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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97268_cuf1 >transcript:BL97268_cuf1-protein ID=transcript:BL97268_cuf1-protein|Name=transcript:BL97268_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=593bp
CKRSYKHWIQPGSSINTIELNFKTTEPNNLLFYLEGKAVRDFLSLETRDS
RVIFHWNIGSGIGTIEYDTLSISDDRWYRIVAKRVGRSGELRVQLSSAKD
DAPSVTGFAPEGYTILDVDDEYGIDDPQFYLGTVDLYFYLGGVPAEKQQD
LAARQILSSDFNGCLGEVLLDDKPIGLYNFATTSGTCMGCVESPRKSTAS
NTYTFLRDGFVVMPKTRSWNDRNTNLNFNFKTFAEDALIFFVADEAQGDY
FAVYLKDGRVGVQFNLGSGKVEILSDDRYSTGDWTYVRVSRTGQRAELTV
VDDQTVKVGSSPGSLKDLAVTDRMYIGGVPGSFRVLPPDIPTTSLIGCLQ
DVTVGRDPQKLDENLESLGMTPGCPDQVVRTIGMSGEPGAYAALPKTNQE
GDLVDGGSVFLGFTTSTEDGLLLLATGGGRRRRQARTAFYSLSIVKGRIQ
AWFSAGEGSPLTLVTRNSAGRFDDGEDHNIRVTRAGDRFEISIDDGAKRS
GKLADADKKVISVNKLYVGGIPGNMERNFRNMAGTLAPFKGCIRDLVLNG
NLINMGDMVEFNKADIGFCVVPNLPQVTPTVTMITPEVSGITL Run BLAST on NCBI mRNA from alignment at Sc0000002:2032831..2040904- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97268_cuf1 ID=transcript:BL97268_cuf1|Name=transcript:BL97268_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=8074bp|location=Sequence derived from alignment at Sc0000002:2032831..2040904- (Branchiostoma lanceolatum)
TGCAAACGGTCCTACAAACACTGGATCCAGCCTGGATCGTCCATTAACAC
CATTGAGTTGAACTTCAAGACAACGGAGCCCAACAACCTTCTCTTCTACC
TGGAAGGCAAGGCTGTAGTAAGTATACTGGCTATTTTTTGGTATCCCTTA
GGCCACACCGATTTACTTTCTTGGTTAGCGGATTTTTAAAATGTTTTTAG
CACGAGGCCATCATTAAAACAGAAGGCTGGGGCGAAAACTTGCACCTGAC
CCTGTTCACTCCCTGATACTGTGTGCACCAAAGTACAAACTTTCCTCTGA
GATTCTGTTTTCATGTTGATTTTCCAATCTAGCATTTAAAAAAATTCTGT
TAACCAAGAAATTAAATTGGTGGGGCCTGGACATCTTGTTTTATTTCCTC
TGGTCCATTTATGAAGGTTAGACATCCAGCTAAAACAATATCTATTTACA
AACAAATCAATCTTTGAATCTGGATTAGATACGAAGATTACTTCAAGAAC
GTTGAATGACATCCATCACTCTTCTTCAGGGTCACTAGAATGAGCTGGCA
GAACAAATCGATAATAGTACATAGAACGTATTCACTCACTCTCTCCCATA
GCTTAGTCAGCCATAGGGGCAGCATAGCATTCAGAATGTATTACTAACTG
GAAAAAAAACAGTTGAGCATGTCAAAGTCATTAACTCGTATTGTGATGAC
AAATACTGACTAGACTGTTTGAAAGCTTCCGACACTCTACCACCAAGTGT
