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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97235_cuf11 >transcript:BL97235_cuf11-protein ID=transcript:BL97235_cuf11-protein|Name=transcript:BL97235_cuf11|organism=Branchiostoma lanceolatum|type=polypeptide|length=191bp
MSEPNISAVLLEKGNLKLEERPIPKPGKNEVQIAMHSVGICGSDVHFWTD
GAIGPFVVKAPMVLGHEASGTVSELGEGVTHLKVGDRVAIEPGVPCRYCS
ACKGGRYNLCPDVKFCATPPVDGSLCRYYVHPADLCFKLPDNVSYEEGAL
LEPLSVGVHACRRSEVTIGSKVFICGAGPIGLVCLQVAKAR Run BLAST on NCBI mRNA from alignment at Sc0000002:4205060..4208306+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97235_cuf11 ID=transcript:BL97235_cuf11|Name=transcript:BL97235_cuf11|organism=Branchiostoma lanceolatum|type=mRNA|length=3247bp|location=Sequence derived from alignment at Sc0000002:4205060..4208306+ (Branchiostoma lanceolatum)
CCGGTGACAAGGCAGACCCCAAACAACCGACGAGTACAAACTCGGTCATA
CGTTTACAGGATCCGCAACAACAACGACCGACGGTGTCTCAAAAATGAGC
GAACCTAATATCTCCGCGGTTCTTTTGGAAAAAGGCAACCTAAAACTGGT
GAGTTTGAATGATCTTAGAGTACAATAAACGATGTACAAAACGAAGTAGC
ATTTTATAAAGGGGCGGGGCAAAACGAGTTCGCTTGTTGTGCATGTATAT
GCTCTATGACTTACATAACACTCGAGTAGATACGCCAACAATAGCAACTT
TTTAAATCTCAGCCTTGTCTGTGACAATATCCACAATTGCTGCTGATAGT
CGGAATCCTTTGAAAATGTTAAATCTGTAAAGCAGAGTTGTTGTTCTCAG
TTACACTGAGTTGAGCAAAGTTCACGTCAAGTGACAAAGTGCAAAGTCTA
ACCTTTCGATGATTGGCTTTAATGTGTACTACTTTTATTCTGCAGGAAGA
GAGGCCTATTCCCAAACCTGGAAAGAATGGTGAGCAAAGTCAAGTATCAC
TCACTCACTCATGACCCATGGCCTCAGTGGTCGTAGCCGTAGAGGCGTCA
TGACAAGTATTCTCCAAGCAGAGGCTTCGATCGAGAGGGGTAGTTTTGTC
CGGGATTTCTAACGTTCCTCTCCTCTTAGAAATCCCGGACAAAACTACCC
CTCTCGATCGAAGCCTCTGCTTGGAGAATAATAACAAGTATACGTCTGCA
GTAAGAATTAGTTTCAAAATTTTATCCAGGTTCTTGGGTAACTATTTTTT
GGCGTACTTCTACAATAATTTAAAAAGCTATGGATGTTTTTCTTGGCACT
GCAGCAGAGCATCCGGTCTTTGCAATAATGGCCGCTTCTGCCCTTGACTG
CCCCCCTTTAAAGGAGTCCTTAAGTCCAGAAGGGGGAGTTATTTTCCAAT
AGATGATAATTTCAGGAAGTGAAAATGAATACTTTTTACAGTATACGATA
AAGTACCCACTAGTCCCGTGCGCATCAAAAAGCATTCAGTATTTTACCGA
ATTCCCCAGGTGACCCTCTATTTTCTGATTGATTATATTAAACAACCTCA
GCCTGTGGCTTATTACAATGTGCCTGACAAGGCCTGACAAAAGTTGGGTT
ACAAACCATTTTATTATATACTTGACTCAATCTACAGAGGTCCAAATCGC
GATGCACTCGGTTGGCATCTGCGGCTCTGATGTCCACTTCTGGACGGACG
GCGCGATCGGACCGTTCGTGGTCAAGGCCCCCATGGTCCTGGGACACGAG
GCCAGCGGCACGGTGTCCGAGCTGGGGGAGGGCGTCACTCACCTGAAAGT
CGGTAAGGAACCTTTTTTGCTGAATAGACCTCTATCCAGTTACGGCGGCC
ATTTTGAATTTCCAGGGGTCAGCTGGGGGTCATGCATCAAAGTGAGGCTC
AGGGTGTACCGGGTTAAGCCGTTCTATGGTATAACATAGGTATGCCGTAA
CTGGAAAGAGGTCTATTGATGTACTTTGCCAAAAGGGGTATGTTTTCGGG
AGCGTTCGTGTTTTTCCCATTGACATAAGCTTAATTCAGAATCCTCTCCG
AGTACTATAACCATCTGTCTATATAGACTAGATTTGATCGGTCCCTGAGT
GGTCTTCCTCTACAGTTTTGACTGTACTTTTCTCTACCTTCTTCTTGTCT
ATATCTACCCGTACATATTGTAAGGGATTACATTCGTAATTTCTGATGGT
