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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97316_cuf2 >transcript:BL97316_cuf2-protein ID=transcript:BL97316_cuf2-protein|Name=transcript:BL97316_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=426bp
VDDCGSSRCNHGACIDLHNNYTCMCDPGWTDLIIHYEDIDCECNTTVSVN
STDGENYTCTCDGGWNRTYCSLEIDECSSNPCLHGVCTDELARYVCSCEA
GWEGETCDKEISNDCASDPCGLHGTCTDGLGAYTCTCEKGWTGINCEKGP
PTYSFQLTMDNREFTDQLSDPTSETFTSLASEVSRTIWACLNQTSVGSDI
INVVISSFRPGSVIVDYDVHFRQNTSVAGTEVQEAFVSFLRNNTGFGDAL
GIQVESICMIGNGSSTCVPTPPQEWQSWVTYTIVGCVAAVLLLVCCLFVV
VKSQRNRQWSWRLKKEYDQFDPYGSRRSSMESRQRKVTNPIYEGQGPSTA
YELNDAGLTDFEESGLTELQVGGLTDTEDGGSTDFHSDGGSTELQDVGST
GFEEGVLTEFQDLDLTEGEESQDGMC Run BLAST on NCBI mRNA from alignment at Sc0000129:748905..753082+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97316_cuf2 ID=transcript:BL97316_cuf2|Name=transcript:BL97316_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=4178bp|location=Sequence derived from alignment at Sc0000129:748905..753082+ (Branchiostoma lanceolatum)
TGTTGACGACTGCGGCTCCAGCCGCTGTAACCATGGTGCCTGCATAGATC
TCCACAATAATTACACTTGTATGTGCGACCCGGGGTGGACAGACTTAATC
ATCCACTATGAAGGTAGGATATCATTCTAATATCAAACTTCAGTAACTAA
ATAAATCTAAATCATATGTAGCATTTTCAGAGTACACAATCGCTAAAGAT
ATGTGTAACAAAAAAATGACTATAAAATCACTCTTCCCTACTCCAACGCT
GTTTTACAGATATTGACTGTGAATGCAACACAACCGTGTCTGTCAACTCT
ACTGACGGTGAGAACTACACCTGTACTTGTGATGGGGGCTGGAACAGGAC
CTACTGCAGTTTAGGTATTTATTGCTACTTTGTTTTTGTTTTACGTTTTT
CTTTATATATATAATACATAGTTATTCTGACATGGAAAAATGTATGTGAC
CCTATGATATTGCCAATGTGTGCCTTCAATCAAAGATCTTCAGCGAATGC
GACTGTTTTTGACTTGCCGGCATAATCTTTCCTCTCTAGAAATCGACGAG
TGCAGCTCCAACCCCTGTCTGCATGGTGTATGTACAGATGAGTTGGCCAG
ATATGTCTGCAGTTGTGAAGCCGGCTGGGAAGGAGAAACCTGCGATAAAG
GTGTGTATTTTCTTTCAACTTACTGCAGCCAGTTGTGGTCACATTTGCAG
TACACTACAGTACATGTGCCATGGATTAAGTTCAAAAATTAAGAATGATG
TGTTCATCAATTCTTGTTCAGAAATAGCCTCATTTGCCAAGCCAGTTCAC
ATTCGTTTCTCTTACGCAATCCAGAAATATCTAACGATTGTGCCTCCGAC
CCCTGCGGCTTACACGGAACCTGCACCGACGGTCTCGGTGCTTACACCTG
CACGTGTGAAAAGGGATGGACTGGTATCAACTGTGAGAAAGGTACAGCAA
CGACTCTACTTCACCACTTAAATGCTGTCTAGTGGCCAACATTTGGCTCC
TTTGCTATACAGCTATCTGTCATCTAACTCTTTGTAGAGCATCGGTCTTC
AAGAGGCTAAATGAACATGTATTGTTTCATAATGATTAACATGTACTGTT
GTTTATAATATGTCACCCGTATTAGGTCCACCGACATATTCCTTCCAGCT
GACAATGGATAATCGAGAGTTTACCGATCAGCTGAGTGATCCGACTTCTG
AGACTTTCACTTCTCTAGCATCGGAAGTTTCAAGAACAGTAAGTCGTCCT
CATGTACAAAATATTGCAAACCTTTATATAGATGGTCTAGGCTTTCAAAA
TATTTGAGAATTTATCGATTCCAAACTGTCCGACTTGCTTGAAGTCAATT