TTACATGTAGCTCTTCTGAGTTTTTATTGGTCCCTAGGGAATGGGCTACC
TTGAACAGAGCCAGAAGCAAAGTTGATAAAACTAGAGATGACCTCCTAAA
ATTGGGACGGGTAAATTCAAGTGTCAATGTGGTCATCTTGACTATGGGAC
ACATGCGAGTCCGAACTGGGCCCAAATGTCACCAGTCAAGACCTATATGA
AGCTTGCCAAGAAGCCCAAAACTTGTTACTGGTAACAGCACGACAAGATA
TGATGATGATGATAGTAGTAATGATTTACGACAGACATAACTTTAGACTT
ACGATGGACCTTGATGCTCTTTTATCATGTGTTTTGTGGTCTGCATCCAA
AAGATGTTCTCTTTGGTAAATAATTACCTCAGTCATTTCTTTTTACCTGC
AGAGAGACTTCTTGTCTTTGGAGACTCGTGACAGCAGAGTAATTTTCCAC
TGGAACATTGGCTCAGGTATTGGCACCATCGAATACGACACGCTGTCTAT
ATCTGACGACAGGTGGTACCGTATTGTTGCTAAGCGCGTTGGCAGAAGTG
GAGAACTACGTGTACAACTCTCGAGTGCTAAAGACGACGCTCCGTCTGTG
ACCGGCTTTGCTCCAGAGGGGTACACCATTCTTGATGTAGATGACGAATA
TGGCATCGATGACCCCCAATTCTACCTAGGCACCGTTGACCTCTACTTCT
ATTTGGGGGGTGTTCCAGCAGAGAAGCAGGTAGGGCACAAATTAAACTTT
GTAGCTGGAATTCAAAGTAGTTCTGGCACAAAGTTAGATCTGTTAATGAA
TAAATGAACACCTTTATTGTACACATATACCACAAATAAACAGACAAACA
CACTGGGTTAAGTACACTGGCCACAACAAAAGAATAGTTTACAGATACCT
GACATTGTCAATTTTCTGCAAGAATAATAATTGGTAATCGATTGATGCCT
TCTTGAGTTTCACATACCCAGACACACACACAAAAAAACATAACCTAATG
GCAGGCTCCTTAAGGTGAAGAAAGTAACACTCTTCATGAAGGTAAATATC
ATAACTATGGAACATGAGTTGGAGAAAGGGATCCTTCCATACTAGGCCTT
ACTATCTTGCTTTAAATTGTCAGCCTACAATATAACTTCATGTTGAAATG
TATGCTTCTTACAAATGCGCCACCGCATATTTTGGAAGGAATGTTTAAAG
CCTTCAAGAATTTGAATATGCACAACATTGTTGAAGAAGAATAGGTCGAC
ACTCCTTTTAAACATGAATATCTACGACTCTTCATTACAGCAAGACCTGG
CAGCCCGACAAATCTTATCTTCTGATTTCAATGGCTGCCTGGGAGAAGTG
CTGCTCGATGACAAACCCATCGGCCTCTACAACTTTGCCACCACATCTGG
GACCTGCATGGGCTGTGTGGAAAGGTAAGGTAAGATAGTTTGTTAAAGGA
GACCCTAACAATATTAGGACCCGAAAATCGGATTTTGAAAGTCAATTTAT
TTTGTCATTGATAAGTTCAAACAACACTATCACTTACTAGTTGGTATATC
TGCCAGTTAATTGGTCATCTGGGTCTGTATCTATGTACAGAATACAGTAT
TTACTAAATATGCCTGCCTAACTGTTCTTTTATAGATACAGTTTATCTAT
AAAGTCTACTTTGAATATGATTTTATTTTATTTTATTTTCCATCATATCT
GTTGCCCAGCTCAGTGATTATCATCGCTTTGCAGTGGGACCCATGATAAG
TTTTATTTCTGCCATTTAGGCGGCCATATTTGCTTATTAAAGGCAACCAA
AGCAATAGTAGTGCCCAAAAAATGGAAATAAAATAATGCTGAAATCTTTA
TGATAGTGAGATTTACTAAGTGAGATTTAGCACATTTCATACTAAGTAGA