GGCGTAAAGCCATCGGTCCCGTATATGAGGGAGCCTCAGGCATAGATCTA
AAGCGTACAACATCTGCACATAAAAGAACCCAACACACTTATCGAGAAGA
GGCTTTTTGGCTGAAGTGCGAGCCGTAGCGAAGCCGCATTGCACTGTAGC
TACTACCAGTCACTTGAAAAGTATTACACCTCACCTCAGTGGAAAATGAC
TGCCTTACCTTTACCTGTACCTGCCCAGGTGATCGTGTAGCGATCGAGCC
AGGTGTGCCGTGCAGGTATTGTTCCGCCTGTAAGGGAGGCAGGTACAACC
TGTGCCCGGATGTGAAGTTCTGTGCTACGCCGCCTGTCGACGGCTCGCTG
TGCAGGTACTACGTACACCCGGCCGACCTATGCTTCAAGTAAGTTCACAC
TACTACAAAAACAACTTGTTTGTTTGTTTGTTTGTTTTACTTCTTACTTC
TTTTCCTTGCTTAGGTTCATTTTCAATAATCTCTTAGCTGTCTCGAGTAC
TCTATTGATAAAACCGATATAGTTATGAGGCGACTATGGAAAACTCTGGA
CTTCCGCATAGTACAAAAATAAATTGTTTGTTTTACTTCACAATCCTATC
CTTGCTTAGGGTCATCTTCAATAATTTCTGAGCTATTTTCAAGTTAAGTA
CTCTATGGAGAAAACATGATGCACATGTGAGAAACTCTGGACTTGGGTCA
AATTTTATTTTCTTGCCACCTGTCCTGGACCATTCTGGCACATTTGACCT
ATAAGTGTGGACATGGCCAGCATCCAAAAATTAATTCCAACTGCGGAACT
GTGACAAAACTTTCCTGTAGACGCACACCATTAAGCACAAACAAAAACAA
ACGAACAAACAAGCTAATGCATCGCAAACAAACAAACCGACCACAGAACC
TCCTTTTTCACGGAGGTACATAAAAGTGCACGTCTTATTCTAGCTAATGC
CTTCATACCAAAGTAAAATAAAAATATGTTTCAGACTCCCCGACAACGTG
AGTTACGAGGAAGGTGCTCTGCTTGAACCTCTTTCTGTGGGTGTGCACGC
CTGCAGGAGGTCAGAGGTCACTATTGGCAGCAAGGTGTTCATCTGTGGTG
CAGGTACTGTGTCTAATAATGTTTGTGTTGTTAGCTGAGATTGACTTATA
TCTCTCCATATGATCGTACTATGCTGGTGGGAACGTAAATATTTATTGCA
ATCTCAGTACAAAGTCCTTTTGTAGGGCTTACAAATGTATGTACATATAC
TTTGTGAGAAACGAAAACCTTGTTCTGAGTTTTATGGATGGCATTTTGTT
TCTTTTATTTCTGTGTACTGCAATATGATGAAACCAGCTCGCCCGACGTA
CCTGAGAGGCTAGTGTGTTATGCCGAAGGGCAGCTATATAGGGATTTATA
GGTATGATAGATACAGATCCAGATGCAGGTATAATCTGTTGCTGTTCTGT
TTCAGGTCCCATAGGGCTGGTGTGCCTCCAAGTGGCCAAGGCCAGGG Coding sequence (CDS) from alignment at Sc0000002:4205060..4208306+ >transcript:BL97235_cuf11 ID=transcript:BL97235_cuf11|Name=transcript:BL97235_cuf11|organism=Branchiostoma lanceolatum|type=CDS|length=573bp|location=Sequence derived from alignment at Sc0000002:4205060..4208306+ (Branchiostoma lanceolatum)
ATGAGCGAACCTAATATCTCCGCGGTTCTTTTGGAAAAAGGCAACCTAAA
ACTGGAAGAGAGGCCTATTCCCAAACCTGGAAAGAATGAGGTCCAAATCG
CGATGCACTCGGTTGGCATCTGCGGCTCTGATGTCCACTTCTGGACGGAC
GGCGCGATCGGACCGTTCGTGGTCAAGGCCCCCATGGTCCTGGGACACGA
GGCCAGCGGCACGGTGTCCGAGCTGGGGGAGGGCGTCACTCACCTGAAAG
TCGGTGATCGTGTAGCGATCGAGCCAGGTGTGCCGTGCAGGTATTGTTCC
GCCTGTAAGGGAGGCAGGTACAACCTGTGCCCGGATGTGAAGTTCTGTGC
TACGCCGCCTGTCGACGGCTCGCTGTGCAGGTACTACGTACACCCGGCCG
ACCTATGCTTCAAACTCCCCGACAACGTGAGTTACGAGGAAGGTGCTCTG
CTTGAACCTCTTTCTGTGGGTGTGCACGCCTGCAGGAGGTCAGAGGTCAC
TATTGGCAGCAAGGTGTTCATCTGTGGTGCAGGTCCCATAGGGCTGGTGT
GCCTCCAAGTGGCCAAGGCCAGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:4205060..4208306 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97235_cuf11 |
| Biotype | protein_coding |
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