TCTAAAAAGCTCTGAACGAAAGAAATAGAACTAACTCCAGATACTGCAGT
CTCTTGTATAAATGAAAAAGACTTTTTCTTGAACTTTTTGCCTCTACAGA
TATGGGCATGCCTGAACCAAACCTCTGTCGGCTCAGACATCATCAACGTG
GTGATAAGCAGCTTCCGTCCCGGAAGTGTTATTGTAGATTATGACGTCCA
CTTCCGTCAGAACACGTCTGTGGCAGGTACGGAAGTACAAGAAGCATTCG
TCTCTTTCTTAAGGAACAACACAGGCTTTGGCGACGCTTTAGGGATCCAG
GTTGAGTCAATGTGAGTCACCTTTAAACCTGTGTGTGTGTGTGTGTGTGT
ATGTGTTTGTGTGTGTGTGTGTGTTTGTTTGTTTGTGTGTGTGTTTGTTT
GTGTGTGTGTTTGTTTGTGTGTGTGTTTGTGTGCGTGTTTGTGTGTGTGT
GTGTGTGTCTGTGCGTGCGTGTGTGTGCGTGTGTGTGTGCGTGCGTGGAT
GGGTCTCCTACCGGCTTCTACGGTACTGCAGCGGAACTTCCGGTTTTGAT
ATCTCGTGTTCTGGATCACCTGTGTGATGGCAGTTTGTGGTGTTTTGACA
CTGTTCCTGCTTCGTAGAATACCATCATCGTATGTTTATTTGTGATTAAG
CAGCATAACTCAACAAGCTATGGGTAGATTGTAACCTAACATTTGGTATG
TGGTTAGGTATATCGAAAAATGATTCGCACATTTTGGAGTCGTAATGATA
TTTTTGTAACGTAGACGTACGGTATGTTGCAGATGTATGATTGGTAACGG
GAGCAGCACATGTGTCCCCACTCCGCCCCAGGAGTGGCAATCCTGGGTCA
CCTACACCATCGTAGGCTGTGTGGCCGCGGTCCTCCTTCTCGTGTGCTGT
CTCTTTGTTGTGGTGAAAAGTCAAAGGAAGTAAGTCGTGCCACGTGTATC
CTCACCTTCTGATCAACACACTGGTTTTTAGATATCTACTGCCCATTATA
GACATCTAAGTTCGATCGAAGTTCAATGATATCCGCTGTTGCCTGTCGTC
AGTCCAAACCTTTTTCATCTCGAGTTCTCTTTAACTGAATCATATCTAAA
TTTTAGATGATAGCAATATATAAATTAGTTATTTCTTCCGAGTGGCCTTA
TGTGCCGTTGAGGCCTTACACATTGGTACCAGTACTTTTTTCATAATCTA
CAGTTCTAGTTGAGTAAATGTTAATCATGTCTTATTTGAATGACATTCTT
TTCCTTGTTTGTGTATTACAGCAGACAATGGTCCTGGCGACTGAAGAAGG
AATATGACCAGTTTGACCCCTACGGCAGCAGACGCAGCAGCATGTGAGTC
TGATGTACCTCATTTGGTCCATACCAAACCAGTACTTCCGCATGTCTAAC
ACTTGAACATCGTACACCTTGTTTCTAACGGACGATTTAACACCCAGGAC
TGACAATTTGTTGTGGGTTCTTCACCATTAGATTGTTTCATATGCCTTAC
ACAATCAGATACGCTAGATGCGCTAGATAGTATTTAAGAAGGCTGTGTAC
TACTAGTATATATACGCCAGTACATTTTTATGACAATATTTTGACATTTC
CAGGGAAAGCCGTCAACGCAAGGTCACGAACCCCATTTACGAAGGGTAGG
TGTAAAAAAAAAATCAGTATTTCCTGTGGTCCTTCCTCCAACTGTAAACA
GTTCTAAACACAGGCACCATATCATAGCTGAACGGTTATTATCTGCAATC
ACGGTATCCTTTGTGAAAATGTGCAATGTAATCGTTTGGCAAGCAACTGA
TTCTAACGTTAAAAAGGTGAGTGTAACTTGAACGAATGCAATTATGATGT
GAACAACATCTAAACTTTCAGACAAGGCCCTTCCACCGCCTATGAACTCA
ATGACGCGGGACTAACGGATTTTGAAGAGAGCGGACTGACAGAGCTTCAA
GTCGGCGGACTGACGGACACTGAAGACGGCGGATCGACCGACTTTCACTC
GGATGGAGGATCAACAGAATTACAAGATGTCGGGTCAACAGGATTTGAAG
AGGGCGTATTGACAGAATTTCAGGATCTTGACCTGACAGAAGGAGAAGAA
TCCCAAGATGGAATGTGTTGATACGCGAGGACAGACACAGCCATCTCTGC
CCCATACCTGGTGTATCTACAAACACAAACTTTTGAAAGGTTTTACTGTG
AAAAGGAATATTACAGACACATAAAAGTCACAAAATTATAAAGCTTCATT
TTCATTGCAAACTTTGATTTCATTTCTCCCATATGCATTCACATTTCATG
TCAAACTTACTAAAGGATAGCGTCTTAGCTTTCGGCAGAAAAAAACCTGT