AGTAGTGACTGCATATTTTGAGCATTTTAAAACCGCGCAAAAATGTGCCG
TATGATGATCCCCTTAGTTTCGTGAGCCTACAAAAACGCCGGGGATGATT
TTCAGTGTGTTCTCACATCATAACGACAGCATATTTTTGCATCATGGACT
AATCATGTATAGAAATGACTAAATGAATAGACTTTCAAAATTTTTGGGCC
CTGATACTGCTTGGGTTTCCTTTAAGTTATATTATAGTCTGTTCCCTTAT
TCTAATGTTTCTTTCTCTTTATAAAACTGGCAGCCCACGGAAATCGACTG
CTTCCAACACCTACACTTTCCTACGAGACGGATTTGTTGTGATGCCGAAG
ACACGATCATGGAATGACAGGAATACTAACCTCAACTTCAACTTCAAGAC
CTTTGCAGAAGACGCACTTATCTTCTTTGTTGCTGATGAAGCCCAGGTCT
GTGTCACAAAACTATCAACATAGTTTACTGATGCTGTTCAGTAGTGTAGT
AGAAGTAGTACTACAGTAACTGTTACTGTAGTATCCAGATTATACTGCTG
CTGGTGTCACTGACACTGCATGGGATGGGCAGCAGTTGGCTAGTCTTCAC
ACTGGGTCCACACTGGTGTCACAAAACTATCAACCTGTAGAGAAGGTTGA
GTTTACTGGTGCTGTACAGTAGCATAGAAGTAGTAGGCAGTATCGTAGTA
GTAGATGTAGTAGTATCTAGTAGTTGATTATACTGCTGTGAGTGTCCCCG
ACACTGGGGTGGGCAGCAGTCGGCTAGTCTTCACACTGTGGTTCCACACT
AGTACTTTGATGTCCTTCTTGACACAATCCATCCAAGATTTCCAAAGTCT
ACCACGACCTCTGTATCCTGTCAACTACAACTTGGTGATTGTGTTGATGC
AGCTACATGTACATGCTCGTTCAACATGTCTGTACCAACCGCAGCACTTG
GTTAGATTTTAGATAGCTAGTAGCTAAGACCACTGCCACAAGACGTGTAC
AACATCAGTTTAGTTTGGTGACAGTAAATGAACTGTGCACATGTTTTGTT
ACAGGGAGACTACTTTGCTGTCTACTTGAAGGACGGTAGAGTTGGAGTCC
AGTTCAACTTGGGTAGTGGAAAAGTGGAGATTCTCTCCGATGACAGGTAC
AGCACTGGAGACTGGACCTACGTACGCGTCTCCAGGACAGGCCAAAGAGG
TGAGCTTTTCATATTACCCTCTTCTCCATAATACACAGATCCTTTTGTAT
CTGTGTAGCCAGATCTTAAATGTTAGCTACTGTTGTTGCCATTTTGAAGA
CATAACTTTTCTCTTACCTCAAGGCTTTGTTAAAAGCAACCAAAGGAATA
TTAAGGATAAAAAAATTTAAATAAAAAAATTCTGAAATCTTTATGGTAGT
GACATATACTAAACGCTGTTTAGCACATTTGTGTATTATTACTAATAACT
TCATACTTTAAGCATCTTAAAACCGTGCAAAAACATGCCGTACGATGATC
CCCTTTGTTTCGCGAGCCTACAAAAACCCCGGCGACAATTTTCGGTGAGT
TCTCACATCACAACGATGTCATATTTTTGCATCATCGACGTCGCTGTACA
TTGTGATAGTGTTGGTTGAACTTATCATGTATAGAAATGACTAGATAAAT
TGACTTTCACAATCCGATTTTCAAGCCATAATATTGCTTGGGTTTCCCTT
GGGTTACCCTAGCTTTAAGGTCAACAAAAGTTGAAGACTCTTTTTTATTT
TTGTAGTACATACGAGTGTCTACAGATTTAAAGAATGGGTGTCAAGAAAT
TTGTTATTCTGGGATGACATAAAAGACTTACCAATCTCTGTAGCTGACTA
TGTATCGTATTTCAGCTGAGCTGACTGTGGTGGATGACCAAACTGTCAAA
GTTGGGTCCTCCCCTGGGTCCCTTAAAGACCTTGCCGTCACCGACCGCAT
