRNA from alignment at Sc0000054:56764..57789-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL97208_cuf8 ID=transcript:BL97208_cuf8|Name=transcript:BL97208_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=1026bp|location=Sequence derived from alignment at Sc0000054:56764..57789- (Branchiostoma lanceolatum)
CGAAAACAACCAATGTCACCGTCCAGTCCAGGAGTGCTGACTTTTACCAG AGAGTGACTGTGGAGGCAGGGACAGTGCAGGTCTGTAAATGCATGATCTG TCAGACACTGCTTTACTAGAAATTGAAACTGTTTATCCTGAACTTTGCTA TTTCATTTTTAGAAGAACGCTGATGAGGTTGGATTGCTTCAAGAACCATT CTTACCTAATCTTCCTTCATATTTGCTGACATTTTTTGCTTAAACATAAA AGATTTGAATCCACTATGTAGTAGATGGTCTGAAATATAATAATCCTCTT CTACAGGCCATTGCTATTCCAAAGAGGTACGAGATCCAAGGATATGCTCT GGACGCATTTGGGTTAAAGGTCACATCAGATGAAGAGATTGCGCTGTATG GACTTTACTCCAAAACATCAGCTGCCGACGGCTTCTTGGCTTATCCCCTT GACACCCTTGGAACAGAATACTATGCCGTCTGCCTGCCGCCATCAGCCTC AGAACCTTCCTTGATCACAGTCATCGGCACAGTTGATGGCACGGCAGTGT TTGTGAATGTCACTGCCCCTGCAACGTTCACTGGCATCATGTATCAACCT GGGCAGATCATCAGGTTCTTCCTGAATGCCCAACAGACGGCACAGATCCA AAGTTCTGGTGACCTCACAGGCTCCTACATCACGGTAAGTTCTGTGTCGG TTTAAACTTTTGGTAGATGAGTCACTTCAAAAGAGGTATAGAATATGTCA GATGGATCATCAAAACGTGTCTGCTGTTTGCATAGTTTGAAGATAATCTT TTGTGGAATTGTAAAAGATCTGTTATGATTTATTTAAAAGTTGATAAACA AAATGTTAGTATTGTATCTATTCTGTTAGGACTTCATACATGTAGGAGTT TTGTTGTTAAAGTTCCTCTTAAACCCCAAATCTGGCGACCTTTCTTCATT TTTGATGTCCTTTTGTTGTTTCAGGCCGATTCAGACATTGTGGTGTACAG TGGCAATAAGTTCACCCAGATTGCCG

Coding sequence (CDS) from alignment at Sc0000054:56764..57789-

>transcript:BL97208_cuf8 ID=transcript:BL97208_cuf8|Name=transcript:BL97208_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=507bp|location=Sequence derived from alignment at Sc0000054:56764..57789- (Branchiostoma lanceolatum)
AAAACAACCAATGTCACCGTCCAGTCCAGGAGTGCTGACTTTTACCAGAG
AGTGACTGTGGAGGCAGGGACAGTGCAGGCCATTGCTATTCCAAAGAGGT
ACGAGATCCAAGGATATGCTCTGGACGCATTTGGGTTAAAGGTCACATCA
GATGAAGAGATTGCGCTGTATGGACTTTACTCCAAAACATCAGCTGCCGA
CGGCTTCTTGGCTTATCCCCTTGACACCCTTGGAACAGAATACTATGCCG
TCTGCCTGCCGCCATCAGCCTCAGAACCTTCCTTGATCACAGTCATCGGC
ACAGTTGATGGCACGGCAGTGTTTGTGAATGTCACTGCCCCTGCAACGTT
CACTGGCATCATGTATCAACCTGGGCAGATCATCAGGTTCTTCCTGAATG
CCCAACAGACGGCACAGATCCAAAGTTCTGGTGACCTCACAGGCTCCTAC
ATCACGGCCGATTCAGACATTGTGGTGTACAGTGGCAATAAGTTCACCCA
GATTGCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL97208gene:BL97208Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL97208_cuf8transcript:BL97208_cuf8-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL97208_cuf8-E1BL97208_cuf8-E1-1564476830-232684Branchiostoma lanceolatumexon
BL97208_cuf8-E2BL97208_cuf8-E2-1564476830-232681Branchiostoma lanceolatumexon
BL97208_cuf8-E3BL97208_cuf8-E3-1564476830-232679Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000054genomeSc0000054:56764..57789 -
Properties
Property NameValue
Transcript idBL97208_cuf8
Biotypeprotein_coding