CCATAGATATCTCGAACCATAGGGGCAAATTACAGTGCTTGTTATAGAAA
CACTTGTAAACAAGAGTTCCACGACCTCATATCTCCATGAACAATTCTAT
TCATGCAAATGACTTACACATTTGCAAAATATATGCTTGGTCATAAACAC
CTTTATCTAACTTAAACATGTTGCAATATTGACAGTCCTGTAATTTTCCA
ATTAGATGAATTATGATGTTTTGCATTAATTATGCAAATTTGGAATTTAT
TTGCATAATCCGTATCTGTTGATGCTCCACTTTCCATAAACTACACATGT
TACATGTCTTTGAGTCTGATAAAGGAAAACACTGCAAATGTAGATTTTGC
TCATTATCTATGCAAATTAAGTCACAATTGGCATAATTTGCACTTCATTA
TGTATATCTCTGTCTAAGCTACCAGCATACTAAGTATCATATTGACAGTC
CTACAATTTTCCAATAAGATGAGATATG Coding sequence (CDS) from alignment at Sc0000129:748905..753082+ >transcript:BL97316_cuf2 ID=transcript:BL97316_cuf2|Name=transcript:BL97316_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1281bp|location=Sequence derived from alignment at Sc0000129:748905..753082+ (Branchiostoma lanceolatum)
GTTGACGACTGCGGCTCCAGCCGCTGTAACCATGGTGCCTGCATAGATCT
CCACAATAATTACACTTGTATGTGCGACCCGGGGTGGACAGACTTAATCA
TCCACTATGAAGATATTGACTGTGAATGCAACACAACCGTGTCTGTCAAC
TCTACTGACGGTGAGAACTACACCTGTACTTGTGATGGGGGCTGGAACAG
GACCTACTGCAGTTTAGAAATCGACGAGTGCAGCTCCAACCCCTGTCTGC
ATGGTGTATGTACAGATGAGTTGGCCAGATATGTCTGCAGTTGTGAAGCC
GGCTGGGAAGGAGAAACCTGCGATAAAGAAATATCTAACGATTGTGCCTC
CGACCCCTGCGGCTTACACGGAACCTGCACCGACGGTCTCGGTGCTTACA
CCTGCACGTGTGAAAAGGGATGGACTGGTATCAACTGTGAGAAAGGTCCA
CCGACATATTCCTTCCAGCTGACAATGGATAATCGAGAGTTTACCGATCA
GCTGAGTGATCCGACTTCTGAGACTTTCACTTCTCTAGCATCGGAAGTTT
CAAGAACAATATGGGCATGCCTGAACCAAACCTCTGTCGGCTCAGACATC
ATCAACGTGGTGATAAGCAGCTTCCGTCCCGGAAGTGTTATTGTAGATTA
TGACGTCCACTTCCGTCAGAACACGTCTGTGGCAGGTACGGAAGTACAAG
AAGCATTCGTCTCTTTCTTAAGGAACAACACAGGCTTTGGCGACGCTTTA
GGGATCCAGGTTGAGTCAATATGTATGATTGGTAACGGGAGCAGCACATG
TGTCCCCACTCCGCCCCAGGAGTGGCAATCCTGGGTCACCTACACCATCG
TAGGCTGTGTGGCCGCGGTCCTCCTTCTCGTGTGCTGTCTCTTTGTTGTG
GTGAAAAGTCAAAGGAACAGACAATGGTCCTGGCGACTGAAGAAGGAATA
TGACCAGTTTGACCCCTACGGCAGCAGACGCAGCAGCATGGAAAGCCGTC
AACGCAAGGTCACGAACCCCATTTACGAAGGACAAGGCCCTTCCACCGCC
TATGAACTCAATGACGCGGGACTAACGGATTTTGAAGAGAGCGGACTGAC
AGAGCTTCAAGTCGGCGGACTGACGGACACTGAAGACGGCGGATCGACCG
ACTTTCACTCGGATGGAGGATCAACAGAATTACAAGATGTCGGGTCAACA
GGATTTGAAGAGGGCGTATTGACAGAATTTCAGGATCTTGACCTGACAGA
AGGAGAAGAATCCCAAGATGGAATGTGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000129 | genome | Sc0000129:748905..753082 + |
Properties
| Property Name | Value |
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| Transcript id | BL97316_cuf2 |
| Biotype | protein_coding |
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