GTATATTGGAGGCGTGCCTGGAAGCTTTAGGGTGTTGTAAGTATAAGCTA
GTTCACGGTTCAAAGTTCAAAGTTCAACTCTTCATGCACAGTGTGATACA
CTTTGGATAATATGTCAAAGTTGAAGGTCACTGAGACATAAACAAAACAC
TTCTCATGTTCTGGACATGTATCAAGCATGGGCTGTAGACAGGTTAGGGG
ACTTCACCTTTGACCTTGTGGATGTGTAGTGCAAACCGTGGACTGTCTTA
TTATTCTCGCACTCGGCAAGATTCAGTCAGTCACTTTCAAATTCTTATCG
CAGTAAAGCAGTTGAACCTCAGACTGAAGACAAAGTATGGAGCTTTTTCG
TTTAGCGGCTTTGCAACGGCGTATTCTTGGCTAGGTACACCGAGTCACCA
GACTCTTCTCTACAAGTGTATTGGGTTCTTTTACTCCCATATTTCTGAGG
TACTAAGATGAAGGGATTTCTCTTCTGTCCATGCACAGGCCGCCAGATAT
CCCGACTACTTCCCTTATTGGTTGTCTGCAGGACGTTACAGTGGGGAGGG
ATCCTCAGAAGCTGGACGAGAATCTGGAAAGTTTGGGCATGACGCCTGGC
TGTCCAGATCAAGTAAGGGATGCTTAAGAATTTATATCATACCCGGGCCG
CAATGACCTTTGATACGGGTGTTTGGACCAATCCATACTGAATGGTATGG
CCAGGGATTTTCTAGTTCGATTTGAACGATTGAAACTTGCTTCAAGTCTG
CCGGTTGGAAATTTGAATACCGGATTTAGACGTTGGAATCTCTCAACTTT
TGATGTACTTCAAATTGAAATGTGTTTTTTTTTCGGGTGGGTATGACAGT
CATACAATGTACATATAATACAACACGGTGTATTCCGCATTGGCCTTTAT
CATTATTCCAGAATGATTTAATGTGTAACAACCTAACAGAAAGGTCACAA
TTAATAGCCTGAGTACCAGCCTCCTTAGTGACCGCTGGCTAAAAAAAAAT
CGCAGGCTAACCACAATTTTTTTTCGAGCCAGCGGTCACTACGGAGGCTG
GTACTCAGGCTATTAATTGTGACCTTTCTGTTAGGTTGTTCGAACCATTG
GTATGTCTGGTGAGCCAGGTGCCTATGCAGCCCTTCCAAAGACAAATCAA
GAAGGTGACTTGGTCGATGGAGGGTCGGTGTTCCTTGGGTTCACAACGAG
CACGGAAGACGGACTGTTGCTCCTGGCAACCGGTGGCGGCCGCAGGAGAC
GACAGGCAAGAACGGTAGGAACTACATTTATCTACGTCCAACTAAGACCT
CGGAAATAATGTATTTCAAGTCTTTTTGGGGGTCGAATGCTGTACGGTAC
TCACTCTTGCTAATCTTTACTTTTCCTGTGCACCCGTAGGCTTTCTACTC
TTTGTCCATCGTGAAGGGCCGTATCCAAGCATGGTTCAGTGCTGGAGAGG
GTAGTCCATTAACCTTAGTAACAAGGAACAGCGCTGGTAGGTTTGATGAT
GGAGAGGACCACAACATAAGGGTGACAAGGGCAGGTGACAGGTCAGTTGG
TCGTCATGACACACATTGGCTTTTCGGCAGGGGAATATACTTAGTTTACT
GTAACATTAAACTAAGTACATTCCAGGATTACTTATTATGTGACAGTTAT
ATCAGGCATACACATGTATCTGGTTCTATTTATGACATGTATTTTTAAAA
TTTGTTGATAAATTCTGTAGATTCAGTTGTTTTAACTCTGGTATGAATAA
GTTACATTTTTTACCTTATATCATTTTTGTGAGATGGTATTATGACCTAC
ATGTAGTTGTTGTTTATATTTAACAAATTTTAATAACCCTGTTTTATGAT
GCATAACTTTTGCGTTCATGATGTTCCAACTATCAGTGTTTGATTTCACT
ATTTGAGTTCATATTGTTCTTAACATGTAATTTTCATTTTCATGCAATAC
TTGATTCATTTCATTTACACTGTAATTATTTATATTAGTTTGTTGGGTGG
CCTACATATAAGCTTGGAAGCTGTTGTCTTCCCTTGAAAAGTTGTATTTA
TTCATCATTTTAATTATCATTTTTTGCTTATTGACTGTCATTGTTATGTT
GTCCATATTTTCACCCCTTCTATCTCCAGGTTTGAGATCTCCATAGACGA
TGGCGCCAAACGATCAGGAAAACTTGCAGATGCGGACAAAAAAGTCATAT
CCGTTAACAAGTTGTACGTCGGTGGTATTCCTGGCAACATGGAGAGGAAT
TTCCGCAACATGGCAGGCACTCTGGCTCCATTCAAGGGCTGCATAAGGGA
CCTGGTTCTGAATGGAAAGTAAGTGCTGTTTTTAAGTTTAGACTATGATG
TGTTGCTTTTAGATTGCTAAATCCACACAAGAAGAATATTGATGATAAGA
AACTAGCTAGTTACTTGCACTGCAGTACTGTGTAATGTTCAGTAAATCCT
GTAACAAGTTAGTAGTTAAAGTGCTTTTGACACTGATCAGAATACATTTT
CCGATTACATTCAACCATGATAGTATTATTTAATGAACAATTTGTTACAA
AATAAACACCCTTTTGATGTTATTAAACATCGAAGCTTGCAGATCATAAT
TCCAGTTCTTGATTCCAGTGCCTGAGGTAATTTAAGTTCCTTCCATGACG
TCACAGTGAACATTTCAGCCAGTTCAGTACCTGGCACTGTGGCTTGTTCA
AAACATTCTTTTAAGATGCAGTCAGTGCATAATCATCTTGATAAATAGAT
AAAAAATTGCAAGATATTTTTTGGCGAGCCACAGTGCCAGGTACTGAACT
GGCTGTTCCCTGTAATGTCATAGATTATTGGTATCACAAGCCTTTAATAC
AGTATACAGTGAACATTGTAGACAACCTCATTGTAGGTATGATCTACCCT
AAACCTTGGTGAATAGCCAGTGGCCCATACTCTGGAAGTATTTAAAAAAG
AACAGGACTGGTGTATATGTGTCCTTGTAGACCAACCCCCTTGCCAAGCC
TGTTAAGCCCCCCTCATACTGGATCTGCATTAGGTTGGCGACCTCGCTGC
GTCCGAGTGATTTGACACCGCGCTAAACAAAATTTATCGATGGATCTTTT
TACGCTTTGTTTGATTTGTTGTCTTTTTAGTTGACATATTTGTATGTTTT
GCATGGTATTCCTATTGTAAAGTCAAGGCTAACTCACATTCAATCTGGGA
TGCAGCGAGGTCGCCGACGCATTGCGGGTCCAGTGAGAGGGGGACATAAG
TGTAAAACATTTTTGCTAAGAGTGATCTATGACTTACCTGTCAGATATCA
GCAATGTTTTGTTAAATGTATTTGTTGTTCTTCATTATTTCCTTCAGCCT
AATCAACATGGGAGACATGGTAGAGTTTAACAAGGCAGACATCGGGTTTT
GTGTCGTACCCAACCTCCCACAGGTCACCCCCACTGTGACCATGATCACT
CCAGAAGTCAGCGGCATCACTCTG Coding sequence (CDS) from alignment at Sc0000002:2032831..2040904- >transcript:BL97268_cuf1 ID=transcript:BL97268_cuf1|Name=transcript:BL97268_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1779bp|location=Sequence derived from alignment at Sc0000002:2032831..2040904- (Branchiostoma lanceolatum)
TGCAAACGGTCCTACAAACACTGGATCCAGCCTGGATCGTCCATTAACAC
CATTGAGTTGAACTTCAAGACAACGGAGCCCAACAACCTTCTCTTCTACC
TGGAAGGCAAGGCTGTAAGAGACTTCTTGTCTTTGGAGACTCGTGACAGC
AGAGTAATTTTCCACTGGAACATTGGCTCAGGTATTGGCACCATCGAATA
CGACACGCTGTCTATATCTGACGACAGGTGGTACCGTATTGTTGCTAAGC
GCGTTGGCAGAAGTGGAGAACTACGTGTACAACTCTCGAGTGCTAAAGAC
GACGCTCCGTCTGTGACCGGCTTTGCTCCAGAGGGGTACACCATTCTTGA
TGTAGATGACGAATATGGCATCGATGACCCCCAATTCTACCTAGGCACCG
TTGACCTCTACTTCTATTTGGGGGGTGTTCCAGCAGAGAAGCAGCAAGAC
CTGGCAGCCCGACAAATCTTATCTTCTGATTTCAATGGCTGCCTGGGAGA
AGTGCTGCTCGATGACAAACCCATCGGCCTCTACAACTTTGCCACCACAT
CTGGGACCTGCATGGGCTGTGTGGAAAGCCCACGGAAATCGACTGCTTCC
AACACCTACACTTTCCTACGAGACGGATTTGTTGTGATGCCGAAGACACG
ATCATGGAATGACAGGAATACTAACCTCAACTTCAACTTCAAGACCTTTG
CAGAAGACGCACTTATCTTCTTTGTTGCTGATGAAGCCCAGGGAGACTAC
TTTGCTGTCTACTTGAAGGACGGTAGAGTTGGAGTCCAGTTCAACTTGGG
TAGTGGAAAAGTGGAGATTCTCTCCGATGACAGGTACAGCACTGGAGACT
GGACCTACGTACGCGTCTCCAGGACAGGCCAAAGAGCTGAGCTGACTGTG
GTGGATGACCAAACTGTCAAAGTTGGGTCCTCCCCTGGGTCCCTTAAAGA
CCTTGCCGTCACCGACCGCATGTATATTGGAGGCGTGCCTGGAAGCTTTA
GGGTGTTGCCGCCAGATATCCCGACTACTTCCCTTATTGGTTGTCTGCAG
GACGTTACAGTGGGGAGGGATCCTCAGAAGCTGGACGAGAATCTGGAAAG
TTTGGGCATGACGCCTGGCTGTCCAGATCAAGTTGTTCGAACCATTGGTA
TGTCTGGTGAGCCAGGTGCCTATGCAGCCCTTCCAAAGACAAATCAAGAA
GGTGACTTGGTCGATGGAGGGTCGGTGTTCCTTGGGTTCACAACGAGCAC
GGAAGACGGACTGTTGCTCCTGGCAACCGGTGGCGGCCGCAGGAGACGAC
AGGCAAGAACGGCTTTCTACTCTTTGTCCATCGTGAAGGGCCGTATCCAA
GCATGGTTCAGTGCTGGAGAGGGTAGTCCATTAACCTTAGTAACAAGGAA
CAGCGCTGGTAGGTTTGATGATGGAGAGGACCACAACATAAGGGTGACAA
GGGCAGGTGACAGGTTTGAGATCTCCATAGACGATGGCGCCAAACGATCA
GGAAAACTTGCAGATGCGGACAAAAAAGTCATATCCGTTAACAAGTTGTA
CGTCGGTGGTATTCCTGGCAACATGGAGAGGAATTTCCGCAACATGGCAG
GCACTCTGGCTCCATTCAAGGGCTGCATAAGGGACCTGGTTCTGAATGGA
AACCTAATCAACATGGGAGACATGGTAGAGTTTAACAAGGCAGACATCGG
GTTTTGTGTCGTACCCAACCTCCCACAGGTCACCCCCACTGTGACCATGA
TCACTCCAGAAGTCAGCGGCATCACTCTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:2032831..2040904 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97268_cuf1 |
| Biotype | protein_coding |
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